RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 CAND2O75155 1236 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 CYP2C18P33260 490 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 TECP42680 631 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 IGBP1P78318 339 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 ATP2C1P98194 919 aaPredicted RBP18.87■□□□□ 0.61
CCDC38-203ENST00000546803 MDM2Q00987 491 aaPredicted RBP18.87■□□□□ 0.61
CCDC38-203ENST00000546803 UGCGQ16739 394 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 MARCH8Q5T0T0 291 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 TMEM199Q8N511 208 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 BANK1Q8NDB2 785 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 ERMNQ8TAM6 284 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 DHX38Q92620 1227 aaKnown RBP18.87■□□□□ 0.61
CCDC38-203ENST00000546803 GDF15Q99988 308 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 RAB34Q9BZG1 259 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 ZSWIM4Q9H7M6 989 aa18.87■□□□□ 0.61
CCDC38-203ENST00000546803 PARNO95453 639 aaKnown RBP18.86■□□□□ 0.61
CCDC38-203ENST00000546803 BMP8BP34820 402 aa18.86■□□□□ 0.61
CCDC38-203ENST00000546803 PDIA5Q14554 519 aa18.86■□□□□ 0.61
CCDC38-203ENST00000546803 TRIM71Q2Q1W2 868 aaKnown RBP18.86■□□□□ 0.61
CCDC38-203ENST00000546803 ARL6IP4Q66PJ3 421 aaKnown RBP18.86■□□□□ 0.61
CCDC38-203ENST00000546803 DTHD1Q6ZMT9 781 aa18.86■□□□□ 0.61
CCDC38-203ENST00000546803 RPAINQ86UA6 219 aa18.86■□□□□ 0.61
CCDC38-203ENST00000546803 C4orf19Q8IY42 314 aa18.86■□□□□ 0.61
CCDC38-203ENST00000546803 HSD17B14Q9BPX1 270 aa18.86■□□□□ 0.61
CCDC38-203ENST00000546803 EIF2AK1Q9BQI3 630 aaKnown RBP18.86■□□□□ 0.61
CCDC38-203ENST00000546803 NIFKQ9BYG3 293 aaKnown RBP18.86■□□□□ 0.61
CCDC38-203ENST00000546803 RGL1Q9NZL6 768 aa18.86■□□□□ 0.61
CCDC38-203ENST00000546803 STK24Q9Y6E0 443 aa18.86■□□□□ 0.61
CCDC38-203ENST00000546803 MKI67P46013 3256 aaKnown RBP18.86■□□□□ 0.61
CCDC38-203ENST00000546803 ALPK3Q96L96 1907 aa18.85■□□□□ 0.61
CCDC38-203ENST00000546803 POTEMA6NI47 508 aa18.85■□□□□ 0.61
CCDC38-203ENST00000546803 SLITRK3O94933 977 aa18.85■□□□□ 0.61
CCDC38-203ENST00000546803 STBD1O95210 358 aa18.85■□□□□ 0.61
CCDC38-203ENST00000546803 ZSCAN22P10073 491 aaPredicted RBP18.85■□□□□ 0.61
CCDC38-203ENST00000546803 CKBP12277 381 aa18.85■□□□□ 0.61
CCDC38-203ENST00000546803 FPGSQ05932 587 aa18.85■□□□□ 0.61
CCDC38-203ENST00000546803 PPIGQ13427 754 aaKnown RBP eCLIP18.85■□□□□ 0.61
CCDC38-203ENST00000546803 TRMT1LQ7Z2T5 733 aaKnown RBP18.85■□□□□ 0.61
CCDC38-203ENST00000546803 RSPH3Q86UC2 560 aa18.85■□□□□ 0.61
CCDC38-203ENST00000546803 DYDC2Q96IM9 177 aa18.85■□□□□ 0.61
CCDC38-203ENST00000546803 LXNQ9BS40 222 aa18.85■□□□□ 0.61
CCDC38-203ENST00000546803 PCDHA2Q9Y5H9 948 aa18.85■□□□□ 0.61
CCDC38-203ENST00000546803 UMODL1Q5DID0 1318 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 DDX11L8A8MPP1 907 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 ZBTB42B2RXF5 422 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 MAGEB2O15479 319 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 LYPLA2O95372 231 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 IQCF3P0C7M6 154 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 SELPP16109 830 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 KLRC1P26715 233 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 RFC2P35250 354 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 THPOP40225 353 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 CCL23P55773 120 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 SF3A1Q15459 793 aaKnown RBP18.84■□□□□ 0.61
CCDC38-203ENST00000546803 MTHFD1LQ6UB35 978 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 TPH2Q8IWU9 490 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 IGSF22Q8N9C0 903 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 TRAPPC12Q8WVT3 735 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 WNT8BQ93098 351 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 POLR3CQ9BUI4 534 aaPredicted RBP18.84■□□□□ 0.61
CCDC38-203ENST00000546803 WNT8AQ9H1J5 351 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 TUFT1Q9NNX1 390 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 LRWD1Q9UFC0 647 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 PPME1Q9Y570 386 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 DOCK5Q9H7D0 1870 aa18.84■□□□□ 0.61
CCDC38-203ENST00000546803 SMIM35A0A1B0GVV1 85 aa18.83■□□□□ 0.6
CCDC38-203ENST00000546803 MUTP22033 750 aa18.83■□□□□ 0.6
CCDC38-203ENST00000546803 CYP4A11Q02928 519 aa18.83■□□□□ 0.6
CCDC38-203ENST00000546803 CTTNQ14247 550 aaKnown RBP18.83■□□□□ 0.6
CCDC38-203ENST00000546803 TARBP2Q15633 366 aaKnown RBP18.83■□□□□ 0.6
CCDC38-203ENST00000546803 HAUS3Q68CZ6 603 aa18.83■□□□□ 0.6
CCDC38-203ENST00000546803 LRRC8DQ7L1W4 858 aa18.83■□□□□ 0.6
CCDC38-203ENST00000546803 OTUD6AQ7L8S5 288 aa18.83■□□□□ 0.6
CCDC38-203ENST00000546803 RPUSD2Q8IZ73 545 aaKnown RBP18.83■□□□□ 0.6
CCDC38-203ENST00000546803 UBE2OQ9C0C9 1292 aaKnown RBP18.83■□□□□ 0.6
CCDC38-203ENST00000546803 WRAP73Q9P2S5 460 aaPredicted RBP18.83■□□□□ 0.6
CCDC38-203ENST00000546803 SEPT9Q9UHD8 586 aaPredicted RBP18.83■□□□□ 0.6
CCDC38-203ENST00000546803 C22orf31O95567 290 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 F13A1P00488 732 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 PFKMP08237 780 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 XRCC6P12956 609 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCDC38-203ENST00000546803 CSF2RAP15509 400 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 RPA1P27694 616 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 YWHABP31946 246 aaKnown RBP18.82■□□□□ 0.6
CCDC38-203ENST00000546803 ZNF618Q5T7W0 954 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 FAM173BQ6P4H8 233 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 CHRDL2Q6WN34 429 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 RUFY4Q6ZNE9 571 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 ANO5Q75V66 913 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 NME8Q8N427 588 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 ZNF396Q96N95 335 aaPredicted RBP18.82■□□□□ 0.6
CCDC38-203ENST00000546803 PRO3102Q9H379 93 aa18.82■□□□□ 0.6
CCDC38-203ENST00000546803 RSPH10B2B2RC85 870 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 RSPH10BP0C881 870 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 SPATA31C1P0DKV0 1188 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 TBC1D8BQ0IIM8 1120 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 IL17AQ16552 155 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 MTERF2Q49AM1 385 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 FAM26DQ5JW98 314 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 CATSPER3Q86XQ3 398 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms