RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SCRN1Q12765 414 aa18.02■□□□□ 0.48
CDK4-215ENST00000553237 SKIV2LQ15477 1246 aaKnown RBP18.02■□□□□ 0.48
CDK4-215ENST00000553237 FBXO47Q5MNV8 452 aa18.02■□□□□ 0.48
CDK4-215ENST00000553237 CKAP2LQ8IYA6 745 aa18.02■□□□□ 0.48
CDK4-215ENST00000553237 GDPD5Q8WTR4 605 aa18.02■□□□□ 0.48
CDK4-215ENST00000553237 TOP1MTQ969P6 601 aa18.02■□□□□ 0.48
CDK4-215ENST00000553237 LENG9Q96B70 501 aa18.02■□□□□ 0.48
CDK4-215ENST00000553237 TGS1Q96RS0 853 aaKnown RBP18.02■□□□□ 0.48
CDK4-215ENST00000553237 PCDHA4Q9UN74 947 aa18.02■□□□□ 0.48
CDK4-215ENST00000553237 PRRC2BQ5JSZ5 2229 aaKnown RBP18.02■□□□□ 0.47
CDK4-215ENST00000553237 HBP1O60381 514 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 LPXNO60711 386 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 POU3F3P20264 500 aaPredicted RBP18.01■□□□□ 0.47
CDK4-215ENST00000553237 ATP4AP20648 1035 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 KLRC1P26715 233 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 ERVK-21P61565 698 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 IER5Q5VY09 327 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 ZNF746Q6NUN9 644 aaPredicted RBP18.01■□□□□ 0.47
CDK4-215ENST00000553237 MTHFD1LQ6UB35 978 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 BLIDQ8IZY5 108 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 TBCKQ8TEA7 893 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 ATP8B4Q8TF62 1192 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 YME1L1Q96TA2 773 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 C17orf80Q9BSJ5 609 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 SLKQ9H2G2 1235 aaPredicted RBP18.01■□□□□ 0.47
CDK4-215ENST00000553237 AGO3Q9H9G7 860 aaKnown RBP18.01■□□□□ 0.47
CDK4-215ENST00000553237 SUGCTQ9HAC7 445 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 THEGQ9P2T0 379 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 TCEAL9Q9UHQ7 104 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 TPCN1Q9ULQ1 816 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 MICAL3Q7RTP6 2002 aa18.01■□□□□ 0.47
CDK4-215ENST00000553237 MSH4O15457 936 aa18■□□□□ 0.47
CDK4-215ENST00000553237 PSAPP07602 524 aa18■□□□□ 0.47
CDK4-215ENST00000553237 CD52P31358 61 aa18■□□□□ 0.47
CDK4-215ENST00000553237 USP11P51784 963 aa18■□□□□ 0.47
CDK4-215ENST00000553237 HTRA4P83105 476 aaPredicted RBP18■□□□□ 0.47
CDK4-215ENST00000553237 KRT76Q01546 638 aa18■□□□□ 0.47
CDK4-215ENST00000553237 TSHZ1Q6ZSZ6 1077 aa18■□□□□ 0.47
CDK4-215ENST00000553237 GJA10Q969M2 543 aa18■□□□□ 0.47
CDK4-215ENST00000553237 GABBR1Q9UBS5 961 aa18■□□□□ 0.47
CDK4-215ENST00000553237 KCNJ14Q9UNX9 436 aa18■□□□□ 0.47
CDK4-215ENST00000553237 SAMM50Q9Y512 469 aa18■□□□□ 0.47
CDK4-215ENST00000553237 TRPV2Q9Y5S1 764 aa18■□□□□ 0.47
CDK4-215ENST00000553237 SMIM35A0A1B0GVV1 85 aa17.99■□□□□ 0.47
CDK4-215ENST00000553237 M0QZ92 97 aa17.99■□□□□ 0.47
CDK4-215ENST00000553237 ENPP3O14638 875 aa17.99■□□□□ 0.47
CDK4-215ENST00000553237 RPLP2P05387 115 aaKnown RBP17.99■□□□□ 0.47
CDK4-215ENST00000553237 ANAPC15P60006 121 aa17.99■□□□□ 0.47
CDK4-215ENST00000553237 TJAP1Q5JTD0 557 aa17.99■□□□□ 0.47
CDK4-215ENST00000553237 ZNF484Q5JVG2 852 aa17.99■□□□□ 0.47
CDK4-215ENST00000553237 SMAP1Q8IYB5 467 aaPredicted RBP17.99■□□□□ 0.47
CDK4-215ENST00000553237 ATXN2LQ8WWM7 1075 aaKnown RBP17.99■□□□□ 0.47
CDK4-215ENST00000553237 CELF4Q9BZC1 486 aaKnown RBP17.99■□□□□ 0.47
CDK4-215ENST00000553237 TSPYL2Q9H2G4 693 aaPredicted RBP17.99■□□□□ 0.47
CDK4-215ENST00000553237 GINS2Q9Y248 185 aa17.99■□□□□ 0.47
CDK4-215ENST00000553237 PCDHA10Q9Y5I2 948 aa17.99■□□□□ 0.47
CDK4-215ENST00000553237 MAFBQ9Y5Q3 323 aaPredicted RBP17.99■□□□□ 0.47
CDK4-215ENST00000553237 ZBTB42B2RXF5 422 aa17.98■□□□□ 0.47
CDK4-215ENST00000553237 M0R2N6 131 aa17.98■□□□□ 0.47
CDK4-215ENST00000553237 CHMP2AO43633 222 aa17.98■□□□□ 0.47
CDK4-215ENST00000553237 PFKFB2O60825 505 aa17.98■□□□□ 0.47
CDK4-215ENST00000553237 CDKL5O76039 1030 aa17.98■□□□□ 0.47
CDK4-215ENST00000553237 TDP2O95551 362 aa17.98■□□□□ 0.47
CDK4-215ENST00000553237 AK2P54819 239 aa17.98■□□□□ 0.47
CDK4-215ENST00000553237 NPY5RQ15761 445 aa17.98■□□□□ 0.47
CDK4-215ENST00000553237 NME8Q8N427 588 aa17.98■□□□□ 0.47
CDK4-215ENST00000553237 FBXO22Q8NEZ5 403 aa17.98■□□□□ 0.47
CDK4-215ENST00000553237 SP7Q8TDD2 431 aaPredicted RBP17.98■□□□□ 0.47
CDK4-215ENST00000553237 C22orf23Q9BZE7 217 aa17.98■□□□□ 0.47
CDK4-215ENST00000553237 WDR64B1ANS9 1081 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 GAS7O60861 476 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 MRPS5P82675 430 aaKnown RBP17.97■□□□□ 0.47
CDK4-215ENST00000553237 LRCH2Q5VUJ6 765 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 KIAA0319LQ8IZA0 1049 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 DAGLBQ8NCG7 672 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 BBXQ8WY36 941 aaPredicted RBP17.97■□□□□ 0.47
CDK4-215ENST00000553237 SYMPKQ92797 1274 aaKnown RBP17.97■□□□□ 0.47
CDK4-215ENST00000553237 SLC5A5Q92911 643 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 IL17RAQ96F46 866 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 ASB2Q96Q27 587 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 PPP1R16BQ96T49 567 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 CDHR5Q9HBB8 845 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 DISC1Q9NRI5 854 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 GJB4Q9NTQ9 266 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 PADI3Q9ULW8 664 aa17.97■□□□□ 0.47
CDK4-215ENST00000553237 SIP14410 1827 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 COL1A2P08123 1366 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 SEC24BO95487 1268 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 TFF2Q03403 129 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 ANKRD1Q15327 319 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 TMEM266Q2M3C6 531 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 EPC2Q52LR7 807 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 GALNT17Q6IS24 598 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 RTN4RL1Q86UN2 441 aaPredicted RBP17.96■□□□□ 0.47
CDK4-215ENST00000553237 METTL13Q8N6R0 699 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 NECAB1Q8N987 351 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 LINC01599Q8WXQ3 324 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 RIT2Q99578 217 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 TEKT3Q9BXF9 490 aa17.96■□□□□ 0.47
CDK4-215ENST00000553237 UNC45AQ9H3U1 944 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms