RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 FAM153BP0C7A2 387 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 GUCY2FP51841 1108 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 FAM153CQ494X1 144 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 IRF2BP2Q7Z5L9 587 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 FRMD5Q7Z6J6 570 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 KLHL7Q8IXQ5 586 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 TAF4BQ92750 862 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 LENG9Q96B70 501 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 TMX4Q9H1E5 349 aaPredicted RBP14.28□□□□□ -0.12
CACNB3-219ENST00000551544 PI4KBQ9UBF8 816 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 FAM153AQ9UHL3 310 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 TRAF3IP3Q9Y228 551 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 GOLGA8KD6RF30 607 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 KCNK3O14649 394 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 CALUO43852 315 aaPredicted RBP14.28□□□□□ -0.12
CACNB3-219ENST00000551544 GCNT3O95395 438 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 PON1P27169 355 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 ZNF76P36508 570 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 CASP4P49662 377 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 KCNA1Q09470 495 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 TTC31Q49AM3 519 aaPredicted RBP14.28□□□□□ -0.12
CACNB3-219ENST00000551544 MOXD1Q6UVY6 613 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 SLC30A10Q6XR72 485 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 SH3BP5LQ7L8J4 393 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 CRYGNQ8WXF5 182 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 PPM1EQ8WY54 764 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 CAVIN3Q969G5 261 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 RGL1Q9NZL6 768 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 FAM198AQ9UFP1 575 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 C10orf71Q711Q0 1435 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 MSH4O15457 936 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 PPFIA1Q13136 1202 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 TRADDQ15628 312 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 ICE2Q659A1 982 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 ZDHHC15Q96MV8 337 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 CCDC43Q96MW1 224 aaKnown RBP14.28□□□□□ -0.12
CACNB3-219ENST00000551544 INPP4AQ96PE3 977 aaPredicted RBP14.28□□□□□ -0.12
CACNB3-219ENST00000551544 ZIM3Q96PE6 472 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 SH3GL2Q99962 352 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 RUSC1Q9BVN2 902 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 GDF3Q9NR23 364 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 PCDHB13Q9Y5F0 798 aa14.28□□□□□ -0.12
CACNB3-219ENST00000551544 LTBP1Q14766 1721 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 SLC26A4O43511 780 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 TBCAO75347 108 aaKnown RBP14.27□□□□□ -0.12
CACNB3-219ENST00000551544 NDUFB10O96000 172 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 NR3C1P04150 777 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 TNFRSF8P28908 595 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 IRAK1P51617 712 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 RPS6KA1Q15418 735 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 Q4G0T1 1027 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 ALS2CLQ60I27 953 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 KCTD16Q68DU8 428 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 RBM46Q8TBY0 533 aaKnown RBP14.27□□□□□ -0.12
CACNB3-219ENST00000551544 CAPS2Q9BXY5 557 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 YY1AP1Q9H869 796 aa14.27□□□□□ -0.12
CACNB3-219ENST00000551544 PDXKO00764 312 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 TRIM37O94972 964 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 NPR1P16066 1061 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 PAK2Q13177 524 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 TTMPQ5BVD1 217 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 SYDE2Q5VT97 1194 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 DPY19L2P1Q6NXN4 242 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 GJB7Q6PEY0 223 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 EPM2AIP1Q7L775 607 aaPredicted RBP14.27□□□□□ -0.13
CACNB3-219ENST00000551544 SPICE1Q8N0Z3 855 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 PIGOQ8TEQ8 1089 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 IKZF4Q9H2S9 585 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 PLCB1Q9NQ66 1216 aa14.27□□□□□ -0.13
CACNB3-219ENST00000551544 EML1O00423 815 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 TBX3O15119 743 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 SHOX2O60902 331 aaPredicted RBP14.26□□□□□ -0.13
CACNB3-219ENST00000551544 CPP00450 1065 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 KRT14P02533 472 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 EPB41P11171 864 aaKnown RBP14.26□□□□□ -0.13
CACNB3-219ENST00000551544 CHRM1P11229 460 aaPredicted RBP14.26□□□□□ -0.13
CACNB3-219ENST00000551544 SREBF1P36956 1147 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 ABCB5Q2M3G0 1257 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 SLC27A3Q5K4L6 730 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 ALKBH5Q6P6C2 394 aaKnown RBP14.26□□□□□ -0.13
CACNB3-219ENST00000551544 PACS2Q86VP3 889 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 CASKIN2Q8WXE0 1202 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 ZNF219Q9P2Y4 722 aaPredicted RBP14.26□□□□□ -0.13
CACNB3-219ENST00000551544 NAGPAQ9UK23 515 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 AJAP1Q9UKB5 411 aaPredicted RBP14.26□□□□□ -0.13
CACNB3-219ENST00000551544 ASTN1O14525 1302 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 RAD51CO43502 376 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 GNGT1P63211 74 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 CTTNQ14247 550 aaKnown RBP14.26□□□□□ -0.13
CACNB3-219ENST00000551544 CFAP58Q5T655 872 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 TMEM179Q6ZVK1 233 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 SH2D3CQ8N5H7 860 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 USP38Q8NB14 1042 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 ZNF622Q969S3 477 aaKnown RBP eCLIP14.26□□□□□ -0.13
CACNB3-219ENST00000551544 FAM20AQ96MK3 541 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 EIF2AK1Q9BQI3 630 aaKnown RBP14.26□□□□□ -0.13
CACNB3-219ENST00000551544 TYW1Q9NV66 732 aaKnown RBP14.26□□□□□ -0.13
CACNB3-219ENST00000551544 GCNT4Q9P109 453 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 RABGAP1Q9Y3P9 1069 aa14.26□□□□□ -0.13
CACNB3-219ENST00000551544 LRRC37AA6NMS7 1700 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms