RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 NKRFO15226 690 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCAF11-210ENST00000547654 CNOT4O95628 575 aaKnown RBP5.78□□□□□ -1.48
SCAF11-210ENST00000547654 FHL2Q14192 279 aa5.78□□□□□ -1.48
SCAF11-210ENST00000547654 SMAD2Q15796 467 aaKnown RBP5.78□□□□□ -1.48
SCAF11-210ENST00000547654 ZNF568Q3ZCX4 644 aa5.78□□□□□ -1.48
SCAF11-210ENST00000547654 PHF19Q5T6S3 580 aa5.78□□□□□ -1.48
SCAF11-210ENST00000547654 Q6ZUG5 572 aa5.78□□□□□ -1.48
SCAF11-210ENST00000547654 GIMAP8Q8ND71 665 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-210ENST00000547654 PIP4K2CQ8TBX8 421 aa5.78□□□□□ -1.48
SCAF11-210ENST00000547654 GNRHR2Q96P88 292 aa5.78□□□□□ -1.48
SCAF11-210ENST00000547654 ADOQ96SZ5 270 aa5.78□□□□□ -1.48
SCAF11-210ENST00000547654 SEC61A2Q9H9S3 476 aa5.78□□□□□ -1.48
SCAF11-210ENST00000547654 NPIPB8E9PQR5 432 aa5.77□□□□□ -1.49
SCAF11-210ENST00000547654 ARVCFO00192 962 aa5.77□□□□□ -1.49
SCAF11-210ENST00000547654 KLHL18O94889 574 aa5.77□□□□□ -1.49
SCAF11-210ENST00000547654 NRN1LQ496H8 165 aa5.77□□□□□ -1.49
SCAF11-210ENST00000547654 GPR155Q7Z3F1 870 aa5.77□□□□□ -1.49
SCAF11-210ENST00000547654 SCUBE1Q8IWY4 988 aa5.77□□□□□ -1.49
SCAF11-210ENST00000547654 DTX3Q8N9I9 347 aa5.77□□□□□ -1.49
SCAF11-210ENST00000547654 GSTCDQ8NEC7 633 aa5.77□□□□□ -1.49
SCAF11-210ENST00000547654 TRAF6Q9Y4K3 522 aa5.77□□□□□ -1.49
SCAF11-210ENST00000547654 SLC4A7Q9Y6M7 1214 aa5.77□□□□□ -1.49
SCAF11-210ENST00000547654 ACOT7O00154 380 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 KCNQ2O43526 872 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 PARNO95453 639 aaKnown RBP5.76□□□□□ -1.49
SCAF11-210ENST00000547654 CHGBP05060 677 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 GRK2P25098 689 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 GRK3P35626 688 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 TGFB2P61812 414 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 GRIN1Q05586 938 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 ABHD18Q0P651 414 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 PLEKHG6Q3KR16 790 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 TRIM61Q5EBN2 209 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 TCTN3Q6NUS6 607 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 RNF207Q6ZRF8 634 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 RBM12BQ8IXT5 1001 aaKnown RBP5.76□□□□□ -1.49
SCAF11-210ENST00000547654 PRPF38AQ8NAV1 312 aaKnown RBP5.76□□□□□ -1.49
SCAF11-210ENST00000547654 PCDH19Q8TAB3 1148 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 CCDC136Q96JN2 1154 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 CSRNP2Q9H175 543 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 PFDN2Q9UHV9 154 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 ZFP69BQ9UJL9 534 aa5.76□□□□□ -1.49
SCAF11-210ENST00000547654 TRBV23-1A0A0A0MS06 115 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 PLEKHD1A6NEE1 506 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 SLC27A2O14975 620 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 FOXS1O43638 330 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 AMY2AP04746 511 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 KCNA6P17658 529 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 AMY2BP19961 511 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 FOXE3Q13461 319 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 KIZQ2M2Z5 673 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 IFNL3Q8IZI9 196 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 LILRB2Q8N423 598 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 IPPKQ9H8X2 491 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 DDX56Q9NY93 547 aaKnown RBP5.75□□□□□ -1.49
SCAF11-210ENST00000547654 CHPF2Q9P2E5 772 aa5.75□□□□□ -1.49
SCAF11-210ENST00000547654 ZFR2Q9UPR6 939 aaKnown RBP5.75□□□□□ -1.49
SCAF11-210ENST00000547654 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-210ENST00000547654 ESYT3A0FGR9 886 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 ZNF202O95125 648 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 KNG1P01042 644 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 LTFP02788 710 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 SOD2P04179 222 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 CKMP06732 381 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 CSF2RBP32927 897 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 GLRBP48167 497 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 SSRP1Q08945 709 aaKnown RBP5.74□□□□□ -1.49
SCAF11-210ENST00000547654 SKIDA1Q1XH10 827 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 MTERF2Q49AM1 385 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 GORABQ5T7V8 394 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 MAMDC2Q7Z304 686 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-210ENST00000547654 REXO1L1PQ8IX06 675 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 PTPRN2Q92932 1015 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 SCLYQ96I15 445 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 DNAJC7Q99615 494 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 FEZ1Q99689 392 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 DHRS4Q9BTZ2 278 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 MYH16Q9H6N6 1097 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 ARHGAP20Q9P2F6 1191 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 MRPS23Q9Y3D9 190 aaKnown RBP5.74□□□□□ -1.49
SCAF11-210ENST00000547654 NUB1Q9Y5A7 615 aa5.74□□□□□ -1.49
SCAF11-210ENST00000547654 COL6A2P12110 1019 aa5.73□□□□□ -1.49
SCAF11-210ENST00000547654 COMTP21964 271 aa5.73□□□□□ -1.49
SCAF11-210ENST00000547654 USP10Q14694 798 aaKnown RBP5.73□□□□□ -1.49
SCAF11-210ENST00000547654 MIIPQ5JXC2 388 aa5.73□□□□□ -1.49
SCAF11-210ENST00000547654 C16orf86Q6ZW13 317 aa5.73□□□□□ -1.49
SCAF11-210ENST00000547654 TAX1BP1Q86VP1 789 aa5.73□□□□□ -1.49
SCAF11-210ENST00000547654 RPUSD2Q8IZ73 545 aaKnown RBP5.73□□□□□ -1.49
SCAF11-210ENST00000547654 STPG3Q8N7X2 389 aa5.73□□□□□ -1.49
SCAF11-210ENST00000547654 AJUBAQ96IF1 538 aa5.73□□□□□ -1.49
SCAF11-210ENST00000547654 CEP89Q96ST8 783 aa5.73□□□□□ -1.49
SCAF11-210ENST00000547654 TYW1Q9NV66 732 aaKnown RBP5.73□□□□□ -1.49
SCAF11-210ENST00000547654 G3BP2Q9UN86 482 aaKnown RBP5.73□□□□□ -1.49
SCAF11-210ENST00000547654 KDM2BQ8NHM5 1336 aa5.73□□□□□ -1.49
SCAF11-210ENST00000547654 WDR33Q9C0J8 1336 aaKnown RBP5.73□□□□□ -1.49
SCAF11-210ENST00000547654 H0Y858 1186 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 FAHP16930 419 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 GYS2P54840 703 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 RAC3P60763 192 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 SUMO1P63165 101 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms