RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 ARHGAP20Q9P2F6 1191 aa7.42□□□□□ -1.22
LEMD3-205ENST00000544506 ZFP69BQ9UJL9 534 aa7.42□□□□□ -1.22
LEMD3-205ENST00000544506 CROTQ9UKG9 612 aa7.42□□□□□ -1.22
LEMD3-205ENST00000544506 ASB1Q9Y576 335 aa7.42□□□□□ -1.22
LEMD3-205ENST00000544506 ANKRD62A6NC57 917 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 DBX1A6NMT0 343 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 FFAR3O14843 346 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 MPIG6BO95866 241 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 POU3F3P20264 500 aaPredicted RBP7.41□□□□□ -1.22
LEMD3-205ENST00000544506 CFPP27918 469 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 GLRBP48167 497 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 OCRLQ01968 901 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 VMACQ2NL98 169 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 PRR31Q5SQ13 230 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 ESRP1Q6NXG1 681 aaKnown RBP7.41□□□□□ -1.22
LEMD3-205ENST00000544506 C1QL4Q86Z23 238 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 TMEM151BQ8IW70 566 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 LRRC56Q8IYG6 542 aaPredicted RBP7.41□□□□□ -1.22
LEMD3-205ENST00000544506 ADGRG2Q8IZP9 1017 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 ERCC4Q92889 916 aaPredicted RBP7.41□□□□□ -1.22
LEMD3-205ENST00000544506 IFT22Q9H7X7 185 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 INCENPQ9NQS7 918 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 TOMM22Q9NS69 142 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 UCKL1Q9NWZ5 548 aa7.41□□□□□ -1.22
LEMD3-205ENST00000544506 A0A1B0GTL3 188 aa7.4□□□□□ -1.22
LEMD3-205ENST00000544506 PRAMEF22A3QJZ6 481 aa7.4□□□□□ -1.22
LEMD3-205ENST00000544506 SH3D21A4FU49 640 aa7.4□□□□□ -1.22
LEMD3-205ENST00000544506 NEMP1O14524 444 aa7.4□□□□□ -1.22
LEMD3-205ENST00000544506 TGM5O43548 720 aa7.4□□□□□ -1.22
LEMD3-205ENST00000544506 CYP17A1P05093 508 aa7.4□□□□□ -1.22
LEMD3-205ENST00000544506 ID4P47928 161 aa7.4□□□□□ -1.22
LEMD3-205ENST00000544506 TCERG1LQ5VWI1 586 aa7.4□□□□□ -1.22
LEMD3-205ENST00000544506 PRAMEF18Q5VWM3 479 aa7.4□□□□□ -1.22
LEMD3-205ENST00000544506 RTN4RL1Q86UN2 441 aaPredicted RBP7.4□□□□□ -1.22
LEMD3-205ENST00000544506 FOXRED1Q96CU9 486 aaPredicted RBP7.4□□□□□ -1.22
LEMD3-205ENST00000544506 TTC1Q99614 292 aa7.4□□□□□ -1.22
LEMD3-205ENST00000544506 EMC7Q9NPA0 242 aa7.4□□□□□ -1.22
LEMD3-205ENST00000544506 GOLGA6L22H0YM25 854 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 IL18BPO95998 194 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 RPL13P26373 211 aaKnown RBP7.39□□□□□ -1.23
LEMD3-205ENST00000544506 NFKB2Q00653 900 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 TTLL7Q6ZT98 887 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 C11orf74Q86VG3 221 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 PASD1Q8IV76 773 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 STPG3Q8N7X2 389 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 TP53I13Q8NBR0 393 aaPredicted RBP7.39□□□□□ -1.23
LEMD3-205ENST00000544506 C16orf92Q96LL3 132 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 TACO1Q9BSH4 297 aaKnown RBP7.39□□□□□ -1.23
LEMD3-205ENST00000544506 AMNQ9BXJ7 453 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 ZMAT4Q9H898 229 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 KCND1Q9NSA2 647 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 GALNT8Q9NY28 637 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 NTMQ9P121 344 aa7.39□□□□□ -1.23
LEMD3-205ENST00000544506 APOBEC2Q9Y235 224 aaKnown RBP7.39□□□□□ -1.23
LEMD3-205ENST00000544506 FBXO21O94952 628 aa7.38□□□□□ -1.23
LEMD3-205ENST00000544506 EYA4O95677 639 aa7.38□□□□□ -1.23
LEMD3-205ENST00000544506 ZNF28P17035 718 aa7.38□□□□□ -1.23
LEMD3-205ENST00000544506 MLLT6P55198 1093 aaPredicted RBP7.38□□□□□ -1.23
LEMD3-205ENST00000544506 EPHA7Q15375 998 aa7.38□□□□□ -1.23
LEMD3-205ENST00000544506 LRSAM1Q6UWE0 723 aa7.38□□□□□ -1.23
LEMD3-205ENST00000544506 LINC01356Q8N9X3 169 aa7.38□□□□□ -1.23
LEMD3-205ENST00000544506 ZCCHC14Q8WYQ9 949 aaKnown RBP7.38□□□□□ -1.23
LEMD3-205ENST00000544506 ZEB2O60315 1214 aa7.37□□□□□ -1.23
LEMD3-205ENST00000544506 BRINP1O60477 761 aa7.37□□□□□ -1.23
LEMD3-205ENST00000544506 CYP7B1O75881 506 aa7.37□□□□□ -1.23
LEMD3-205ENST00000544506 COL6A1P12109 1028 aa7.37□□□□□ -1.23
LEMD3-205ENST00000544506 SMAD3P84022 425 aaKnown RBP7.37□□□□□ -1.23
LEMD3-205ENST00000544506 AMPD3Q01432 767 aa7.37□□□□□ -1.23
LEMD3-205ENST00000544506 ALDH6A1Q02252 535 aaKnown RBP7.37□□□□□ -1.23
LEMD3-205ENST00000544506 SMAD2Q15796 467 aaKnown RBP7.37□□□□□ -1.23
LEMD3-205ENST00000544506 ATP13A4Q4VNC1 1196 aa7.37□□□□□ -1.23
LEMD3-205ENST00000544506 TRMT10BQ6PF06 316 aaKnown RBP7.37□□□□□ -1.23
LEMD3-205ENST00000544506 CARFQ8N187 725 aa7.37□□□□□ -1.23
LEMD3-205ENST00000544506 ZSCAN18Q8TBC5 510 aaPredicted RBP7.37□□□□□ -1.23
LEMD3-205ENST00000544506 UBA6A0AVT1 1052 aaPredicted RBP7.36□□□□□ -1.23
LEMD3-205ENST00000544506 DDX3XO00571 662 aaKnown RBP eCLIP7.36□□□□□ -1.23
LEMD3-205ENST00000544506 PRLP01236 227 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 CPEP16870 476 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 ECE1P42892 770 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 SARSP49591 514 aaKnown RBP7.36□□□□□ -1.23
LEMD3-205ENST00000544506 IL13RA1P78552 427 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 STAT4Q14765 748 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 LHFPL2Q6ZUX7 228 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 ZZZ3Q8IYH5 903 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 RTF1Q92541 710 aaKnown RBP7.36□□□□□ -1.23
LEMD3-205ENST00000544506 SCYL1Q96KG9 808 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 FOXB1Q99853 325 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 MS4A5Q9H3V2 200 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 GOLGA2P5Q9HBQ8 144 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 COL4A3BPQ9Y5P4 624 aa7.36□□□□□ -1.23
LEMD3-205ENST00000544506 KNG1P01042 644 aa7.35□□□□□ -1.23
LEMD3-205ENST00000544506 CD40P25942 277 aa7.35□□□□□ -1.23
LEMD3-205ENST00000544506 IL13P35225 146 aa7.35□□□□□ -1.23
LEMD3-205ENST00000544506 PHC1P78364 1004 aa7.35□□□□□ -1.23
LEMD3-205ENST00000544506 TERF2Q15554 542 aa7.35□□□□□ -1.23
LEMD3-205ENST00000544506 DDB1Q16531 1140 aa7.35□□□□□ -1.23
LEMD3-205ENST00000544506 GPR158Q5T848 1215 aa7.35□□□□□ -1.23
LEMD3-205ENST00000544506 DDX42Q86XP3 938 aaKnown RBP eCLIP7.35□□□□□ -1.23
LEMD3-205ENST00000544506 NME9Q86XW9 330 aa7.35□□□□□ -1.23
LEMD3-205ENST00000544506 ATL2Q8NHH9 583 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms