RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 VAV3Q9UKW4 847 aa14□□□□□ -0.17
SCAF11-209ENST00000547018 ZHX1Q9UKY1 873 aaPredicted RBP14□□□□□ -0.17
SCAF11-209ENST00000547018 IGLV3-22A0A075B6J6 115 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 ATP9AO75110 1047 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 XRCC5P13010 732 aaKnown RBP13.99□□□□□ -0.17
SCAF11-209ENST00000547018 VCAM1P19320 739 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 TTLL12Q14166 644 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-209ENST00000547018 TNIP1Q15025 636 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 KNOP1Q1ED39 458 aaKnown RBP13.99□□□□□ -0.17
SCAF11-209ENST00000547018 ARHGEF16Q5VV41 709 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 PROCA1Q8NCQ7 364 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-209ENST00000547018 CNKSR2Q8WXI2 1034 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 NAP1L4Q99733 375 aaKnown RBP13.99□□□□□ -0.17
SCAF11-209ENST00000547018 NUP58Q9BVL2 599 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 TELO2Q9Y4R8 837 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 CAPN6Q9Y6Q1 641 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 LRRN2O75325 713 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 NR3C1P04150 777 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 ZSCAN20P17040 1043 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-209ENST00000547018 KLHL30Q0D2K2 578 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 SYT2Q8N9I0 419 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-209ENST00000547018 TRPM4Q8TD43 1214 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 TRERF1Q96PN7 1200 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 TEKT3Q9BXF9 490 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 GGA3Q9NZ52 723 aa13.99□□□□□ -0.17
SCAF11-209ENST00000547018 ERICH4A6NGS2 130 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 EFCAB8A8MWE9 144 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 EXOC3O60645 756 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 FTCDO95954 541 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 TNNT3P45378 269 aaPredicted RBP13.98□□□□□ -0.17
SCAF11-209ENST00000547018 PRELPP51888 382 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 SFMBT2Q5VUG0 894 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 AGBL3Q8NEM8 1001 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 SECISBP2LQ93073 1101 aaKnown RBP13.98□□□□□ -0.17
SCAF11-209ENST00000547018 PACSIN1Q9BY11 444 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 SIK3Q9Y2K2 1263 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 PCDHA13Q9Y5I0 950 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 K7ENM7 598 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 ORC2Q13416 577 aaPredicted RBP13.98□□□□□ -0.17
SCAF11-209ENST00000547018 FAM102BQ5T8I3 360 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 SNRNP48Q6IEG0 339 aaKnown RBP13.98□□□□□ -0.17
SCAF11-209ENST00000547018 CCDC127Q96BQ5 260 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 CHORDC1Q9UHD1 332 aaPredicted RBP13.98□□□□□ -0.17
SCAF11-209ENST00000547018 FEM1BQ9UK73 627 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 ATRNL1Q5VV63 1379 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 PSMD2Q13200 908 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 MTMR1Q13613 665 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 LLGL1Q15334 1064 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 MMS19Q96T76 1030 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 PAGR1Q9BTK6 254 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 PARVGQ9HBI0 331 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 KCND1Q9NSA2 647 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 HYOU1Q9Y4L1 999 aa13.98□□□□□ -0.17
SCAF11-209ENST00000547018 C2orf54Q08AI8 447 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 XKR9Q5GH70 373 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 NFRKBQ6P4R8 1299 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 RNF207Q6ZRF8 634 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 ZNF771Q7L3S4 317 aaPredicted RBP13.97□□□□□ -0.17
SCAF11-209ENST00000547018 SRGAP1Q7Z6B7 1085 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 ZSWIM2Q8NEG5 633 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 ZNF668Q96K58 619 aaPredicted RBP13.97□□□□□ -0.17
SCAF11-209ENST00000547018 ERGIC2Q96RQ1 377 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 FHOD1Q9Y613 1164 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 SAR1BQ9Y6B6 198 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 CYP3A7-CYP3A51PA0A087WV96 503 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 HIP1RO75146 1068 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 CYP3A7P24462 503 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 HOXD13P35453 343 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 TNFAIP1Q13829 316 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 EXOC3L4Q17RC7 722 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 Q4G0T1 1027 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 PADI6Q6TGC4 694 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 BTNL9Q6UXG8 535 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 PNKPQ96T60 521 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 HAUS4Q9H6D7 363 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 RNF146Q9NTX7 359 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 ZNF541Q9H0D2 1346 aa13.97□□□□□ -0.17
SCAF11-209ENST00000547018 BACH1O14867 736 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 ZBTB22O15209 634 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 GFPT2O94808 682 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 KIF20AO95235 890 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 EYA4O95677 639 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 EPB41P11171 864 aaKnown RBP13.96□□□□□ -0.17
SCAF11-209ENST00000547018 ABCB4P21439 1286 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 PEX3P56589 373 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 SLC7A5Q01650 507 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 KIAA0753Q2KHM9 967 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 CCDC181Q5TID7 509 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 HS2ST1Q7LGA3 356 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 TTYH3Q9C0H2 523 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 RANBP17Q9H2T7 1088 aaKnown RBP13.96□□□□□ -0.17
SCAF11-209ENST00000547018 EHMT1Q9H9B1 1298 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 GCNT4Q9P109 453 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 SALL4Q9UJQ4 1053 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 SLC16A4O15374 487 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 ZBED4O75132 1171 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 PSMD10O75832 226 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 PPP1R2P41236 205 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 SLC9C1Q4G0N8 1177 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 MS4A14Q96JA4 679 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms