RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 AP5Z1O43299 807 aa33.82■■■■□ 3.01
CCM2-219ENST00000544363 SNAI1O95863 264 aaPredicted RBP33.82■■■■□ 3.01
CCM2-219ENST00000544363 PPP1R2P41236 205 aa33.82■■■■□ 3.01
CCM2-219ENST00000544363 CELF3Q5SZQ8 465 aaKnown RBP33.82■■■■□ 3.01
CCM2-219ENST00000544363 TAPT1Q6NXT6 567 aa33.82■■■■□ 3.01
CCM2-219ENST00000544363 TRMT44Q8IYL2 757 aaKnown RBP33.82■■■■□ 3.01
CCM2-219ENST00000544363 KIAA0895Q8NCT3 520 aa33.82■■■■□ 3.01
CCM2-219ENST00000544363 SLC39A2Q9NP94 309 aa33.82■■■■□ 3.01
CCM2-219ENST00000544363 ANKEF1Q9NU02 776 aa33.82■■■■□ 3.01
CCM2-219ENST00000544363 CTNND2Q9UQB3 1225 aa33.82■■■■□ 3.01
CCM2-219ENST00000544363 MAPK8IP1Q9UQF2 711 aa33.82■■■■□ 3.01
CCM2-219ENST00000544363 TXNP10599 105 aaKnown RBP33.82■■■■□ 3
CCM2-219ENST00000544363 PAK1Q13153 545 aa33.82■■■■□ 3
CCM2-219ENST00000544363 KATNBL1Q9H079 304 aa33.82■■■■□ 3
CCM2-219ENST00000544363 RWDD2AQ9UIY3 292 aa33.82■■■■□ 3
CCM2-219ENST00000544363 SYNRGQ9UMZ2 1314 aa33.81■■■■□ 3
CCM2-219ENST00000544363 RBM47A0AV96 593 aaKnown RBP33.81■■■■□ 3
CCM2-219ENST00000544363 HOXC6P09630 235 aa33.81■■■■□ 3
CCM2-219ENST00000544363 RARRES1P49788 294 aa33.81■■■■□ 3
CCM2-219ENST00000544363 USP6NLQ92738 828 aa33.81■■■■□ 3
CCM2-219ENST00000544363 DOCK3Q8IZD9 2030 aa33.81■■■■□ 3
CCM2-219ENST00000544363 IGSF9BQ9UPX0 1349 aa33.8■■■■□ 3
CCM2-219ENST00000544363 GSTTP1A0A1W2PQM5 241 aa33.8■■■■□ 3
CCM2-219ENST00000544363 BACH1O14867 736 aa33.8■■■■□ 3
CCM2-219ENST00000544363 ZNF862O60290 1169 aa33.8■■■■□ 3
CCM2-219ENST00000544363 STX17P56962 302 aa33.8■■■■□ 3
CCM2-219ENST00000544363 HERC4Q5GLZ8 1057 aaPredicted RBP33.8■■■■□ 3
CCM2-219ENST00000544363 FAM26FQ5R3K3 315 aa33.8■■■■□ 3
CCM2-219ENST00000544363 NELFBQ8WX92 580 aa33.8■■■■□ 3
CCM2-219ENST00000544363 HSD3B7Q9H2F3 369 aa33.8■■■■□ 3
CCM2-219ENST00000544363 IGKV6D-21A0A0A0MT36 114 aa33.79■■■■□ 3
CCM2-219ENST00000544363 PADI6Q6TGC4 694 aa33.79■■■■□ 3
CCM2-219ENST00000544363 DHX37Q8IY37 1157 aaKnown RBP33.79■■■■□ 3
CCM2-219ENST00000544363 SEPT1Q8WYJ6 367 aa33.79■■■■□ 3
CCM2-219ENST00000544363 DHTKD1Q96HY7 919 aaPredicted RBP33.79■■■■□ 3
CCM2-219ENST00000544363 ZNF302Q9NR11 478 aa33.79■■■■□ 3
CCM2-219ENST00000544363 NFE2L3Q9Y4A8 694 aa33.79■■■■□ 3
CCM2-219ENST00000544363 TNPO2O14787 897 aaKnown RBP33.79■■■■□ 3
CCM2-219ENST00000544363 PSMA7O14818 248 aa33.79■■■■□ 3
CCM2-219ENST00000544363 GUCY2CP25092 1073 aa33.79■■■■□ 3
CCM2-219ENST00000544363 SPATA1Q5VX52 437 aa33.79■■■■□ 3
CCM2-219ENST00000544363 OTUD6AQ7L8S5 288 aa33.79■■■■□ 3
CCM2-219ENST00000544363 SOCS4Q8WXH5 440 aa33.79■■■■□ 3
CCM2-219ENST00000544363 CCDC43Q96MW1 224 aaKnown RBP33.79■■■■□ 3
CCM2-219ENST00000544363 ZHX3Q9H4I2 956 aa33.79■■■■□ 3
CCM2-219ENST00000544363 FANCLQ9NW38 375 aa33.79■■■■□ 3
CCM2-219ENST00000544363 PCDHA2Q9Y5H9 948 aa33.79■■■■□ 3
CCM2-219ENST00000544363 MAFBQ9Y5Q3 323 aaPredicted RBP33.79■■■■□ 3
CCM2-219ENST00000544363 TBCAO75347 108 aaKnown RBP33.78■■■■□ 3
CCM2-219ENST00000544363 STBD1O95210 358 aa33.78■■■■□ 3
CCM2-219ENST00000544363 ADCY5O95622 1261 aa33.78■■■■□ 3
CCM2-219ENST00000544363 SARM1Q6SZW1 724 aa33.78■■■■□ 3
CCM2-219ENST00000544363 ANO5Q75V66 913 aa33.78■■■■□ 3
CCM2-219ENST00000544363 ABHD16BQ9H3Z7 469 aa33.78■■■■□ 3
CCM2-219ENST00000544363 GJD2Q9UKL4 321 aa33.78■■■■□ 3
CCM2-219ENST00000544363 COL4A3BPQ9Y5P4 624 aa33.78■■■■□ 3
CCM2-219ENST00000544363 CCDC173Q0VFZ6 552 aa33.77■■■■□ 3
CCM2-219ENST00000544363 UTP14CQ5TAP6 766 aaKnown RBP33.77■■■■□ 3
CCM2-219ENST00000544363 COPS5Q92905 334 aa33.77■■■■□ 3
CCM2-219ENST00000544363 ODF2LQ9ULJ1 636 aa33.77■■■■□ 3
CCM2-219ENST00000544363 RSPH10B2B2RC85 870 aa33.76■■■■□ 3
CCM2-219ENST00000544363 RSPH10BP0C881 870 aa33.76■■■■□ 3
CCM2-219ENST00000544363 GAP43P17677 238 aa33.76■■■■□ 3
CCM2-219ENST00000544363 RGS2P41220 211 aa33.76■■■■□ 3
CCM2-219ENST00000544363 PRKCEQ02156 737 aa33.76■■■■□ 3
CCM2-219ENST00000544363 XKR9Q5GH70 373 aa33.76■■■■□ 3
CCM2-219ENST00000544363 GPR20Q99678 358 aa33.76■■■■□ 3
CCM2-219ENST00000544363 TMEM150BA6NC51 233 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 TMEM63BQ5T3F8 832 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 TRMT1LQ7Z2T5 733 aaKnown RBP33.75■■■□□ 2.99
CCM2-219ENST00000544363 GUF1Q8N442 669 aaKnown RBP33.75■■■□□ 2.99
CCM2-219ENST00000544363 PDLIM2Q96JY6 352 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 SPATA33Q96N06 139 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 FAM13AO94988 1023 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 CTGFP29279 349 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 TCF7P36402 384 aaPredicted RBP33.75■■■□□ 2.99
CCM2-219ENST00000544363 ACVR2BQ13705 512 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 HSDL1Q3SXM5 330 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 XKR3Q5GH77 459 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 FAM160B1Q5W0V3 765 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 PLA2G4FQ68DD2 849 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 SFR1Q86XK3 245 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 PPP1R9BQ96SB3 815 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 PCYT2Q99447 389 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 TBC1D7Q9P0N9 293 aa33.75■■■□□ 2.99
CCM2-219ENST00000544363 MYH9P35579 1960 aaKnown RBP33.74■■■□□ 2.99
CCM2-219ENST00000544363 NOP56O00567 594 aaKnown RBP33.74■■■□□ 2.99
CCM2-219ENST00000544363 NPEPPSP55786 919 aa33.74■■■□□ 2.99
CCM2-219ENST00000544363 AFAP1L1Q8TED9 768 aa33.74■■■□□ 2.99
CCM2-219ENST00000544363 TRIM5Q9C035 493 aa33.74■■■□□ 2.99
CCM2-219ENST00000544363 POLD4Q9HCU8 107 aa33.74■■■□□ 2.99
CCM2-219ENST00000544363 CCNE1P24864 410 aa33.73■■■□□ 2.99
CCM2-219ENST00000544363 ADCYAP1R1P41586 468 aa33.73■■■□□ 2.99
CCM2-219ENST00000544363 ZNF131P52739 623 aa33.73■■■□□ 2.99
CCM2-219ENST00000544363 FCGRTP55899 365 aa33.73■■■□□ 2.99
CCM2-219ENST00000544363 GLIS3Q8NEA6 775 aa33.73■■■□□ 2.99
CCM2-219ENST00000544363 P2RX5Q93086 422 aa33.73■■■□□ 2.99
CCM2-219ENST00000544363 APBA2Q99767 749 aa33.73■■■□□ 2.99
CCM2-219ENST00000544363 PARVGQ9HBI0 331 aa33.73■■■□□ 2.99
CCM2-219ENST00000544363 GH1P01241 217 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms