RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PLXNA2O75051 1894 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ERICH2A1L162 156 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 CCDC69A6NI79 296 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 C6orf229H3BNL8 230 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 POU3F3P20264 500 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 DNAJB2P25686 324 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 PSMA3P25788 255 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 PRKCIP41743 596 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 BMS1Q14692 1282 aaKnown RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 LONRF3Q496Y0 759 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ARMCX2Q7L311 632 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ZNF410Q86VK4 478 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ZFPM1Q8IX07 1006 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 CTCFLQ8NI51 663 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 SYTL5Q8TDW5 730 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 EDC3Q96F86 508 aaKnown RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 TEX13BQ9BXU2 312 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ARHGAP39Q9C0H5 1083 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 A0A0G2JLW4 131 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 RGS20O76081 388 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 GARTP22102 1010 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 GCGRP47871 477 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 NEK4P51957 841 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 FAM189BP81408 668 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ICA1Q05084 483 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ZNF484Q5JVG2 852 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ACBD5Q5T8D3 534 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ZNF658Q5TYW1 1059 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 CST9Q5W186 159 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ZPBP2Q6X784 338 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 SYAP1Q96A49 352 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 PARK7Q99497 189 aaKnown RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 PDGFDQ9GZP0 370 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 PRDM10Q9NQV6 1147 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ARHGAP28Q9P2N2 729 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 PARP2Q9UGN5 583 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 CITO14578 2027 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ANKRD36A6QL64 1941 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ZBBXA8MT70 800 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 B4E1Z4 1266 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 MSCO60682 206 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 EEF1GP26641 437 aaKnown RBP5.49□□□□□ -1.53
SCAF11-212ENST00000549162 USP5P45974 858 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 RGS19P49795 217 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 USP46P62068 366 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 GRB10Q13322 594 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 TUBB2AQ13885 445 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 NUDT18Q6ZVK8 323 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 FILIP1Q7Z7B0 1213 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 TGFBRAP1Q8WUH2 860 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 RAD54LQ92698 747 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 RNF34Q969K3 372 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 TOX2Q96NM4 488 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 JPH2Q9BR39 696 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-212ENST00000549162 TUBB2BQ9BVA1 445 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 BRMS1Q9HCU9 246 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 PAK6Q9NQU5 681 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-212ENST00000549162 DISC1Q9NRI5 854 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 NSFL1CQ9UNZ2 370 aaKnown RBP5.49□□□□□ -1.53
SCAF11-212ENST00000549162 FAN1Q9Y2M0 1017 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 A0A1B0GTH6 734 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 WTIPA6NIX2 430 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-212ENST00000549162 KLRF2D3W0D1 207 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 PJA2O43164 708 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 ZNF865P0CJ78 1059 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-212ENST00000549162 TUBB4BP68371 445 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 SLC14A2Q15849 920 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 SLFN13Q68D06 897 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 SAPCD2Q86UD0 394 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 ZNF444Q8N0Y2 327 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-212ENST00000549162 ADSSL1Q8N142 457 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 TTC39CQ8N584 583 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 USP38Q8NB14 1042 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 MFSD14AQ96MC6 490 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 UBAC1Q9BSL1 405 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 SIL1Q9H173 461 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 ACAD9Q9H845 621 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 RC3H2Q9HBD1 1191 aaKnown RBP5.49□□□□□ -1.53
SCAF11-212ENST00000549162 RAI14Q9P0K7 980 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 RBPJLQ9UBG7 517 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 CCDC194A0A1B0GVG4 234 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 OR52Z1P0C646 297 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 TSPY3P0CV98 308 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 TSPY8P0CW00 308 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 VGLL4Q14135 290 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 MAPK6Q16659 721 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 QRICH1Q2TAL8 776 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 CCDC181Q5TID7 509 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 MPHOSPH6Q99547 160 aaKnown RBP5.49□□□□□ -1.53
SCAF11-212ENST00000549162 FAM129AQ9BZQ8 928 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 MCM9Q9NXL9 1143 aa5.49□□□□□ -1.53
SCAF11-212ENST00000549162 ADD3Q9UEY8 706 aaKnown RBP5.49□□□□□ -1.53
SCAF11-212ENST00000549162 MYLKQ15746 1914 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 A0A0A6YYK5 440 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 PDXKO00764 312 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 IFIT3O14879 490 aaKnown RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 TOMM70O94826 608 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 SLC34A2O95436 690 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 NPEPPSP55786 919 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 JAM2P57087 298 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms