RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 CYTH3O43739 400 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 ATP9AO75110 1047 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 STAM2O75886 525 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 FGF18O76093 207 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 STAG3L1P0CL83 205 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 UBE3AQ05086 875 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 SEC23AQ15436 765 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 TMEM266Q2M3C6 531 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 LLGL2Q6P1M3 1020 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 NKD2Q969F2 451 aaPredicted RBP10.85□□□□□ -0.67
CHD4-212ENST00000545083 CDCA3Q99618 268 aaPredicted RBP10.85□□□□□ -0.67
CHD4-212ENST00000545083 RIOX1Q9H6W3 641 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 SORCS3Q9UPU3 1222 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 TRPV2Q9Y5S1 764 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 KAT6AQ92794 2004 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 MYO10Q9HD67 2058 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 IGSF9BQ9UPX0 1349 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 TPRP12270 2363 aaKnown RBP10.84□□□□□ -0.67
CHD4-212ENST00000545083 MED19A0JLT2 244 aaPredicted RBP10.84□□□□□ -0.67
CHD4-212ENST00000545083 HIDE1A8MVS5 230 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 MGEA5O60502 916 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 ASGR2P07307 311 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 INSRRP14616 1297 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 KCNA2P16389 499 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 NT5C2P49902 561 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 PAK2Q13177 524 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 MTMR3Q13615 1198 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 SPOUT1Q5T280 376 aaKnown RBP10.84□□□□□ -0.67
CHD4-212ENST00000545083 IFIT1BQ5T764 474 aaKnown RBP10.84□□□□□ -0.67
CHD4-212ENST00000545083 FAM102BQ5T8I3 360 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 ANKRD45Q5TZF3 282 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 PLPP4Q5VZY2 271 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 UBALD2Q8IYN6 164 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 COLGALT1Q8NBJ5 622 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 TRAPPC12Q8WVT3 735 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 PCYT2Q99447 389 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 POMKQ9H5K3 350 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 TSHZ2Q9NRE2 1034 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 TYW1Q9NV66 732 aaKnown RBP10.84□□□□□ -0.67
CHD4-212ENST00000545083 TMEM260Q9NX78 707 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 ERAP1Q9NZ08 941 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 PCDHB12Q9Y5F1 795 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 SQORQ9Y6N5 450 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 CEP250Q9BV73 2442 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 LAMA4Q16363 1823 aa10.84□□□□□ -0.67
CHD4-212ENST00000545083 TBKBP1A7MCY6 615 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 SARSP49591 514 aaKnown RBP10.83□□□□□ -0.68
CHD4-212ENST00000545083 GRM4Q14833 912 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 IER5Q5VY09 327 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 PCNX4Q63HM2 1172 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 ASTLQ6HA08 431 aaPredicted RBP10.83□□□□□ -0.68
CHD4-212ENST00000545083 USP17L6PQ6QN14 398 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 CYB5R4Q7L1T6 521 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 THNSL1Q8IYQ7 743 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 RASGRP4Q8TDF6 673 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 SEPT1Q8WYJ6 367 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 GLG1Q92896 1179 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 UBAC1Q9BSL1 405 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 CWH43Q9H720 699 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 SENP2Q9HC62 589 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 PKD2L1Q9P0L9 805 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 LRFN2Q9ULH4 789 aa10.83□□□□□ -0.68
CHD4-212ENST00000545083 PNMA6FA0A0J9YX94 578 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 FSD2A1L4K1 749 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 WEE2P0C1S8 567 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 SDSP20132 328 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 CWF19L1Q69YN2 538 aaKnown RBP10.82□□□□□ -0.68
CHD4-212ENST00000545083 PDE12Q6L8Q7 609 aaKnown RBP10.82□□□□□ -0.68
CHD4-212ENST00000545083 TICAM2Q86XR7 235 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 PIBF1Q8WXW3 757 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 RMDN1Q96DB5 314 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 TCF25Q9BQ70 676 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 CELF4Q9BZC1 486 aaKnown RBP10.82□□□□□ -0.68
CHD4-212ENST00000545083 SMARCAD1Q9H4L7 1026 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 CDHR5Q9HBB8 845 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 ERVK-5Q9HDB9 667 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 AAASQ9NRG9 546 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 NR2E1Q9Y466 385 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 PCDHB7Q9Y5E2 793 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 KDM3AQ9Y4C1 1321 aa10.82□□□□□ -0.68
CHD4-212ENST00000545083 FNDC1Q4ZHG4 1894 aaPredicted RBP10.81□□□□□ -0.68
CHD4-212ENST00000545083 RRN3P2A6NIE6 340 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 C9IYK1 514 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 MEIS2O14770 477 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 PI15O43692 258 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 SRGAP2BP0DMP2 458 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 FGFR1P11362 822 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 HOXB8P17481 243 aaPredicted RBP10.81□□□□□ -0.68
CHD4-212ENST00000545083 ITGB5P18084 799 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 PBX3P40426 434 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 CLCN5P51795 746 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 MFAP1P55081 439 aaKnown RBP10.81□□□□□ -0.68
CHD4-212ENST00000545083 PLCB3Q01970 1234 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 NFX1Q12986 1120 aaKnown RBP10.81□□□□□ -0.68
CHD4-212ENST00000545083 MCTP2Q6DN12 878 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 NLRX1Q86UT6 975 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 GIMAP8Q8ND71 665 aaPredicted RBP10.81□□□□□ -0.68
CHD4-212ENST00000545083 FEZF2Q8TBJ5 459 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 TMEM40Q8WWA1 233 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 MRPS27Q92552 414 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms