RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 CCND2P30279 289 aa18.34■□□□□ 0.53
CHFR-224ENST00000545046 CYLC1P35663 651 aaPredicted RBP18.34■□□□□ 0.53
CHFR-224ENST00000545046 MAP3K9P80192 1104 aa18.34■□□□□ 0.53
CHFR-224ENST00000545046 STXBP4Q6ZWJ1 553 aa18.34■□□□□ 0.53
CHFR-224ENST00000545046 TRIM59Q8IWR1 403 aa18.34■□□□□ 0.53
CHFR-224ENST00000545046 NEK11Q8NG66 645 aa18.34■□□□□ 0.53
CHFR-224ENST00000545046 ERO1AQ96HE7 468 aa18.34■□□□□ 0.53
CHFR-224ENST00000545046 FAM207AQ9NSI2 230 aaPredicted RBP18.34■□□□□ 0.53
CHFR-224ENST00000545046 TCEAL9Q9UHQ7 104 aa18.34■□□□□ 0.53
CHFR-224ENST00000545046 ZNF214Q9UL59 606 aaPredicted RBP18.34■□□□□ 0.53
CHFR-224ENST00000545046 WDR90Q96KV7 1748 aa18.33■□□□□ 0.53
CHFR-224ENST00000545046 TESPA1A2RU30 521 aaPredicted RBP18.33■□□□□ 0.52
CHFR-224ENST00000545046 ATP2A1O14983 1001 aa18.33■□□□□ 0.52
CHFR-224ENST00000545046 TMEM132BQ14DG7 1078 aa18.33■□□□□ 0.52
CHFR-224ENST00000545046 SH3D19Q5HYK7 790 aa18.33■□□□□ 0.52
CHFR-224ENST00000545046 ZNF215Q9UL58 517 aaPredicted RBP18.33■□□□□ 0.52
CHFR-224ENST00000545046 MYPNQ86TC9 1320 aa18.33■□□□□ 0.52
CHFR-224ENST00000545046 GUCY2CP25092 1073 aa18.32■□□□□ 0.52
CHFR-224ENST00000545046 HOXD13P35453 343 aa18.32■□□□□ 0.52
CHFR-224ENST00000545046 FRMD5Q7Z6J6 570 aa18.32■□□□□ 0.52
CHFR-224ENST00000545046 SULF1Q8IWU6 871 aa18.32■□□□□ 0.52
CHFR-224ENST00000545046 CCDC170Q8IYT3 715 aa18.32■□□□□ 0.52
CHFR-224ENST00000545046 WDR24Q96S15 920 aa18.32■□□□□ 0.52
CHFR-224ENST00000545046 TEX13BQ9BXU2 312 aa18.32■□□□□ 0.52
CHFR-224ENST00000545046 EDEM3Q9BZQ6 932 aa18.32■□□□□ 0.52
CHFR-224ENST00000545046 QARSP47897 775 aaKnown RBP18.32■□□□□ 0.52
CHFR-224ENST00000545046 KRT83P78385 493 aa18.32■□□□□ 0.52
CHFR-224ENST00000545046 CDK17Q00537 523 aa18.32■□□□□ 0.52
CHFR-224ENST00000545046 PURBQ96QR8 312 aaKnown RBP18.32■□□□□ 0.52
CHFR-224ENST00000545046 MAF1Q9H063 256 aa18.32■□□□□ 0.52
CHFR-224ENST00000545046 PPP1R12BO60237 982 aaPredicted RBP18.31■□□□□ 0.52
CHFR-224ENST00000545046 NR3C2P08235 984 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 NMT1P30419 496 aaKnown RBP18.31■□□□□ 0.52
CHFR-224ENST00000545046 ZNF131P52739 623 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 PPP2R3AQ06190 1150 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 PLS1Q14651 629 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 NLRX1Q86UT6 975 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 FAM178BQ8IXR5 827 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 NSUN6Q8TEA1 469 aaKnown RBP18.31■□□□□ 0.52
CHFR-224ENST00000545046 SMCR8Q8TEV9 937 aaPredicted RBP18.31■□□□□ 0.52
CHFR-224ENST00000545046 BCAS3Q9H6U6 928 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 ACAD9Q9H845 621 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 NHEJ1Q9H9Q4 299 aaPredicted RBP18.31■□□□□ 0.52
CHFR-224ENST00000545046 ARMCX3Q9UH62 379 aaPredicted RBP18.31■□□□□ 0.52
CHFR-224ENST00000545046 DBR1Q9UK59 544 aaKnown RBP18.31■□□□□ 0.52
CHFR-224ENST00000545046 CSADQ9Y600 493 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 UBE4BO95155 1302 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 MAFGO15525 162 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 IPO7O95373 1038 aaKnown RBP18.31■□□□□ 0.52
CHFR-224ENST00000545046 SFNP31947 248 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 JAK3P52333 1124 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 KRT76Q01546 638 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 VGLL4Q14135 290 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 ODR4Q5SWX8 454 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 PADI6Q6TGC4 694 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.31■□□□□ 0.52
CHFR-224ENST00000545046 CACNA2D4Q7Z3S7 1137 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 MTERF4Q7Z6M4 381 aaKnown RBP18.31■□□□□ 0.52
CHFR-224ENST00000545046 VSIG10LQ86VR7 867 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 GPRASP2Q96D09 838 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 PLAGL2Q9UPG8 496 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 SNCAIPQ9Y6H5 919 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 KIAA1217Q5T5P2 1943 aa18.31■□□□□ 0.52
CHFR-224ENST00000545046 A0A0U1RQJ8 604 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 SPDYE16A6NNV3 312 aaPredicted RBP18.3■□□□□ 0.52
CHFR-224ENST00000545046 LYPLA2O95372 231 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 NR3C1P04150 777 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 HNRNPH3P31942 346 aaKnown RBP18.3■□□□□ 0.52
CHFR-224ENST00000545046 KCNMA1Q12791 1236 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 ZNF720Q7Z2F6 126 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 CCDC155Q8N6L0 562 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 ATRIPQ8WXE1 791 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 CCDC43Q96MW1 224 aaKnown RBP18.3■□□□□ 0.52
CHFR-224ENST00000545046 METTL14Q9HCE5 456 aaKnown RBP18.3■□□□□ 0.52
CHFR-224ENST00000545046 PCDHB13Q9Y5F0 798 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 ASTN1O14525 1302 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 FANCGO15287 622 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 SLC16A3O15427 465 aaKnown RBP18.3■□□□□ 0.52
CHFR-224ENST00000545046 ATP9AO75110 1047 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 HIP1RO75146 1068 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 EPB41P11171 864 aaKnown RBP18.3■□□□□ 0.52
CHFR-224ENST00000545046 NCBP1Q09161 790 aaKnown RBP18.3■□□□□ 0.52
CHFR-224ENST00000545046 ZNF569Q5MCW4 686 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 MAP7D2Q96T17 732 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 IRX2Q9BZI1 471 aaPredicted RBP18.3■□□□□ 0.52
CHFR-224ENST00000545046 MYO1AQ9UBC5 1043 aa18.3■□□□□ 0.52
CHFR-224ENST00000545046 PTPRFP10586 1907 aa18.29■□□□□ 0.52
CHFR-224ENST00000545046 WDR64B1ANS9 1081 aa18.29■□□□□ 0.52
CHFR-224ENST00000545046 EIF3CLB5ME19 914 aaKnown RBP18.29■□□□□ 0.52
CHFR-224ENST00000545046 EPHB6O15197 1021 aa18.29■□□□□ 0.52
CHFR-224ENST00000545046 KCNH2Q12809 1159 aa18.29■□□□□ 0.52
CHFR-224ENST00000545046 RRAGAQ7L523 313 aa18.29■□□□□ 0.52
CHFR-224ENST00000545046 ZNF710Q8N1W2 664 aa18.29■□□□□ 0.52
CHFR-224ENST00000545046 ANKRD7Q92527 254 aa18.29■□□□□ 0.52
CHFR-224ENST00000545046 CCDC42Q96M95 316 aa18.29■□□□□ 0.52
CHFR-224ENST00000545046 EIF3CQ99613 913 aaKnown RBP18.29■□□□□ 0.52
CHFR-224ENST00000545046 HAUS4Q9H6D7 363 aa18.29■□□□□ 0.52
CHFR-224ENST00000545046 CYP39A1Q9NYL5 469 aa18.29■□□□□ 0.52
CHFR-224ENST00000545046 ADM5C9JUS6 153 aa18.28■□□□□ 0.52
CHFR-224ENST00000545046 CLIC2O15247 247 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms