RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 PPFIBP1Q86W92 1011 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 CREBRFQ8IUR6 639 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 SYTL5Q8TDW5 730 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 TEX13BQ9BXU2 312 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 ALPK3Q96L96 1907 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 TRIM49BA6NDI0 452 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 MSH4O15457 936 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 STX10O60499 249 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 HOXC6P09630 235 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 COPB1P53618 953 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 MCM6Q14566 821 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 PRAMEF19Q5SWL8 479 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 NSMFQ6X4W1 530 aa18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 LARP4BQ92615 738 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 MAP3K20Q9NYL2 800 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-204ENST00000547687 ATP2A1O14983 1001 aa18.38■□□□□ 0.53
CHMP1A-204ENST00000547687 CNGA1P29973 690 aa18.38■□□□□ 0.53
CHMP1A-204ENST00000547687 PMS1P54277 932 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-204ENST00000547687 SLC30A10Q6XR72 485 aa18.38■□□□□ 0.53
CHMP1A-204ENST00000547687 RNF207Q6ZRF8 634 aa18.38■□□□□ 0.53
CHMP1A-204ENST00000547687 TRPV1Q8NER1 839 aa18.38■□□□□ 0.53
CHMP1A-204ENST00000547687 RAD54LQ92698 747 aa18.38■□□□□ 0.53
CHMP1A-204ENST00000547687 VPS16Q9H269 839 aa18.38■□□□□ 0.53
CHMP1A-204ENST00000547687 TAB2Q9NYJ8 693 aa18.38■□□□□ 0.53
CHMP1A-204ENST00000547687 FARP2O94887 1054 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 PPP1R2P41236 205 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 RBL2Q08999 1139 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 STK4Q13043 487 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 TMEM119Q4V9L6 283 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 MFSD14CQ5VZR4 134 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 CNNM4Q6P4Q7 775 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 IRF2BP1Q8IU81 584 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 SAMD3Q8N6K7 520 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 FAM20AQ96MK3 541 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 TAAR1Q96RJ0 339 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 THAP9Q9H5L6 903 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 MYMKA6NI61 221 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 SPIRE1Q08AE8 756 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 KCTD2Q14681 263 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 CEP55Q53EZ4 464 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 NOC3LQ8WTT2 800 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 PANX2Q96RD6 677 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 SRRTQ9BXP5 876 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 LRRC27Q9C0I9 530 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 CRISPLD2Q9H0B8 497 aa18.37■□□□□ 0.53
CHMP1A-204ENST00000547687 ITIH6Q6UXX5 1313 aa18.36■□□□□ 0.53
CHMP1A-204ENST00000547687 PVALEFA0A1B0GWK0 134 aa18.36■□□□□ 0.53
CHMP1A-204ENST00000547687 CCNE1P24864 410 aa18.36■□□□□ 0.53
CHMP1A-204ENST00000547687 TTI2Q6NXR4 508 aa18.36■□□□□ 0.53
CHMP1A-204ENST00000547687 UBE2Q1Q7Z7E8 422 aa18.36■□□□□ 0.53
CHMP1A-204ENST00000547687 IL31RAQ8NI17 732 aa18.36■□□□□ 0.53
CHMP1A-204ENST00000547687 KIF18AQ8NI77 898 aa18.36■□□□□ 0.53
CHMP1A-204ENST00000547687 CPLX3Q8WVH0 158 aa18.36■□□□□ 0.53
CHMP1A-204ENST00000547687 P2RX5Q93086 422 aa18.36■□□□□ 0.53
CHMP1A-204ENST00000547687 MAML3Q96JK9 1138 aa18.36■□□□□ 0.53
CHMP1A-204ENST00000547687 PURBQ96QR8 312 aaKnown RBP18.36■□□□□ 0.53
CHMP1A-204ENST00000547687 BICDL2A1A5D9 508 aa18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 ZSCAN12O43309 604 aa18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 TUBB4AP04350 444 aa18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 EEF1GP26641 437 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 BAATQ14032 418 aaPredicted RBP18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 ECM1Q16610 540 aa18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 UNC13DQ70J99 1090 aa18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 PAWRQ96IZ0 340 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 MEIS1O00470 390 aa18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 EIF2AK2P19525 551 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 RBM10P98175 930 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 COBLL1Q53SF7 1204 aa18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 DYMQ7RTS9 669 aa18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 KCNK18Q7Z418 384 aa18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 ABRAQ8N0Z2 381 aa18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 DUSP9Q99956 384 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 MAGEC2Q9UBF1 373 aaPredicted RBP18.35■□□□□ 0.53
CHMP1A-204ENST00000547687 ARP10275 920 aa18.34■□□□□ 0.53
CHMP1A-204ENST00000547687 ITGB5P18084 799 aa18.34■□□□□ 0.53
CHMP1A-204ENST00000547687 LHX8Q68G74 356 aa18.34■□□□□ 0.53
CHMP1A-204ENST00000547687 ANKRD40Q6AI12 368 aa18.34■□□□□ 0.53
CHMP1A-204ENST00000547687 REXO1L1PQ8IX06 675 aa18.34■□□□□ 0.53
CHMP1A-204ENST00000547687 CSGALNACT2Q8N6G5 542 aa18.34■□□□□ 0.53
CHMP1A-204ENST00000547687 TSC1Q92574 1164 aa18.34■□□□□ 0.53
CHMP1A-204ENST00000547687 RMDN3Q96TC7 470 aa18.34■□□□□ 0.53
CHMP1A-204ENST00000547687 MXRA8Q9BRK3 442 aa18.34■□□□□ 0.53
CHMP1A-204ENST00000547687 LCTP09848 1927 aa18.34■□□□□ 0.53
CHMP1A-204ENST00000547687 IGHA2P01877 340 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 TPM1P09493 284 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 ZNF792Q3KQV3 632 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 TKFCQ3LXA3 575 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 HYIQ5T013 277 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 PCNX4Q63HM2 1172 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 NCAPH2Q6IBW4 605 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 KIAA0895Q8NCT3 520 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 HPS3Q969F9 1004 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 NT5C3AQ9H0P0 336 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 ACAD9Q9H845 621 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 SLC39A2Q9NP94 309 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 VAV3Q9UKW4 847 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 PPP2R2CQ9Y2T4 447 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 FRMPD4Q14CM0 1322 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 KDM3AQ9Y4C1 1321 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms