RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 EPB41L4AQ9HCS5 686 aaPredicted RBP13.22□□□□□ -0.29
GPN3-208ENST00000550974 ARHGEF3Q9NR81 526 aa13.22□□□□□ -0.29
GPN3-208ENST00000550974 TNNQ9UQP3 1299 aa13.22□□□□□ -0.29
GPN3-208ENST00000550974 EXOC6BQ9Y2D4 811 aa13.22□□□□□ -0.29
GPN3-208ENST00000550974 WDR19Q8NEZ3 1342 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 APPP05067 770 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 NR3C2P08235 984 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 SP2Q02086 613 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 SMC1AQ14683 1233 aaKnown RBP13.21□□□□□ -0.29
GPN3-208ENST00000550974 NONOQ15233 471 aaKnown RBP eCLIP13.21□□□□□ -0.29
GPN3-208ENST00000550974 LPAL2Q16609 132 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 FAM102BQ5T8I3 360 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 ERC1Q8IUD2 1116 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 KDF1Q8NAX2 398 aaPredicted RBP13.21□□□□□ -0.29
GPN3-208ENST00000550974 ZBTB44Q8NCP5 570 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 DNAJB3Q8WWF6 145 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 IL17RBQ9NRM6 502 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 DZANK1Q9NVP4 752 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 ZSCAN32Q9NX65 697 aa13.21□□□□□ -0.29
GPN3-208ENST00000550974 SPEGQ15772 3267 aa13.21□□□□□ -0.3
GPN3-208ENST00000550974 CCDC171Q6TFL3 1326 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 KIAA1217Q5T5P2 1943 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 C2orf71A6NGG8 1288 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 TSPY2A6NKD2 308 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 NOP56O00567 594 aaKnown RBP13.2□□□□□ -0.3
GPN3-208ENST00000550974 GDF9O60383 454 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 LILRB5O75023 590 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 SRFP11831 508 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 MYCLP12524 364 aaPredicted RBP13.2□□□□□ -0.3
GPN3-208ENST00000550974 LAG3P18627 525 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 UBA1P22314 1058 aaKnown RBP13.2□□□□□ -0.3
GPN3-208ENST00000550974 KRT17Q04695 432 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 IL31Q6EBC2 164 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 ZSCAN25Q6NSZ9 544 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 TAF2Q6P1X5 1199 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 DCLRE1AQ6PJP8 1040 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 TRIM50Q86XT4 487 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 FAM9BQ8IZU0 186 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 SLC44A3Q8N4M1 653 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 CLUAP1Q96AJ1 413 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 USP26Q9BXU7 913 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 BCO2Q9BYV7 579 aa13.2□□□□□ -0.3
GPN3-208ENST00000550974 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
GPN3-208ENST00000550974 SRRM3A6NNA2 597 aaPredicted RBP13.19□□□□□ -0.3
GPN3-208ENST00000550974 IFIT2P09913 472 aaKnown RBP13.19□□□□□ -0.3
GPN3-208ENST00000550974 EPCAMP16422 314 aa13.19□□□□□ -0.3
GPN3-208ENST00000550974 PBX3P40426 434 aa13.19□□□□□ -0.3
GPN3-208ENST00000550974 SARSP49591 514 aaKnown RBP13.19□□□□□ -0.3
GPN3-208ENST00000550974 UTP14CQ5TAP6 766 aaKnown RBP13.19□□□□□ -0.3
GPN3-208ENST00000550974 KCNV1Q6PIU1 500 aa13.19□□□□□ -0.3
GPN3-208ENST00000550974 TSSK4Q6SA08 328 aa13.19□□□□□ -0.3
GPN3-208ENST00000550974 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
GPN3-208ENST00000550974 BCAS3Q9H6U6 928 aa13.19□□□□□ -0.3
GPN3-208ENST00000550974 CWH43Q9H720 699 aa13.19□□□□□ -0.3
GPN3-208ENST00000550974 PXMP2Q9NR77 195 aa13.19□□□□□ -0.3
GPN3-208ENST00000550974 RAB23Q9ULC3 237 aa13.19□□□□□ -0.3
GPN3-208ENST00000550974 PADI3Q9ULW8 664 aa13.19□□□□□ -0.3
GPN3-208ENST00000550974 NRCAMQ92823 1304 aa13.18□□□□□ -0.3
GPN3-208ENST00000550974 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
GPN3-208ENST00000550974 TRIM27P14373 513 aa13.18□□□□□ -0.3
GPN3-208ENST00000550974 PDE4AP27815 886 aa13.18□□□□□ -0.3
GPN3-208ENST00000550974 PAK2Q13177 524 aa13.18□□□□□ -0.3
GPN3-208ENST00000550974 PTPN14Q15678 1187 aa13.18□□□□□ -0.3
GPN3-208ENST00000550974 PRR23CQ6ZRP0 262 aa13.18□□□□□ -0.3
GPN3-208ENST00000550974 GPR149Q86SP6 731 aa13.18□□□□□ -0.3
GPN3-208ENST00000550974 CABP7Q86V35 215 aa13.18□□□□□ -0.3
GPN3-208ENST00000550974 CLASRPQ8N2M8 674 aaKnown RBP13.18□□□□□ -0.3
GPN3-208ENST00000550974 RHPN1Q8TCX5 695 aa13.18□□□□□ -0.3
GPN3-208ENST00000550974 GPKOWQ92917 476 aaPredicted RBP eCLIP13.18□□□□□ -0.3
GPN3-208ENST00000550974 ZFP91Q96JP5 570 aaPredicted RBP13.18□□□□□ -0.3
GPN3-208ENST00000550974 SEMA4GQ9NTN9 838 aa13.18□□□□□ -0.3
GPN3-208ENST00000550974 ZNF215Q9UL58 517 aaPredicted RBP13.18□□□□□ -0.3
GPN3-208ENST00000550974 TAF4O00268 1085 aa13.17□□□□□ -0.3
GPN3-208ENST00000550974 CXCL14O95715 111 aa13.17□□□□□ -0.3
GPN3-208ENST00000550974 GBP2P32456 591 aaPredicted RBP13.17□□□□□ -0.3
GPN3-208ENST00000550974 MRPS6P82932 125 aaKnown RBP13.17□□□□□ -0.3
GPN3-208ENST00000550974 LETM2Q2VYF4 491 aa13.17□□□□□ -0.3
GPN3-208ENST00000550974 KCNT2Q6UVM3 1135 aa13.17□□□□□ -0.3
GPN3-208ENST00000550974 MCF2L2Q86YR7 1114 aa13.17□□□□□ -0.3
GPN3-208ENST00000550974 TMX1Q9H3N1 280 aa13.17□□□□□ -0.3
GPN3-208ENST00000550974 N4BP1O75113 896 aaKnown RBP13.16□□□□□ -0.3
GPN3-208ENST00000550974 HSPD1P10809 573 aaKnown RBP13.16□□□□□ -0.3
GPN3-208ENST00000550974 FGFR1P11362 822 aa13.16□□□□□ -0.3
GPN3-208ENST00000550974 NCLP19338 710 aaKnown RBP13.16□□□□□ -0.3
GPN3-208ENST00000550974 TMEM62Q0P6H9 643 aa13.16□□□□□ -0.3
GPN3-208ENST00000550974 NFX1Q12986 1120 aaKnown RBP13.16□□□□□ -0.3
GPN3-208ENST00000550974 IFNL3Q8IZI9 196 aa13.16□□□□□ -0.3
GPN3-208ENST00000550974 FRAT1Q92837 279 aaPredicted RBP13.16□□□□□ -0.3
GPN3-208ENST00000550974 GLG1Q92896 1179 aa13.16□□□□□ -0.3
GPN3-208ENST00000550974 ZNF558Q96NG5 402 aa13.16□□□□□ -0.3
GPN3-208ENST00000550974 FAM49AQ9H0Q0 323 aaPredicted RBP13.16□□□□□ -0.3
GPN3-208ENST00000550974 SFXN1Q9H9B4 322 aa13.16□□□□□ -0.3
GPN3-208ENST00000550974 TUBE1Q9UJT0 475 aa13.16□□□□□ -0.3
GPN3-208ENST00000550974 ABCB11O95342 1321 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 ZFYVE26Q68DK2 2539 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 DENND4AQ7Z401 1863 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 IPO8O15397 1037 aaKnown RBP13.15□□□□□ -0.3
GPN3-208ENST00000550974 GPAA1O43292 621 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
GPN3-208ENST00000550974 TGFB3P10600 412 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms