RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 PCDHA2Q9Y5H9 948 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 TRPV2Q9Y5S1 764 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 C5orf42Q9H799 3197 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 DDX39AO00148 427 aaKnown RBP20.44■□□□□ 0.86
PRPF40B-215ENST00000551418 MEIS1O00470 390 aa20.44■□□□□ 0.86
PRPF40B-215ENST00000551418 CDC27P30260 824 aa20.44■□□□□ 0.86
PRPF40B-215ENST00000551418 ZP2Q05996 745 aa20.44■□□□□ 0.86
PRPF40B-215ENST00000551418 PAN2Q504Q3 1202 aaKnown RBP20.44■□□□□ 0.86
PRPF40B-215ENST00000551418 NEK1Q96PY6 1258 aa20.44■□□□□ 0.86
PRPF40B-215ENST00000551418 AZI2Q9H6S1 392 aa20.44■□□□□ 0.86
PRPF40B-215ENST00000551418 PLAGL2Q9UPG8 496 aa20.44■□□□□ 0.86
PRPF40B-215ENST00000551418 NFASCO94856 1347 aa20.44■□□□□ 0.86
PRPF40B-215ENST00000551418 SMCO2A6NFE2 343 aa20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 ATG7O95352 703 aa20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 IBSPP21815 317 aaPredicted RBP20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 ADCY7P51828 1080 aa20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 RTN1Q16799 776 aa20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 PUS10Q3MIT2 529 aaKnown RBP20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 CEP55Q53EZ4 464 aa20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 IER5Q5VY09 327 aa20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 MTHFD1LQ6UB35 978 aa20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 SYNE3Q6ZMZ3 975 aa20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 PLPPR4Q7Z2D5 763 aa20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 SDF4Q9BRK5 362 aa20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 CELF4Q9BZC1 486 aaKnown RBP20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 HCN4Q9Y3Q4 1203 aa20.43■□□□□ 0.86
PRPF40B-215ENST00000551418 TBX10O75333 385 aa20.42■□□□□ 0.86
PRPF40B-215ENST00000551418 ITGB1P05556 798 aa20.42■□□□□ 0.86
PRPF40B-215ENST00000551418 KLRC1P26715 233 aa20.42■□□□□ 0.86
PRPF40B-215ENST00000551418 IRS1P35568 1242 aa20.42■□□□□ 0.86
PRPF40B-215ENST00000551418 CLK2P49760 499 aaKnown RBP20.42■□□□□ 0.86
PRPF40B-215ENST00000551418 ADGRD2Q7Z7M1 963 aa20.42■□□□□ 0.86
PRPF40B-215ENST00000551418 SPPL3Q8TCT6 385 aa20.42■□□□□ 0.86
PRPF40B-215ENST00000551418 LMAN2LQ9H0V9 348 aa20.42■□□□□ 0.86
PRPF40B-215ENST00000551418 PCDHGC5Q9Y5F6 944 aa20.42■□□□□ 0.86
PRPF40B-215ENST00000551418 IGSF9BQ9UPX0 1349 aa20.42■□□□□ 0.86
PRPF40B-215ENST00000551418 IGKV6D-21A0A0A0MT36 114 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 C19orf67A6NJJ6 358 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 FAM86B1E9PN63 330 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 ZBTB43O43298 467 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 MGEA5O60502 916 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 MMP1P03956 469 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 FAM86B2P0C5J1 330 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 CPA1P15085 419 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 ATP4AP20648 1035 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 HOXD11P31277 338 aaPredicted RBP20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 SREBF1P36956 1147 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 JAKMIP3Q5VZ66 844 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 ABHD15Q6UXT9 468 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 DHX32Q7L7V1 743 aaKnown RBP20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 NPAS4Q8IUM7 802 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 TMEM40Q8WWA1 233 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 RBM28Q9NW13 759 aaKnown RBP20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 BARHL2Q9NY43 387 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 RWDD3Q9Y3V2 267 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 SQORQ9Y6N5 450 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 PLXNA4Q9HCM2 1894 aa20.41■□□□□ 0.86
PRPF40B-215ENST00000551418 KLF18A0A0U1RQI7 1052 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 SMIM35A0A1B0GVV1 85 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 ZBTB42B2RXF5 422 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 DHX15O43143 795 aaKnown RBP20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 MBTPS2O43462 519 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 ADD1P35611 737 aaKnown RBP20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 KRT76Q01546 638 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 PAK2Q13177 524 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 ADAM15Q13444 863 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 MUC6Q6W4X9 2439 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 CCDC60Q8IWA6 550 aaPredicted RBP20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 CMTR2Q8IYT2 770 aaKnown RBP20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 KIAA0319LQ8IZA0 1049 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 KLHL23Q8NBE8 558 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 PPP1R16BQ96T49 567 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 HCSTQ9UBK5 93 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 GINS2Q9Y248 185 aa20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 NOC2LQ9Y3T9 749 aaKnown RBP20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 ARIH1Q9Y4X5 557 aaPredicted RBP20.4■□□□□ 0.86
PRPF40B-215ENST00000551418 KDM3AQ9Y4C1 1321 aa20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 GOLGA8AA7E2F4 631 aa20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 GOLGA8BA8MQT2 603 aa20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 PRR33A8MZF0 331 aa20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 FOSP01100 380 aaPredicted RBP20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 SCG2P13521 617 aa20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 NFX1Q12986 1120 aaKnown RBP20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 PPP1R18Q6NYC8 613 aa20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 PLA2G4DQ86XP0 818 aa20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 ADHFE1Q8IWW8 467 aa20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 PLVAPQ9BX97 442 aa20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 FTHL17Q9BXU8 183 aa20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 ERVK-5Q9HDB9 667 aa20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 FNDC1Q4ZHG4 1894 aaPredicted RBP20.39■□□□□ 0.85
PRPF40B-215ENST00000551418 IGLV3-22A0A075B6J6 115 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 M0QZ92 97 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 BACH1O14867 736 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 DCXO43602 365 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 PPFIA3O75145 1194 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 ALADP13716 330 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 ZNF76P36508 570 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 SMAD2Q15796 467 aaKnown RBP20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 TSGA10IPQ3SY00 556 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 BMP2KLQ5H9B9 411 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms