RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SLC27A2O14975 620 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 ARP10275 920 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 NDUFV1P49821 464 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 ACTR2P61160 394 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 NHLH1Q02575 133 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 ADAM15Q13444 863 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 WWC2Q6AWC2 1192 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 RNF135Q8IUD6 432 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 NPAS4Q8IUM7 802 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 KLHL23Q8NBE8 558 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 SPPL3Q8TCT6 385 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 MSLNLQ96KJ4 702 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 CLEC1BQ9P126 229 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 HCSTQ9UBK5 93 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 CD207Q9UJ71 328 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 ZNF318Q5VUA4 2279 aa18.84■□□□□ 0.61
SSH1-208ENST00000548522 CNTNAP5Q8WYK1 1306 aa18.83■□□□□ 0.61
SSH1-208ENST00000548522 RRN3P2A6NIE6 340 aa18.83■□□□□ 0.6
SSH1-208ENST00000548522 IRX6P78412 446 aaPredicted RBP18.83■□□□□ 0.6
SSH1-208ENST00000548522 PAK2Q13177 524 aa18.83■□□□□ 0.6
SSH1-208ENST00000548522 IER5Q5VY09 327 aa18.83■□□□□ 0.6
SSH1-208ENST00000548522 P2RX5Q93086 422 aa18.83■□□□□ 0.6
SSH1-208ENST00000548522 TMEM87BQ96K49 555 aa18.83■□□□□ 0.6
SSH1-208ENST00000548522 MXRA8Q9BRK3 442 aa18.83■□□□□ 0.6
SSH1-208ENST00000548522 MTA3Q9BTC8 594 aa18.83■□□□□ 0.6
SSH1-208ENST00000548522 AZI2Q9H6S1 392 aa18.83■□□□□ 0.6
SSH1-208ENST00000548522 SLC12A7Q9Y666 1083 aa18.83■□□□□ 0.6
SSH1-208ENST00000548522 STXBP3O00186 592 aa18.82■□□□□ 0.6
SSH1-208ENST00000548522 MGEA5O60502 916 aa18.82■□□□□ 0.6
SSH1-208ENST00000548522 GLP2RO95838 553 aa18.82■□□□□ 0.6
SSH1-208ENST00000548522 SCG2P13521 617 aa18.82■□□□□ 0.6
SSH1-208ENST00000548522 LIFRP42702 1097 aa18.82■□□□□ 0.6
SSH1-208ENST00000548522 RBM10P98175 930 aaKnown RBP18.82■□□□□ 0.6
SSH1-208ENST00000548522 HERC4Q5GLZ8 1057 aaPredicted RBP18.82■□□□□ 0.6
SSH1-208ENST00000548522 RBM23Q86U06 439 aaKnown RBP18.82■□□□□ 0.6
SSH1-208ENST00000548522 FANCBQ8NB91 859 aa18.82■□□□□ 0.6
SSH1-208ENST00000548522 POF1BQ8WVV4 589 aa18.82■□□□□ 0.6
SSH1-208ENST00000548522 POP1Q99575 1024 aaKnown RBP18.82■□□□□ 0.6
SSH1-208ENST00000548522 FTHL17Q9BXU8 183 aa18.82■□□□□ 0.6
SSH1-208ENST00000548522 CELF4Q9BZC1 486 aaKnown RBP18.82■□□□□ 0.6
SSH1-208ENST00000548522 BARX2Q9UMQ3 279 aaPredicted RBP18.82■□□□□ 0.6
SSH1-208ENST00000548522 PCDHA2Q9Y5H9 948 aa18.82■□□□□ 0.6
SSH1-208ENST00000548522 KAT6AQ92794 2004 aa18.82■□□□□ 0.6
SSH1-208ENST00000548522 USP34Q70CQ2 3546 aa18.82■□□□□ 0.6
SSH1-208ENST00000548522 TECTAO75443 2155 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 CCNE2O96020 404 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 CALM1P0DP23 149 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 CALM2P0DP24 149 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 CALM3P0DP25 149 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 NRIP1P48552 1158 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 MRE11P49959 708 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 CREB3L3Q68CJ9 461 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 MTHFD1LQ6UB35 978 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 TMEM40Q8WWA1 233 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 UPF3BQ9BZI7 483 aaKnown RBP18.81■□□□□ 0.6
SSH1-208ENST00000548522 CDHR5Q9HBB8 845 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 AGO4Q9HCK5 861 aaKnown RBP18.81■□□□□ 0.6
SSH1-208ENST00000548522 TMEM260Q9NX78 707 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 GINS2Q9Y248 185 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 SQORQ9Y6N5 450 aa18.81■□□□□ 0.6
SSH1-208ENST00000548522 NFASCO94856 1347 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 M0QZ92 97 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 DDX39AO00148 427 aaKnown RBP18.8■□□□□ 0.6
SSH1-208ENST00000548522 MAFGO15525 162 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 PPFIA3O75145 1194 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 EYA4O95677 639 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 STAT5BP51692 787 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 NAPAP54920 295 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 KRT76Q01546 638 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 PLPPR4Q7Z2D5 763 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 TMTC2Q8N394 836 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 EFHBQ8N7U6 833 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 SMRP1Q8NCR6 262 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 TCEANC2Q96MN5 208 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 PPP1R16BQ96T49 567 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 SDF4Q9BRK5 362 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 ANO3Q9BYT9 981 aa18.8■□□□□ 0.6
SSH1-208ENST00000548522 SMIM35A0A1B0GVV1 85 aa18.79■□□□□ 0.6
SSH1-208ENST00000548522 FUT2Q10981 343 aa18.79■□□□□ 0.6
SSH1-208ENST00000548522 NFX1Q12986 1120 aaKnown RBP18.79■□□□□ 0.6
SSH1-208ENST00000548522 CEP55Q53EZ4 464 aa18.79■□□□□ 0.6
SSH1-208ENST00000548522 SGMS1Q86VZ5 419 aa18.79■□□□□ 0.6
SSH1-208ENST00000548522 CCDC60Q8IWA6 550 aaPredicted RBP18.79■□□□□ 0.6
SSH1-208ENST00000548522 VN1R2Q8NFZ6 395 aa18.79■□□□□ 0.6
SSH1-208ENST00000548522 ESYT1Q9BSJ8 1104 aa18.79■□□□□ 0.6
SSH1-208ENST00000548522 ERVK-5Q9HDB9 667 aa18.79■□□□□ 0.6
SSH1-208ENST00000548522 RIC8AQ9NPQ8 531 aa18.79■□□□□ 0.6
SSH1-208ENST00000548522 NOC2LQ9Y3T9 749 aaKnown RBP18.79■□□□□ 0.6
SSH1-208ENST00000548522 KDM3AQ9Y4C1 1321 aa18.78■□□□□ 0.6
SSH1-208ENST00000548522 PER2O15055 1255 aa18.78■□□□□ 0.6
SSH1-208ENST00000548522 RPLP2P05387 115 aaKnown RBP18.78■□□□□ 0.6
SSH1-208ENST00000548522 STAG3L1P0CL83 205 aa18.78■□□□□ 0.6
SSH1-208ENST00000548522 NECTIN1Q15223 517 aa18.78■□□□□ 0.6
SSH1-208ENST00000548522 NAALADL2Q58DX5 795 aa18.78■□□□□ 0.6
SSH1-208ENST00000548522 APOA5Q6Q788 366 aa18.78■□□□□ 0.6
SSH1-208ENST00000548522 BRPF3Q9ULD4 1205 aa18.78■□□□□ 0.6
SSH1-208ENST00000548522 LRFN2Q9ULH4 789 aa18.78■□□□□ 0.6
SSH1-208ENST00000548522 USP15Q9Y4E8 981 aaPredicted RBP18.78■□□□□ 0.6
SSH1-208ENST00000548522 PLXNA4Q9HCM2 1894 aa18.77■□□□□ 0.6
SSH1-208ENST00000548522 MYO15AQ9UKN7 3530 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms