RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 FAM26EQ8N5C1 309 aa8.28□□□□□ -1.08
NPAS3-204ENST00000546849 ZNF610Q8N9Z0 462 aa8.28□□□□□ -1.08
NPAS3-204ENST00000546849 CALML6Q8TD86 181 aa8.28□□□□□ -1.08
NPAS3-204ENST00000546849 ASB15Q8WXK1 588 aa8.28□□□□□ -1.08
NPAS3-204ENST00000546849 AHCYL2Q96HN2 611 aaKnown RBP8.28□□□□□ -1.08
NPAS3-204ENST00000546849 WRNIP1Q96S55 665 aa8.28□□□□□ -1.08
NPAS3-204ENST00000546849 TMEM209Q96SK2 561 aa8.28□□□□□ -1.08
NPAS3-204ENST00000546849 SMAD5Q99717 465 aaKnown RBP8.28□□□□□ -1.08
NPAS3-204ENST00000546849 SGPP1Q9BX95 441 aa8.28□□□□□ -1.08
NPAS3-204ENST00000546849 KCNK12Q9HB15 430 aa8.28□□□□□ -1.08
NPAS3-204ENST00000546849 PLA2G2DQ9UNK4 145 aa8.28□□□□□ -1.08
NPAS3-204ENST00000546849 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
NPAS3-204ENST00000546849 PHLDB1Q86UU1 1377 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 N4BP3O15049 544 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 TGM5O43548 720 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 KDM1AO60341 852 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 FBXO21O94952 628 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 APOL3O95236 402 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 TMEM253P0C7T8 217 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 AOAHP28039 575 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 PHC1P78364 1004 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 SMAD3P84022 425 aaKnown RBP8.27□□□□□ -1.09
NPAS3-204ENST00000546849 EXOSC10Q01780 885 aaKnown RBP8.27□□□□□ -1.09
NPAS3-204ENST00000546849 TERF2Q15554 542 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 SMAD2Q15796 467 aaKnown RBP8.27□□□□□ -1.09
NPAS3-204ENST00000546849 CR1LQ2VPA4 569 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 BRDTQ58F21 947 aaPredicted RBP8.27□□□□□ -1.09
NPAS3-204ENST00000546849 TTC38Q5R3I4 469 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 GPR158Q5T848 1215 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 B3GNT8Q7Z7M8 397 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 POU5F2Q8N7G0 328 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 CNTD1Q8N815 330 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 FERMT2Q96AC1 680 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 CLIC6Q96NY7 704 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 TUBGCP5Q96RT8 1024 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 SLC38A3Q99624 504 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 SLC39A2Q9NP94 309 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 MSRAQ9UJ68 235 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 PCDHA5Q9Y5H7 936 aa8.27□□□□□ -1.09
NPAS3-204ENST00000546849 ARID1BQ8NFD5 2236 aaPredicted RBP8.27□□□□□ -1.09
NPAS3-204ENST00000546849 ST20-MTHFSA0A0A6YYL1 179 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 PRKD3O94806 890 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 EPHB3P54753 998 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 ROM1Q03395 351 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 LRRC32Q14392 662 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 PRAMEF9Q5VWM5 478 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 ESRP1Q6NXG1 681 aaKnown RBP8.26□□□□□ -1.09
NPAS3-204ENST00000546849 FRMD7Q6ZUT3 714 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 ESPNLQ6ZVH7 1005 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 RASSF3Q86WH2 238 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 PHYKPLQ8IUZ5 450 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 CLRN3Q8NCR9 226 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 RTF1Q92541 710 aaKnown RBP8.26□□□□□ -1.09
NPAS3-204ENST00000546849 DLL4Q9NR61 685 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 UCKL1Q9NWZ5 548 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 USP36Q9P275 1121 aaKnown RBP8.26□□□□□ -1.09
NPAS3-204ENST00000546849 IRAK3Q9Y616 596 aa8.26□□□□□ -1.09
NPAS3-204ENST00000546849 ZNF839A8K0R7 811 aa8.25□□□□□ -1.09
NPAS3-204ENST00000546849 DLG4P78352 724 aa8.25□□□□□ -1.09
NPAS3-204ENST00000546849 PFKPQ01813 784 aa8.25□□□□□ -1.09
NPAS3-204ENST00000546849 SYDE1Q6ZW31 735 aaPredicted RBP8.25□□□□□ -1.09
NPAS3-204ENST00000546849 IGDCC4Q8TDY8 1250 aa8.25□□□□□ -1.09
NPAS3-204ENST00000546849 ZMAT4Q9H898 229 aa8.25□□□□□ -1.09
NPAS3-204ENST00000546849 INCENPQ9NQS7 918 aa8.25□□□□□ -1.09
NPAS3-204ENST00000546849 HSPBP1Q9NZL4 362 aa8.25□□□□□ -1.09
NPAS3-204ENST00000546849 ARHGAP20Q9P2F6 1191 aa8.25□□□□□ -1.09
NPAS3-204ENST00000546849 RASSF10A6NK89 507 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 NFIBO00712 420 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 CYP7B1O75881 506 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 C8AP07357 584 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 ATF2P15336 505 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 FBLN1P23142 703 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 MC4RP32245 332 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 LIMS1P48059 325 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 GLRBP48167 497 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 JAG1P78504 1218 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 FOXO4P98177 505 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 SLC6A3Q01959 620 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 MTMR1Q13613 665 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 SKIDA1Q1XH10 827 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 ODR4Q5SWX8 454 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 SLFN12LQ6IEE8 588 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 CILP2Q8IUL8 1156 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 C16orf92Q96LL3 132 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 ZSWIM3Q96MP5 696 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 PPP1R16BQ96T49 567 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 ZDHHC5Q9C0B5 715 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 RBPJLQ9UBG7 517 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 WASHC2CQ9Y4E1 1318 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 IRS2Q9Y4H2 1338 aa8.24□□□□□ -1.09
NPAS3-204ENST00000546849 TCAF2A6NFQ2 919 aa8.23□□□□□ -1.09
NPAS3-204ENST00000546849 GOLGA8AA7E2F4 631 aa8.23□□□□□ -1.09
NPAS3-204ENST00000546849 GOLGA8BA8MQT2 603 aa8.23□□□□□ -1.09
NPAS3-204ENST00000546849 MAFGO15525 162 aa8.23□□□□□ -1.09
NPAS3-204ENST00000546849 FARP2O94887 1054 aaPredicted RBP8.23□□□□□ -1.09
NPAS3-204ENST00000546849 PLEKHG6Q3KR16 790 aa8.23□□□□□ -1.09
NPAS3-204ENST00000546849 LCE1DQ5T752 114 aa8.23□□□□□ -1.09
NPAS3-204ENST00000546849 SYDE2Q5VT97 1194 aa8.23□□□□□ -1.09
NPAS3-204ENST00000546849 DPP8Q6V1X1 898 aaPredicted RBP8.23□□□□□ -1.09
NPAS3-204ENST00000546849 LIPIQ6XZB0 460 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms