RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SMIM10L2BP0DMW5 78 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 HOXC8P31273 242 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 NAPAP54920 295 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 SIGLEC14Q08ET2 396 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 UBE2SQ16763 222 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 WWC2Q6AWC2 1192 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 MSLNLQ96KJ4 702 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 RPGRIP1Q96KN7 1286 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 RNPEPQ9H4A4 650 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 UBIAD1Q9Y5Z9 338 aa18.53■□□□□ 0.56
DDX55-212ENST00000544738 V9GY48 417 aaPredicted RBP18.53■□□□□ 0.56
DDX55-212ENST00000544738 CAND2O75155 1236 aa18.52■□□□□ 0.56
DDX55-212ENST00000544738 ITGB5P18084 799 aa18.52■□□□□ 0.56
DDX55-212ENST00000544738 HSPA4P34932 840 aa18.52■□□□□ 0.56
DDX55-212ENST00000544738 FUT2Q10981 343 aa18.52■□□□□ 0.56
DDX55-212ENST00000544738 MTMR1Q13613 665 aa18.52■□□□□ 0.56
DDX55-212ENST00000544738 APBB2Q92870 758 aa18.52■□□□□ 0.56
DDX55-212ENST00000544738 PPP2R3CQ969Q6 453 aa18.52■□□□□ 0.56
DDX55-212ENST00000544738 RIC8AQ9NPQ8 531 aa18.52■□□□□ 0.56
DDX55-212ENST00000544738 CLEC1BQ9P126 229 aa18.52■□□□□ 0.56
DDX55-212ENST00000544738 WDR87Q6ZQQ6 2873 aa18.52■□□□□ 0.55
DDX55-212ENST00000544738 LINC00271P0C7V0 271 aa18.51■□□□□ 0.55
DDX55-212ENST00000544738 KCNA2P16389 499 aa18.51■□□□□ 0.55
DDX55-212ENST00000544738 ADCY7P51828 1080 aa18.51■□□□□ 0.55
DDX55-212ENST00000544738 SP4Q02446 784 aa18.51■□□□□ 0.55
DDX55-212ENST00000544738 BTG3Q14201 252 aaPredicted RBP18.51■□□□□ 0.55
DDX55-212ENST00000544738 UTP14CQ5TAP6 766 aaKnown RBP18.51■□□□□ 0.55
DDX55-212ENST00000544738 BLOC1S2Q6QNY1 142 aa18.51■□□□□ 0.55
DDX55-212ENST00000544738 SEPT1Q8WYJ6 367 aa18.51■□□□□ 0.55
DDX55-212ENST00000544738 JAKMIP1Q96N16 626 aaKnown RBP18.51■□□□□ 0.55
DDX55-212ENST00000544738 JADE2Q9NQC1 790 aa18.51■□□□□ 0.55
DDX55-212ENST00000544738 BARHL2Q9NY43 387 aa18.51■□□□□ 0.55
DDX55-212ENST00000544738 NAP1L2Q9ULW6 460 aaPredicted RBP18.51■□□□□ 0.55
DDX55-212ENST00000544738 PLAGL2Q9UPG8 496 aa18.51■□□□□ 0.55
DDX55-212ENST00000544738 VPS13AQ96RL7 3174 aa18.5■□□□□ 0.55
DDX55-212ENST00000544738 ATP9AO75110 1047 aa18.5■□□□□ 0.55
DDX55-212ENST00000544738 MMP1P03956 469 aa18.5■□□□□ 0.55
DDX55-212ENST00000544738 PSMA5P28066 241 aa18.5■□□□□ 0.55
DDX55-212ENST00000544738 TCF7P36402 384 aaPredicted RBP18.5■□□□□ 0.55
DDX55-212ENST00000544738 METAP2P50579 478 aaKnown RBP eCLIP18.5■□□□□ 0.55
DDX55-212ENST00000544738 CAMK1Q14012 370 aa18.5■□□□□ 0.55
DDX55-212ENST00000544738 CBX2Q14781 532 aaPredicted RBP18.5■□□□□ 0.55
DDX55-212ENST00000544738 ASCL5Q7RTU5 278 aa18.5■□□□□ 0.55
DDX55-212ENST00000544738 RBM23Q86U06 439 aaKnown RBP18.5■□□□□ 0.55
DDX55-212ENST00000544738 FBXL16Q8N461 479 aa18.5■□□□□ 0.55
DDX55-212ENST00000544738 CLP1Q92989 425 aaKnown RBP18.5■□□□□ 0.55
DDX55-212ENST00000544738 ASIC4Q96FT7 647 aa18.5■□□□□ 0.55
DDX55-212ENST00000544738 FAM217BQ9NTX9 383 aaPredicted RBP18.5■□□□□ 0.55
DDX55-212ENST00000544738 SETD4Q9NVD3 440 aa18.5■□□□□ 0.55
DDX55-212ENST00000544738 USP15Q9Y4E8 981 aaPredicted RBP18.5■□□□□ 0.55
DDX55-212ENST00000544738 SNX14Q9Y5W7 946 aa18.5■□□□□ 0.55
DDX55-212ENST00000544738 FAM186AA6NE01 2351 aa18.5■□□□□ 0.55
DDX55-212ENST00000544738 ADGRA3Q8IWK6 1321 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 NRCAMQ92823 1304 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 SMCO2A6NFE2 343 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 EPB41L2O43491 1005 aaKnown RBP18.49■□□□□ 0.55
DDX55-212ENST00000544738 NEFLP07196 543 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 CDC27P30260 824 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 NRIP1P48552 1158 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 AP3B2Q13367 1082 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 Q6ZUG5 572 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 ADGRD2Q7Z7M1 963 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 TRIM50Q86XT4 487 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 EFHBQ8N7U6 833 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 SMRP1Q8NCR6 262 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 BRF1Q92994 677 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 MXRA8Q9BRK3 442 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 PHF7Q9BWX1 381 aaPredicted RBP18.49■□□□□ 0.55
DDX55-212ENST00000544738 BARX2Q9UMQ3 279 aaPredicted RBP18.49■□□□□ 0.55
DDX55-212ENST00000544738 TRPC6Q9Y210 931 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 NLRC5Q86WI3 1866 aa18.49■□□□□ 0.55
DDX55-212ENST00000544738 CPA1P15085 419 aa18.48■□□□□ 0.55
DDX55-212ENST00000544738 DNAJB1P25685 340 aa18.48■□□□□ 0.55
DDX55-212ENST00000544738 ADD1P35611 737 aaKnown RBP18.48■□□□□ 0.55
DDX55-212ENST00000544738 APOBRQ0VD83 1088 aa18.48■□□□□ 0.55
DDX55-212ENST00000544738 COASYQ13057 564 aa18.48■□□□□ 0.55
DDX55-212ENST00000544738 MCTP2Q6DN12 878 aa18.48■□□□□ 0.55
DDX55-212ENST00000544738 TYW1BQ6NUM6 668 aa18.48■□□□□ 0.55
DDX55-212ENST00000544738 PLVAPQ9BX97 442 aa18.48■□□□□ 0.55
DDX55-212ENST00000544738 SMARCAD1Q9H4L7 1026 aa18.48■□□□□ 0.55
DDX55-212ENST00000544738 KCNH7Q9NS40 1196 aa18.48■□□□□ 0.55
DDX55-212ENST00000544738 ERAP1Q9NZ08 941 aa18.48■□□□□ 0.55
DDX55-212ENST00000544738 DMDP11532 3685 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 GSTTP1A0A1W2PQM5 241 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 ENPP3O14638 875 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 ADAM17P78536 824 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 ARHGAP4P98171 946 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 PFKFB3Q16875 520 aaPredicted RBP18.47■□□□□ 0.55
DDX55-212ENST00000544738 ZBTB33Q86T24 672 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 SPPL3Q8TCT6 385 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 CCDC12Q8WUD4 166 aaPredicted RBP18.47■□□□□ 0.55
DDX55-212ENST00000544738 LMBR1Q8WVP7 490 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 GLG1Q92896 1179 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 TNPO1Q92973 898 aaKnown RBP18.47■□□□□ 0.55
DDX55-212ENST00000544738 ANO3Q9BYT9 981 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 PKD2L1Q9P0L9 805 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 TELO2Q9Y4R8 837 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 DOCK5Q9H7D0 1870 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 DCHS1Q96JQ0 3298 aa18.47■□□□□ 0.55
DDX55-212ENST00000544738 PROB1E7EW31 1015 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms