RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 DYDC2Q96IM9 177 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 CTAGE1Q96RT6 745 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 UBE2OQ9C0C9 1292 aaKnown RBP18.89■□□□□ 0.61
LTBR-215ENST00000546296 ZSCAN16Q9H4T2 348 aaPredicted RBP18.89■□□□□ 0.61
LTBR-215ENST00000546296 TUBE1Q9UJT0 475 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 UMODL1Q5DID0 1318 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 IGSF9BQ9UPX0 1349 aa18.89■□□□□ 0.61
LTBR-215ENST00000546296 ZNF862O60290 1169 aa18.88■□□□□ 0.61
LTBR-215ENST00000546296 THPOP40225 353 aa18.88■□□□□ 0.61
LTBR-215ENST00000546296 FPGSQ05932 587 aa18.88■□□□□ 0.61
LTBR-215ENST00000546296 FOXD4L5Q5VV16 416 aaPredicted RBP18.88■□□□□ 0.61
LTBR-215ENST00000546296 DTHD1Q6ZMT9 781 aa18.88■□□□□ 0.61
LTBR-215ENST00000546296 TPH2Q8IWU9 490 aa18.88■□□□□ 0.61
LTBR-215ENST00000546296 TRAPPC12Q8WVT3 735 aa18.88■□□□□ 0.61
LTBR-215ENST00000546296 FOXD4L4Q8WXT5 416 aaPredicted RBP18.88■□□□□ 0.61
LTBR-215ENST00000546296 DHX38Q92620 1227 aaKnown RBP18.88■□□□□ 0.61
LTBR-215ENST00000546296 EIF2AK1Q9BQI3 630 aaKnown RBP18.88■□□□□ 0.61
LTBR-215ENST00000546296 RGL1Q9NZL6 768 aa18.88■□□□□ 0.61
LTBR-215ENST00000546296 CEP131Q9UPN4 1083 aa18.88■□□□□ 0.61
LTBR-215ENST00000546296 CEP290O15078 2479 aa18.88■□□□□ 0.61
LTBR-215ENST00000546296 PITPNM1O00562 1244 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 CKBP12277 381 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 KLRC1P26715 233 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 ADAM17P78536 824 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 CYP4A11Q02928 519 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 PPIGQ13427 754 aaKnown RBP eCLIP18.87■□□□□ 0.611e-12■□□□□ 11.3
LTBR-215ENST00000546296 CTTNQ14247 550 aaKnown RBP18.87■□□□□ 0.61
LTBR-215ENST00000546296 XKR3Q5GH77 459 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 MARCH8Q5T0T0 291 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 TAF2Q6P1X5 1199 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 RSPH3Q86UC2 560 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 ERMNQ8TAM6 284 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 GDF15Q99988 308 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 RAB34Q9BZG1 259 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 ZSWIM4Q9H7M6 989 aa18.87■□□□□ 0.61
LTBR-215ENST00000546296 SEPT9Q9UHD8 586 aaPredicted RBP18.87■□□□□ 0.61
LTBR-215ENST00000546296 COL1A2P08123 1366 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 MBLAC1A4D2B0 266 aaPredicted RBP18.86■□□□□ 0.61
LTBR-215ENST00000546296 POTEMA6NI47 508 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 BMP15O95972 392 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 CSF2RAP15509 400 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 SELPP16109 830 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 FXR2P51116 673 aaKnown RBP eCLIP18.86■□□□□ 0.61
LTBR-215ENST00000546296 MTHFD1LQ6UB35 978 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 RUFY4Q6ZNE9 571 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 NEK9Q8TD19 979 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 WNT8BQ93098 351 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 ZBTB10Q96DT7 871 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 SCLYQ96I15 445 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 LXNQ9BS40 222 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 FAM49AQ9H0Q0 323 aaPredicted RBP18.86■□□□□ 0.61
LTBR-215ENST00000546296 WNT8AQ9H1J5 351 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 LRWD1Q9UFC0 647 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 PCDHA2Q9Y5H9 948 aa18.86■□□□□ 0.61
LTBR-215ENST00000546296 SLITRK3O94933 977 aa18.85■□□□□ 0.61
LTBR-215ENST00000546296 IQCF3P0C7M6 154 aa18.85■□□□□ 0.61
LTBR-215ENST00000546296 ZSCAN22P10073 491 aaPredicted RBP18.85■□□□□ 0.61
LTBR-215ENST00000546296 PRPHP41219 470 aa18.85■□□□□ 0.61
LTBR-215ENST00000546296 ATP2C1P98194 919 aaPredicted RBP18.85■□□□□ 0.61
LTBR-215ENST00000546296 PDIA5Q14554 519 aa18.85■□□□□ 0.61
LTBR-215ENST00000546296 SF3A1Q15459 793 aaKnown RBP18.85■□□□□ 0.61
LTBR-215ENST00000546296 TRIM71Q2Q1W2 868 aaKnown RBP18.85■□□□□ 0.61
LTBR-215ENST00000546296 ZNF618Q5T7W0 954 aa18.85■□□□□ 0.61
LTBR-215ENST00000546296 FAM173BQ6P4H8 233 aa18.85■□□□□ 0.61
LTBR-215ENST00000546296 LRRC8DQ7L1W4 858 aa18.85■□□□□ 0.61
LTBR-215ENST00000546296 HSD17B14Q9BPX1 270 aa18.85■□□□□ 0.61
LTBR-215ENST00000546296 NIFKQ9BYG3 293 aaKnown RBP18.85■□□□□ 0.61
LTBR-215ENST00000546296 RSPH10B2B2RC85 870 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 ZBTB42B2RXF5 422 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 MAGEB2O15479 319 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 RSPH10BP0C881 870 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 BMP8BP34820 402 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 RBL2Q08999 1139 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 MTERF2Q49AM1 385 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 OTUD6AQ7L8S5 288 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 C4orf19Q8IY42 314 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 RPUSD2Q8IZ73 545 aaKnown RBP18.84■□□□□ 0.61
LTBR-215ENST00000546296 METTL13Q8N6R0 699 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 DNAJB3Q8WWF6 145 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 COLQQ9Y215 455 aaPredicted RBP18.84■□□□□ 0.61
LTBR-215ENST00000546296 STK24Q9Y6E0 443 aa18.84■□□□□ 0.61
LTBR-215ENST00000546296 TMEM150BA6NC51 233 aa18.83■□□□□ 0.6
LTBR-215ENST00000546296 CAND2O75155 1236 aa18.83■□□□□ 0.6
LTBR-215ENST00000546296 STBD1O95210 358 aa18.83■□□□□ 0.6
LTBR-215ENST00000546296 RPLP2P05387 115 aaKnown RBP18.83■□□□□ 0.6
LTBR-215ENST00000546296 CTSHP09668 335 aa18.83■□□□□ 0.6
LTBR-215ENST00000546296 RFC2P35250 354 aa18.83■□□□□ 0.6
LTBR-215ENST00000546296 CEBPZQ03701 1054 aaKnown RBP18.83■□□□□ 0.6
LTBR-215ENST00000546296 TBC1D8BQ0IIM8 1120 aa18.83■□□□□ 0.6
LTBR-215ENST00000546296 ARL6IP4Q66PJ3 421 aaKnown RBP18.83■□□□□ 0.6
LTBR-215ENST00000546296 DEFB128Q7Z7B8 93 aa18.83■□□□□ 0.6
LTBR-215ENST00000546296 ZNF396Q96N95 335 aaPredicted RBP18.83■□□□□ 0.6
LTBR-215ENST00000546296 SH2D3AQ9BRG2 576 aa18.83■□□□□ 0.6
LTBR-215ENST00000546296 FTOQ9C0B1 505 aaKnown RBP eCLIP18.83■□□□□ 0.6
LTBR-215ENST00000546296 IL23AQ9NPF7 189 aa18.83■□□□□ 0.6
LTBR-215ENST00000546296 WRAP73Q9P2S5 460 aaPredicted RBP18.83■□□□□ 0.6
LTBR-215ENST00000546296 DAXXQ9UER7 740 aaPredicted RBP18.83■□□□□ 0.6
LTBR-215ENST00000546296 CLIC4Q9Y696 253 aa18.83■□□□□ 0.6
LTBR-215ENST00000546296 SMIM35A0A1B0GVV1 85 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 VWA3AA6NCI4 1184 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms