RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, human

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-204	ENST00000548068	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	STXBP4	Q6ZWJ1	553 aa		13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	C1orf186	Q6ZWK4	172 aa		13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	CYFIP1	Q7L576	1253 aa		13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	TRMT44	Q8IYL2	757 aa	Known RBP	13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	MYOCD	Q8IZQ8	938 aa		13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	P2RX5	Q93086	422 aa		13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	TSG101	Q99816	390 aa		13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	RUSC1	Q9BVN2	902 aa		13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	SLC39A2	Q9NP94	309 aa		13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	FANCL	Q9NW38	375 aa		13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5B-204	ENST00000548068	SYNGAP1	Q96PV0	1343 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	IGSF9B	Q9UPX0	1349 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	BACH1	O14867	736 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	COBL	O75128	1261 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	FARP2	O94887	1054 aa	Predicted RBP	13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	ATG7	O95352	703 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	FGFR1OP	O95684	399 aa	Known RBP	13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	GGPS1	O95749	300 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	SERPINC1	P01008	464 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	PTMA	P06454	111 aa	Known RBP	13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	STX17	P56962	302 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	FANCC	Q00597	558 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	SP2	Q02086	613 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	LRRC63	Q05C16	580 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	IRF5	Q13568	498 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	PADI6	Q6TGC4	694 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	C17orf99	Q6UX52	265 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	MAMDC4	Q6UXC1	1216 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	FAM114A1	Q8IWE2	563 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	KIAA0895	Q8NCT3	520 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	TRIM47	Q96LD4	638 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	CTAGE1	Q96RT6	745 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	ZHX3	Q9H4I2	956 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	MLXIP	Q9HAP2	919 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	OLFML3	Q9NRN5	406 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	GABBR1	Q9UBS5	961 aa		13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	DDX41	Q9UJV9	622 aa	Known RBP	13.72	□□□□□ -0.21
RAB5B-204	ENST00000548068	UBE4B	O95155	1302 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	AP5Z1	O43299	807 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	CA12	O43570	354 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	ZNF18	P17022	549 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	RARRES1	P49788	294 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	SP4	Q02446	784 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	RAD51AP2	Q09MP3	1159 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	UGCG	Q16739	394 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	HS1BP3	Q53T59	392 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	XKR9	Q5GH70	373 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	XKR3	Q5GH77	459 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	CELF3	Q5SZQ8	465 aa	Known RBP	13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	CDKAL1	Q5VV42	579 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	SWSAP1	Q6NVH7	229 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	EEPD1	Q7L9B9	569 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	SFR1	Q86XK3	245 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	FBXO16	Q8IX29	292 aa	Predicted RBP	13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	DHX37	Q8IY37	1157 aa	Known RBP	13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	DRC7	Q8IY82	874 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	SLC17A8	Q8NDX2	589 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	SOCS4	Q8WXH5	440 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	SEPT1	Q8WYJ6	367 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	MAML3	Q96JK9	1138 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	FAM167A	Q96KS9	214 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	DRC1	Q96MC2	740 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	THAP9	Q9H5L6	903 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	PARVG	Q9HBI0	331 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	ZNF302	Q9NR11	478 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	MAPK8IP1	Q9UQF2	711 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	PPME1	Q9Y570	386 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	MGAM	O43451	1857 aa		13.71	□□□□□ -0.21
RAB5B-204	ENST00000548068	RBM47	A0AV96	593 aa	Known RBP	13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	NOP56	O00567	594 aa	Known RBP	13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	EIF3D	O15371	548 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	TXN	P10599	105 aa	Known RBP	13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	ZNF131	P52739	623 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	PRKCE	Q02156	737 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	MAP2K5	Q13163	448 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	ALCAM	Q13740	583 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	MORN1	Q5T089	497 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	CENPP	Q6IPU0	288 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	TTI2	Q6NXR4	508 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	CCDC62	Q6P9F0	684 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	MED15	Q96RN5	788 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	HSD3B7	Q9H2F3	369 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	AZI2	Q9H6S1	392 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	CREBZF	Q9NS37	354 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	IFNK	Q9P0W0	207 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	LARS	Q9P2J5	1176 aa	Known RBP	13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	PCDHA2	Q9Y5H9	948 aa		13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.7	□□□□□ -0.22
RAB5B-204	ENST00000548068	IGKV6D-21	A0A0A0MT36	114 aa		13.69	□□□□□ -0.22
RAB5B-204	ENST00000548068	RASSF10	A6NK89	507 aa		13.69	□□□□□ -0.22
RAB5B-204	ENST00000548068	ZBTB39	O15060	712 aa		13.69	□□□□□ -0.22
RAB5B-204	ENST00000548068	NKRF	O15226	690 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
RAB5B-204	ENST00000548068	USO1	O60763	962 aa	Known RBP	13.69	□□□□□ -0.22
RAB5B-204	ENST00000548068	GH1	P01241	217 aa		13.69	□□□□□ -0.22

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