RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ANKIB1Q9P2G1 1089 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 ARMCX3Q9UH62 379 aaPredicted RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 STXBP5LQ9Y2K9 1186 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 DIS3Q9Y2L1 958 aaKnown RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 MYH11P35749 1972 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 GAKO14976 1311 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 IGKV6D-41A0A0C4DH26 115 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 GTPBP10A4D1E9 387 aaKnown RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 SLC16A3O15427 465 aaKnown RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 MARCH6O60337 910 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 ZPR1O75312 459 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 RASSF9O75901 435 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 CYP11B2P19099 503 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 NR2F2P24468 414 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 HPDP32754 393 aaPredicted RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 JAM2P57087 298 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 IFT88Q13099 833 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 GRAPQ13588 217 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 RNF187Q5TA31 235 aaPredicted RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 ALKBH5Q6P6C2 394 aaKnown RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 PEX26Q7Z412 305 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 TMC3Q7Z5M5 1100 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 NELFCDQ8IXH7 590 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 METTL13Q8N6R0 699 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 GRAPLQ8TC17 118 aaPredicted RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 METTL14Q9HCE5 456 aaKnown RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 LRRC37AA6NMS7 1700 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 FRMPD2Q68DX3 1309 aaPredicted RBP9.55□□□□□ -0.88
TDP1-204ENST00000545686 KRIT1O00522 736 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 H2AFZP0C0S5 128 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 RHBDL3P58872 404 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 ZNF543Q08ER8 600 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 CLUL1Q15846 466 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 EXOC3L4Q17RC7 722 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 MOXD1Q6UVY6 613 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 H2AFVQ71UI9 128 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 CCDC50Q8IVM0 306 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 CENPTQ96BT3 561 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 KLC4Q9NSK0 619 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 KIAA1024Q9UPX6 916 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 ATF5Q9Y2D1 282 aaPredicted RBP9.55□□□□□ -0.88
TDP1-204ENST00000545686 STK24Q9Y6E0 443 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 NCANO14594 1321 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 PDXKO00764 312 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 CALUO43852 315 aaPredicted RBP9.55□□□□□ -0.88
TDP1-204ENST00000545686 SSBP05455 408 aaKnown RBP eCLIP9.55□□□□□ -0.88
TDP1-204ENST00000545686 XRCC5P13010 732 aaKnown RBP9.55□□□□□ -0.88
TDP1-204ENST00000545686 PON1P27169 355 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 MAP2K2P36507 400 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 SLC12A3P55017 1021 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 RNASE9P60153 205 aaKnown RBP9.55□□□□□ -0.88
TDP1-204ENST00000545686 BMT2Q1RMZ1 405 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 LACTB2Q53H82 288 aaPredicted RBP9.55□□□□□ -0.88
TDP1-204ENST00000545686 GPATCH4Q5T3I0 446 aaKnown RBP9.55□□□□□ -0.88
TDP1-204ENST00000545686 BARGINQ6ZT62 677 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 EPM2AIP1Q7L775 607 aaPredicted RBP9.55□□□□□ -0.88
TDP1-204ENST00000545686 FMNL3Q8IVF7 1028 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 SLFN12Q8IYM2 578 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 HES6Q96HZ4 224 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 MBOAT7Q96N66 472 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 RAB17Q9H0T7 212 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 JMJD4Q9H9V9 463 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 KCNMB3Q9NPA1 279 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 PPANQ9NQ55 473 aaKnown RBP9.55□□□□□ -0.88
TDP1-204ENST00000545686 TBC1D7Q9P0N9 293 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 DDX20Q9UHI6 824 aaKnown RBP9.55□□□□□ -0.88
TDP1-204ENST00000545686 LTBP1Q14766 1721 aa9.55□□□□□ -0.88
TDP1-204ENST00000545686 LY75O60449 1722 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 CYP3A7-CYP3A51PA0A087WV96 503 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 POTEB3A0JP26 581 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 POTECB2RU33 542 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 E9PMD0 336 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 PPFIA2O75334 1257 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 RPS6KA4O75676 772 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 KRT18P05783 430 aaKnown RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 IL1R1P14778 569 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 FERP16591 822 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 CYP3A7P24462 503 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 EPHA7Q15375 998 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 UBE2SQ16763 222 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 KNOP1Q1ED39 458 aaKnown RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 POTEBQ6S5H4 581 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 NT5DC3Q86UY8 548 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 CACNA2D3Q8IZS8 1091 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 MAGEC3Q8TD91 643 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 UBLCP1Q8WVY7 318 aaPredicted RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 TATDN2Q93075 761 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 DDX47Q9H0S4 455 aaKnown RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 NEUROG2Q9H2A3 272 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 DHX36Q9H2U1 1008 aaKnown RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 CENPHQ9H3R5 247 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 UTP11Q9Y3A2 253 aaKnown RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 DAAM1Q9Y4D1 1078 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 SPATA31A5Q5VU36 1347 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 SPATA31A7Q8IWB4 1347 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 RBBP6Q7Z6E9 1792 aaKnown RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 TMCO5BA8MYB1 307 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 F8VZ95 297 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 ZBTB5O15062 677 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 PPP1R11O60927 126 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms