RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 CCND1P24385 295 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 CXCR5P32302 372 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 ITGB3BPQ13352 177 aaPredicted RBP8.58□□□□□ -1.04
UBR1-202ENST00000546274 MEA1Q16626 185 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 TAX1BP1Q86VP1 789 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 CCDC155Q8N6L0 562 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 OR2W6PQ8NHA6 318 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 DTNBP1Q96EV8 351 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 RPGRIP1Q96KN7 1286 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 DUSP9Q99956 384 aaKnown RBP8.58□□□□□ -1.04
UBR1-202ENST00000546274 ZWILCHQ9H900 591 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 EHD2Q9NZN4 543 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 RCCD1A6NED2 376 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 FAM200BP0CF97 657 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 EEF1GP26641 437 aaKnown RBP8.57□□□□□ -1.04
UBR1-202ENST00000546274 VAV2P52735 878 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 BPIFB4P59827 614 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 PAK2Q13177 524 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 IQCEQ6IPM2 695 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 EMBQ6PCB8 327 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 SLC17A8Q8NDX2 589 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 RAPGEF5Q92565 580 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 UNC45AQ9H3U1 944 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 THAP9Q9H5L6 903 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 TMOD4Q9NZQ9 345 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 STIM2Q9P246 746 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 ROBO3Q96MS0 1386 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 ZSCAN5CA6NGD5 496 aaPredicted RBP8.57□□□□□ -1.04
UBR1-202ENST00000546274 TSPY2A6NKD2 308 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 USP17L8P0C7I0 530 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 CALML3P27482 149 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 KLK7P49862 253 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 INHBCP55103 352 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 PRPF4BQ13523 1007 aaKnown RBP8.57□□□□□ -1.04
UBR1-202ENST00000546274 RIPK1Q13546 671 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 SLC4A8Q2Y0W8 1093 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 PPP4R3AQ6IN85 833 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 CHADLQ6NUI6 762 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 CLEC4GQ6UXB4 293 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 ZNF662Q6ZS27 426 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 CEP128Q6ZU80 1094 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 SAPCD2Q86UD0 394 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 TXNRD3Q86VQ6 643 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 ARFGAP2Q8N6H7 521 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 DAGLBQ8NCG7 672 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 ANKS1AQ92625 1134 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 CRNKL1Q9BZJ0 848 aaKnown RBP8.57□□□□□ -1.04
UBR1-202ENST00000546274 AGPAT5Q9NUQ2 364 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 SUN2Q9UH99 717 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 PHF24Q9UPV7 400 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 SUPT3HO75486 399 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 NPTXRO95502 500 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 APBA3O96018 575 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 SRGNP10124 158 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 CARSP49589 748 aaKnown RBP8.57□□□□□ -1.04
UBR1-202ENST00000546274 GRM4Q14833 912 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 GLE1Q53GS7 698 aaKnown RBP8.57□□□□□ -1.04
UBR1-202ENST00000546274 PAPD7Q5XG87 772 aaKnown RBP8.57□□□□□ -1.04
UBR1-202ENST00000546274 SLC51AQ86UW1 340 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 TEX9Q8N6V9 391 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 CCDC197Q8NCU1 140 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 KIFAP3Q92845 792 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 PLIN2Q99541 437 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 HAUS4Q9H6D7 363 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 TFCP2L1Q9NZI6 479 aa8.57□□□□□ -1.04
UBR1-202ENST00000546274 FOCADQ5VW36 1801 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 GPR75-ASB3A0A0A6YYF3 556 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 IGF2BP3O00425 579 aaKnown RBP eCLIP8.56□□□□□ -1.04
UBR1-202ENST00000546274 GFPT2O94808 682 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 MRPS35P82673 323 aaKnown RBP8.56□□□□□ -1.04
UBR1-202ENST00000546274 CCDC38Q502W7 563 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 MIIPQ5JXC2 388 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 OLFML1Q6UWY5 402 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 DGKHQ86XP1 1220 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 IQCKQ8N0W5 287 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 PNMA1Q8ND90 353 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 SNRNP27Q8WVK2 155 aaKnown RBP8.56□□□□□ -1.04
UBR1-202ENST00000546274 ABTB1Q969K4 478 aaPredicted RBP8.56□□□□□ -1.04
UBR1-202ENST00000546274 DYNLL2Q96FJ2 89 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 MOV10L1Q9BXT6 1211 aaKnown RBP8.56□□□□□ -1.04
UBR1-202ENST00000546274 CCSER1Q9C0I3 900 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 LACRTQ9GZZ8 138 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 ZMYND8Q9ULU4 1186 aaPredicted RBP8.56□□□□□ -1.04
UBR1-202ENST00000546274 AGAP1Q9UPQ3 857 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 ASB3Q9Y575 518 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 HMGB1P1B2RPK0 211 aaPredicted RBP8.56□□□□□ -1.04
UBR1-202ENST00000546274 SP100P23497 879 aaPredicted RBP8.56□□□□□ -1.04
UBR1-202ENST00000546274 DNA2P51530 1060 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 USP46P62068 366 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 TFAP4Q01664 338 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 ZNF268Q14587 947 aaPredicted RBP8.56□□□□□ -1.04
UBR1-202ENST00000546274 SLC10A5Q5PT55 438 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 C12orf60Q5U649 245 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 DTHD1Q6ZMT9 781 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 SMIM5Q71RC9 77 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 MIGA2Q7L4E1 593 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 ANKS4BQ8N8V4 417 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 LINC00116Q8NCU8 138 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 PURBQ96QR8 312 aaKnown RBP8.56□□□□□ -1.04
UBR1-202ENST00000546274 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.56□□□□□ -1.043e-7■■■■■ 28.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms