RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 NBPF6Q5VWK0 638 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 E4F1Q66K89 784 aaPredicted RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 PMFBP1Q8TBY8 1022 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 CLEC4DQ8WXI8 215 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 OSBP2Q969R2 916 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 ARMC5Q96C12 935 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 NBPF4Q96M43 638 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 BBC3Q96PG8 261 aaPredicted RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 AARSD1Q9BTE6 412 aaKnown RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 ZNF703Q9H7S9 590 aaPredicted RBP3.61□□□□□ -1.83
CEP290-204ENST00000547926 KCND1Q9NSA2 647 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 PTGFRNQ9P2B2 879 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 PCDHA2Q9Y5H9 948 aa3.61□□□□□ -1.83
CEP290-204ENST00000547926 LTBRP36941 435 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 MAP4K2Q12851 820 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 RASGRF1Q13972 1273 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 NTRK3Q16288 839 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 SKIDA1Q1XH10 827 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 MTERF2Q49AM1 385 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 ACBD5Q5T8D3 534 aaPredicted RBP3.6□□□□□ -1.83
CEP290-204ENST00000547926 FOXB2Q5VYV0 432 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 MBNL2Q5VZF2 373 aaKnown RBP3.6□□□□□ -1.83
CEP290-204ENST00000547926 KCTD13Q8WZ19 329 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 SPATA9Q9BWV2 254 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 CCDC113Q9H0I3 377 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 SNTG2Q9NY99 539 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 SIRPGQ9P1W8 387 aa3.6□□□□□ -1.83
CEP290-204ENST00000547926 TIMM13Q9Y5L4 95 aaPredicted RBP3.6□□□□□ -1.83
CEP290-204ENST00000547926 IQCA1LA6NCM1 817 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 MSCO60682 206 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 PABPC1P11940 636 aaKnown RBP3.59□□□□□ -1.83
CEP290-204ENST00000547926 KCNAB2Q13303 367 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 SF3A1Q15459 793 aaKnown RBP3.59□□□□□ -1.83
CEP290-204ENST00000547926 TESK1Q15569 626 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 IQCEQ6IPM2 695 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 KCNT2Q6UVM3 1135 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 USP53Q70EK8 1073 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 IFNL2Q8IZJ0 200 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 LRRC47Q8N1G4 583 aaKnown RBP3.59□□□□□ -1.83
CEP290-204ENST00000547926 SREK1Q8WXA9 508 aaKnown RBP3.59□□□□□ -1.83
CEP290-204ENST00000547926 CFHR4Q92496 578 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 DEPDC7Q96QD5 511 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 PRRX2Q99811 253 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 NPFFR2Q9Y5X5 522 aa3.59□□□□□ -1.83
CEP290-204ENST00000547926 LTFP02788 710 aa3.59□□□□□ -1.84
CEP290-204ENST00000547926 FGFR1P11362 822 aa3.59□□□□□ -1.84
CEP290-204ENST00000547926 RPL11P62913 178 aaKnown RBP3.59□□□□□ -1.84
CEP290-204ENST00000547926 SSRP1Q08945 709 aaKnown RBP3.59□□□□□ -1.84
CEP290-204ENST00000547926 NSMFQ6X4W1 530 aa3.59□□□□□ -1.84
CEP290-204ENST00000547926 TMEM169Q96HH4 297 aa3.59□□□□□ -1.84
CEP290-204ENST00000547926 CHAMP1Q96JM3 812 aa3.59□□□□□ -1.84
CEP290-204ENST00000547926 CDIP1Q9H305 208 aa3.59□□□□□ -1.84
CEP290-204ENST00000547926 ADARB2Q9NS39 739 aaKnown RBP3.59□□□□□ -1.84
CEP290-204ENST00000547926 MYOTQ9UBF9 498 aa3.59□□□□□ -1.84
CEP290-204ENST00000547926 TRAV20A0A0B4J274 112 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 INO80B-WBP1J3KQ70 363 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 FAM153BP0C7A2 387 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 USP10Q14694 798 aaKnown RBP3.58□□□□□ -1.84
CEP290-204ENST00000547926 FAM209AQ5JX71 171 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.58□□□□□ -1.84
CEP290-204ENST00000547926 ZNF669Q96BR6 464 aaPredicted RBP3.58□□□□□ -1.84
CEP290-204ENST00000547926 FAM89AQ96GI7 184 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 SRPK1Q96SB4 655 aaKnown RBP3.58□□□□□ -1.84
CEP290-204ENST00000547926 DNAJC7Q99615 494 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 TACO1Q9BSH4 297 aaKnown RBP3.58□□□□□ -1.84
CEP290-204ENST00000547926 PHF20Q9BVI0 1012 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 INO80BQ9C086 356 aaPredicted RBP3.58□□□□□ -1.84
CEP290-204ENST00000547926 PPARGC1AQ9UBK2 798 aaKnown RBP3.58□□□□□ -1.84
CEP290-204ENST00000547926 ASXL2Q76L83 1435 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 MYO1BO43795 1136 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 LSAMPQ13449 338 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 GPR135Q8IZ08 494 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 ZBTB38Q8NAP3 1195 aaPredicted RBP3.58□□□□□ -1.84
CEP290-204ENST00000547926 GPR27Q9NS67 375 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 CLDND1Q9NY35 253 aa3.58□□□□□ -1.84
CEP290-204ENST00000547926 KDM2BQ8NHM5 1336 aa3.57□□□□□ -1.84
CEP290-204ENST00000547926 VASNQ6EMK4 673 aa3.57□□□□□ -1.84
CEP290-204ENST00000547926 EXOC2Q96KP1 924 aa3.57□□□□□ -1.84
CEP290-204ENST00000547926 WRNIP1Q96S55 665 aa3.57□□□□□ -1.84
CEP290-204ENST00000547926 JAM3Q9BX67 310 aa3.57□□□□□ -1.84
CEP290-204ENST00000547926 KIAA1683Q9H0B3 1180 aa3.57□□□□□ -1.84
CEP290-204ENST00000547926 C12orf65Q9H3J6 166 aaKnown RBP3.57□□□□□ -1.84
CEP290-204ENST00000547926 PRDM13Q9H4Q3 707 aa3.57□□□□□ -1.84
CEP290-204ENST00000547926 PLA2G3Q9NZ20 509 aa3.57□□□□□ -1.84
CEP290-204ENST00000547926 TRAF6Q9Y4K3 522 aa3.57□□□□□ -1.84
CEP290-204ENST00000547926 SLC27A2O14975 620 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 GTF2A2P52657 109 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 PFKPQ01813 784 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 IFRD2Q12894 506 aaPredicted RBP3.56□□□□□ -1.84
CEP290-204ENST00000547926 RRP1BQ14684 758 aaKnown RBP3.56□□□□□ -1.84
CEP290-204ENST00000547926 EMC4Q5J8M3 183 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 TMPRSS6Q8IU80 811 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 DCAF4Q8WV16 495 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 TMEM176AQ96HP8 235 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 OSBPL2Q9H1P3 480 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 RIOX1Q9H6W3 641 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 TRBV23-1A0A0A0MS06 115 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 ESYT3A0FGR9 886 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 FBXO21O94952 628 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 GCP02774 474 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms