RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 SLC5A5Q92911 643 aa16.71■□□□□ 0.27
CCDC38-205ENST00000546947 NAP1L4Q99733 375 aaKnown RBP16.71■□□□□ 0.27
CCDC38-205ENST00000546947 UPF2Q9HAU5 1272 aaKnown RBP16.71■□□□□ 0.27
CCDC38-205ENST00000546947 SH2B1Q9NRF2 756 aaPredicted RBP16.71■□□□□ 0.27
CCDC38-205ENST00000546947 GJB4Q9NTQ9 266 aa16.71■□□□□ 0.27
CCDC38-205ENST00000546947 SAMM50Q9Y512 469 aa16.71■□□□□ 0.27
CCDC38-205ENST00000546947 MAFBQ9Y5Q3 323 aaPredicted RBP16.71■□□□□ 0.27
CCDC38-205ENST00000546947 COL1A2P08123 1366 aa16.71■□□□□ 0.27
CCDC38-205ENST00000546947 CDH23Q9H251 3354 aa16.71■□□□□ 0.27
CCDC38-205ENST00000546947 JAK2O60674 1132 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 GAS7O60861 476 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 CTSHP09668 335 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 GCFC2P16383 781 aaKnown RBP16.7■□□□□ 0.26
CCDC38-205ENST00000546947 SFNP31947 248 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 RABGGTBP53611 331 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 MGAT3Q09327 533 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 TRIM29Q14134 588 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 LETM2Q2VYF4 491 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 DBF4BQ8NFT6 615 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 OXER1Q8TDS5 423 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 BBXQ8WY36 941 aaPredicted RBP16.7■□□□□ 0.26
CCDC38-205ENST00000546947 CDX2Q99626 313 aaPredicted RBP16.7■□□□□ 0.26
CCDC38-205ENST00000546947 LLPHQ9BRT6 129 aaKnown RBP16.7■□□□□ 0.26
CCDC38-205ENST00000546947 SLC28A3Q9HAS3 691 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 DDX25Q9UHL0 483 aaKnown RBP16.7■□□□□ 0.26
CCDC38-205ENST00000546947 YBX2Q9Y2T7 364 aaKnown RBP16.7■□□□□ 0.26
CCDC38-205ENST00000546947 PCDHA2Q9Y5H9 948 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 EVPLQ92817 2033 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 LOXHD1Q8IVV2 1947 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 IGSF9BQ9UPX0 1349 aa16.7■□□□□ 0.26
CCDC38-205ENST00000546947 KIF28PB7ZC32 967 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 PSMD10O75832 226 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 ATP4AP20648 1035 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 JAK3P52333 1124 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 RABEP1Q15276 862 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 TCTN1Q2MV58 587 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 ZNF484Q5JVG2 852 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 PPP4R3AQ6IN85 833 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 PIK3AP1Q6ZUJ8 805 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 HERC6Q8IVU3 1022 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 CCDC83Q8IWF9 413 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 CKAP2LQ8IYA6 745 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 RDM1Q8NG50 284 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 ETNPPLQ8TBG4 499 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 DNAJB3Q8WWF6 145 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 SEPT8Q92599 483 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 APBB2Q92870 758 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 NKX2-4Q9H2Z4 354 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 DISC1Q9NRI5 854 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 GABBR1Q9UBS5 961 aa16.69■□□□□ 0.26
CCDC38-205ENST00000546947 SMIM35A0A1B0GVV1 85 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 CHRNA1P02708 482 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 MMP1P03956 469 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 GRIN2CQ14957 1233 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 IER5Q5VY09 327 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 MTHFD1LQ6UB35 978 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 NME8Q8N427 588 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 TRAPPC12Q8WVT3 735 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 TNFRSF25Q93038 417 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 FAM167AQ96KS9 214 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 UNC45AQ9H3U1 944 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 CEP131Q9UPN4 1083 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 CDY2AQ9Y6F7 541 aa16.68■□□□□ 0.26
CCDC38-205ENST00000546947 M0QZ92 97 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 SLC37A4O43826 429 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 CCNT1O60563 726 aaKnown RBP16.67■□□□□ 0.26
CCDC38-205ENST00000546947 KLRC1P26715 233 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 DEFB103AP81534 67 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 MRPS6P82932 125 aaKnown RBP16.67■□□□□ 0.26
CCDC38-205ENST00000546947 HMGN5P82970 282 aaKnown RBP16.67■□□□□ 0.26
CCDC38-205ENST00000546947 NR5A1Q13285 461 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 MKRN4PQ13434 485 aaPredicted RBP16.67■□□□□ 0.26
CCDC38-205ENST00000546947 KRT40Q6A162 431 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 B3GNT9Q6UX72 402 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 MIER3Q7Z3K6 550 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 MYLIPQ8WY64 445 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 ZBTB10Q96DT7 871 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 FAM20AQ96MK3 541 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 IFIH1Q9BYX4 1025 aaKnown RBP16.67■□□□□ 0.26
CCDC38-205ENST00000546947 SQORQ9Y6N5 450 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 EYSQ5T1H1 3165 aa16.67■□□□□ 0.26
CCDC38-205ENST00000546947 CHD9Q3L8U1 2897 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 TBX3O15119 743 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 CHMP2AO43633 222 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 TLL1O43897 1013 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 ST18O60284 1047 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 AMHP03971 560 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 MYOGP15173 224 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 EARS2Q5JPH6 523 aaKnown RBP16.66■□□□□ 0.26
CCDC38-205ENST00000546947 PPP2R2DQ66LE6 453 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 DIS3L2Q8IYB7 885 aaKnown RBP16.66■□□□□ 0.26
CCDC38-205ENST00000546947 GJA10Q969M2 543 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 OSBPL7Q9BZF2 842 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 FAM49AQ9H0Q0 323 aaPredicted RBP16.66■□□□□ 0.26
CCDC38-205ENST00000546947 KCNMB3Q9NPA1 279 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 TRPV2Q9Y5S1 764 aa16.66■□□□□ 0.26
CCDC38-205ENST00000546947 ZBTB42B2RXF5 422 aa16.65■□□□□ 0.26
CCDC38-205ENST00000546947 BTBD18B2RXH4 712 aa16.65■□□□□ 0.26
CCDC38-205ENST00000546947 GJB5O95377 273 aa16.65■□□□□ 0.26
CCDC38-205ENST00000546947 CA3P07451 260 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms