RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 MIS18BP1Q6P0N0 1132 aa14.49□□□□□ -0.09
LINC00643-202ENST00000553426 MRPL38Q96DV4 380 aaKnown RBP14.49□□□□□ -0.09
LINC00643-202ENST00000553426 FAM122AQ96E09 287 aa14.49□□□□□ -0.09
LINC00643-202ENST00000553426 ZNF577Q9BSK1 485 aa14.49□□□□□ -0.09
LINC00643-202ENST00000553426 TRPV2Q9Y5S1 764 aa14.49□□□□□ -0.09
LINC00643-202ENST00000553426 SMIM35A0A1B0GVV1 85 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 FAM86B1E9PN63 330 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 H3BNC9 293 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 ENPP3O14638 875 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 EPB41L2O43491 1005 aaKnown RBP14.48□□□□□ -0.09
LINC00643-202ENST00000553426 HBP1O60381 514 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 NEFLP07196 543 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 FAM86B2P0C5J1 330 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 PAK2Q13177 524 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 PDXDC2PQ6P474 469 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 FAM43BQ6ZT52 329 aaPredicted RBP14.48□□□□□ -0.09
LINC00643-202ENST00000553426 CKAP2LQ8IYA6 745 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 TRIM22Q8IYM9 498 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 ATP8B4Q8TF62 1192 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 PHKBQ93100 1093 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 RNF26Q9BY78 433 aaPredicted RBP14.48□□□□□ -0.09
LINC00643-202ENST00000553426 ZNF302Q9NR11 478 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 COL4A4P53420 1690 aaPredicted RBP14.48□□□□□ -0.09
LINC00643-202ENST00000553426 SIP14410 1827 aa14.48□□□□□ -0.09
LINC00643-202ENST00000553426 NID2Q14112 1375 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 NCOR1O75376 2440 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 RB1P06400 928 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 CD52P31358 61 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 KRT76Q01546 638 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 TMEM62Q0P6H9 643 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 BTG3Q14201 252 aaPredicted RBP14.47□□□□□ -0.09
LINC00643-202ENST00000553426 ZNF484Q5JVG2 852 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 ODR4Q5SWX8 454 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 MTHFD1LQ6UB35 978 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 ABHD15Q6UXT9 468 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 SMAP1Q8IYB5 467 aaPredicted RBP14.47□□□□□ -0.09
LINC00643-202ENST00000553426 TRAPPC12Q8WVT3 735 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 C11orf84Q9BUA3 381 aaPredicted RBP14.47□□□□□ -0.09
LINC00643-202ENST00000553426 SLC26A6Q9BXS9 759 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 AGXT2Q9BYV1 514 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 CELF4Q9BZC1 486 aaKnown RBP14.47□□□□□ -0.09
LINC00643-202ENST00000553426 UBE2ZQ9H832 354 aaPredicted RBP14.47□□□□□ -0.09
LINC00643-202ENST00000553426 RNF216Q9NWF9 866 aaPredicted RBP14.47□□□□□ -0.09
LINC00643-202ENST00000553426 CYP46A1Q9Y6A2 500 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 COL1A2P08123 1366 aa14.47□□□□□ -0.09
LINC00643-202ENST00000553426 BDP1A6H8Y1 2624 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 ADGRA3Q8IWK6 1321 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 IGKV6D-21A0A0A0MT36 114 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 CPLX1O14810 134 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 CCNE2O96020 404 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 PSAPP07602 524 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 STAG3L1P0CL83 205 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 IFNAR1P17181 557 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 KLRC1P26715 233 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 HOXD11P31277 338 aaPredicted RBP14.46□□□□□ -0.09
LINC00643-202ENST00000553426 CTNNB1P35222 781 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 PKN1Q16512 942 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 PRR16Q569H4 304 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 ZNF746Q6NUN9 644 aaPredicted RBP14.46□□□□□ -0.09
LINC00643-202ENST00000553426 SWSAP1Q6NVH7 229 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 CPLX2Q6PUV4 134 aaKnown RBP14.46□□□□□ -0.09
LINC00643-202ENST00000553426 RUFY3Q7L099 469 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 BANK1Q8NDB2 785 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 CRYGNQ8WXF5 182 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 ZBTB10Q96DT7 871 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 C22orf23Q9BZE7 217 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 LRFN2Q9ULH4 789 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 PADI3Q9ULW8 664 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 CEP131Q9UPN4 1083 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 GINS2Q9Y248 185 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 SAMM50Q9Y512 469 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 PCDHA10Q9Y5I2 948 aa14.46□□□□□ -0.09
LINC00643-202ENST00000553426 IGSF9BQ9UPX0 1349 aa14.45□□□□□ -0.1
LINC00643-202ENST00000553426 KDM3AQ9Y4C1 1321 aa14.45□□□□□ -0.1
LINC00643-202ENST00000553426 IGLV3-22A0A075B6J6 115 aa14.45□□□□□ -0.1
LINC00643-202ENST00000553426 RBAK-RBAKDNI3L0D1 243 aa14.45□□□□□ -0.1
LINC00643-202ENST00000553426 DHX15O43143 795 aaKnown RBP14.45□□□□□ -0.1
LINC00643-202ENST00000553426 PDIA3P30101 505 aaKnown RBP14.45□□□□□ -0.1
LINC00643-202ENST00000553426 BMPR1AP36894 532 aa14.45□□□□□ -0.1
LINC00643-202ENST00000553426 NLRP5P59047 1200 aa14.45□□□□□ -0.1
LINC00643-202ENST00000553426 CCT2P78371 535 aaKnown RBP14.45□□□□□ -0.1
LINC00643-202ENST00000553426 CCDC60Q8IWA6 550 aaPredicted RBP14.45□□□□□ -0.1
LINC00643-202ENST00000553426 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
LINC00643-202ENST00000553426 LMAN2LQ9H0V9 348 aa14.45□□□□□ -0.1
LINC00643-202ENST00000553426 AGO3Q9H9G7 860 aaKnown RBP14.45□□□□□ -0.1
LINC00643-202ENST00000553426 SH3GLB2Q9NR46 395 aa14.45□□□□□ -0.1
LINC00643-202ENST00000553426 COL4A6Q14031 1691 aa14.45□□□□□ -0.1
LINC00643-202ENST00000553426 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.44□□□□□ -0.1
LINC00643-202ENST00000553426 C5orf67F2Z3F1 127 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 NCK2O43639 380 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 PPFIA3O75145 1194 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 RPS6KA5O75582 802 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 KCNA5P22460 613 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 CIITAP33076 1130 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 USP11P51784 963 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 EVCP57679 992 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 SSRP1Q08945 709 aaKnown RBP14.44□□□□□ -0.1
LINC00643-202ENST00000553426 NFX1Q12986 1120 aaKnown RBP14.44□□□□□ -0.1
LINC00643-202ENST00000553426 NTRK3Q16288 839 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 PUS10Q3MIT2 529 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms