RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 TRAPPC12Q8WVT3 735 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 TMEM40Q8WWA1 233 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 PIBF1Q8WXW3 757 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 ATOH1Q92858 354 aaPredicted RBP10.93□□□□□ -0.66
C2CD3-220ENST00000544293 RIPOR3Q96MK2 946 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 FAM49AQ9H0Q0 323 aaPredicted RBP10.93□□□□□ -0.66
C2CD3-220ENST00000544293 SMOC2Q9H3U7 446 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 TLE6Q9H808 572 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 ERAP1Q9NZ08 941 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 IGSF9BQ9UPX0 1349 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 DMDP11532 3685 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 CYP21A2P08686 494 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 ANTXR2P58335 489 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 IGBP1P78318 339 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 FAM189BP81408 668 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 TMEM266Q2M3C6 531 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 XRRA1Q6P2D8 792 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 LRRC55Q6ZSA7 311 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 TMEM105Q8N8V8 129 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 CYP2W1Q8TAV3 490 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 GPRASP2Q96D09 838 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 FTHL17Q9BXU8 183 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 CELF4Q9BZC1 486 aaKnown RBP10.92□□□□□ -0.66
C2CD3-220ENST00000544293 CWH43Q9H720 699 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 CNNM2Q9H8M5 875 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 ERVK-5Q9HDB9 667 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 TYW1Q9NV66 732 aaKnown RBP10.92□□□□□ -0.66
C2CD3-220ENST00000544293 PCDHA2Q9Y5H9 948 aa10.92□□□□□ -0.66
C2CD3-220ENST00000544293 RIF1Q5UIP0 2472 aaKnown RBP10.92□□□□□ -0.66
C2CD3-220ENST00000544293 KDM3AQ9Y4C1 1321 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 HIDE1A8MVS5 230 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 FGF18O76093 207 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 SCG2P13521 617 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 PTH1RQ03431 593 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 APOBRQ0VD83 1088 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 PLCB4Q15147 1175 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 B4GALNT3Q6L9W6 998 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 ANKRD54Q6NXT1 300 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 RSPH3Q86UC2 560 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 NLRX1Q86UT6 975 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 APOL5Q9BWW9 433 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 SMARCAD1Q9H4L7 1026 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 RNF19AQ9NV58 838 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 PKD2L1Q9P0L9 805 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 ZBTB47Q9UFB7 747 aaPredicted RBP10.91□□□□□ -0.66
C2CD3-220ENST00000544293 NOC2LQ9Y3T9 749 aaKnown RBP10.91□□□□□ -0.66
C2CD3-220ENST00000544293 TRPV2Q9Y5S1 764 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 ATG2AQ2TAZ0 1938 aa10.91□□□□□ -0.66
C2CD3-220ENST00000544293 RRN3P2A6NIE6 340 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 C9IYK1 514 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 IFIT3O14879 490 aaKnown RBP10.9□□□□□ -0.66
C2CD3-220ENST00000544293 GALR2O43603 387 aaPredicted RBP10.9□□□□□ -0.66
C2CD3-220ENST00000544293 BRD1O95696 1058 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 SARSP49591 514 aaKnown RBP10.9□□□□□ -0.66
C2CD3-220ENST00000544293 NUCB1Q02818 461 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 UBE3AQ05086 875 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 IER5Q5VY09 327 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 MTHFD1LQ6UB35 978 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 CHD1LQ86WJ1 897 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 KIAA0319LQ8IZA0 1049 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 SRBD1Q8N5C6 995 aaKnown RBP10.9□□□□□ -0.66
C2CD3-220ENST00000544293 GIMAP8Q8ND71 665 aaPredicted RBP10.9□□□□□ -0.66
C2CD3-220ENST00000544293 SMARCC2Q8TAQ2 1214 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 RASGRP4Q8TDF6 673 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 MICAL1Q8TDZ2 1067 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 GLG1Q92896 1179 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 PPP2R3CQ969Q6 453 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 JADE2Q9NQC1 790 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 RTN4Q9NQC3 1192 aaKnown RBP10.9□□□□□ -0.66
C2CD3-220ENST00000544293 RGS18Q9NS28 235 aa10.9□□□□□ -0.66
C2CD3-220ENST00000544293 IGKV6D-21A0A0A0MT36 114 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 SMIM35A0A1B0GVV1 85 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 PRR23AA6NEV1 266 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 TBKBP1A7MCY6 615 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 ATG7O95352 703 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 STAG3L1P0CL83 205 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 SP100P23497 879 aaPredicted RBP10.89□□□□□ -0.67
C2CD3-220ENST00000544293 NBL1P41271 181 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 TECP42680 631 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 PLCB3Q01970 1234 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 TRAF1Q13077 416 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 DSC3Q14574 896 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 CMTR1Q8N1G2 835 aaKnown RBP10.89□□□□□ -0.67
C2CD3-220ENST00000544293 COLGALT1Q8NBJ5 622 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 KREMEN2Q8NCW0 462 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 NEK1Q96PY6 1258 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 CDCA3Q99618 268 aaPredicted RBP10.89□□□□□ -0.67
C2CD3-220ENST00000544293 MYL10Q9BUA6 226 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 SPZ1Q9BXG8 430 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 DIAPH3Q9NSV4 1193 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 ST3GAL5Q9UNP4 418 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 DCHS1Q96JQ0 3298 aa10.89□□□□□ -0.67
C2CD3-220ENST00000544293 MYH7BA7E2Y1 1941 aa10.88□□□□□ -0.67
C2CD3-220ENST00000544293 ZBTB42B2RXF5 422 aa10.88□□□□□ -0.67
C2CD3-220ENST00000544293 C2CD4DB7Z1M9 353 aa10.88□□□□□ -0.67
C2CD3-220ENST00000544293 E7EWF7 191 aa10.88□□□□□ -0.67
C2CD3-220ENST00000544293 PLEKHA8P1O95397 391 aa10.88□□□□□ -0.67
C2CD3-220ENST00000544293 CCNE2O96020 404 aa10.88□□□□□ -0.67
C2CD3-220ENST00000544293 FGFR1P11362 822 aa10.88□□□□□ -0.67
C2CD3-220ENST00000544293 ATP4AP20648 1035 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms