RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
COPS7A-217ENST00000543537 CYP3A7-CYP3A51PA0A087WV96 503 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 GOLGA6L6A8MZA4 724 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 PFKMP08237 780 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 MYL3P08590 195 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 CYP3A7P24462 503 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 HOXA13P31271 388 aaPredicted RBP12.87□□□□□ -0.35
COPS7A-217ENST00000543537 ICAM3P32942 547 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 MCM7P33993 719 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 NLRP12P59046 1061 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 RBL2Q08999 1139 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 DGKDQ16760 1214 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 NT5DC1Q5TFE4 455 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 XRRA1Q6P2D8 792 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 ZNF365Q70YC5 407 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 TBCKQ8TEA7 893 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 KAT2BQ92831 832 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 INPP4AQ96PE3 977 aaPredicted RBP12.87□□□□□ -0.35
COPS7A-217ENST00000543537 PPP1R12CQ9BZL4 782 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 CSRNP2Q9H175 543 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 WNT8AQ9H1J5 351 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 SEMA6BQ9H3T3 888 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 GOLPH3LQ9H4A5 285 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 TRMT13Q9NUP7 481 aaKnown RBP12.87□□□□□ -0.35
COPS7A-217ENST00000543537 MRVI1Q9Y6F6 885 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 UMODL1Q5DID0 1318 aa12.87□□□□□ -0.35
COPS7A-217ENST00000543537 HAS3O00219 553 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 MEIS2O14770 477 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 MARCH6O60337 910 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 CCNT1O60563 726 aaKnown RBP12.86□□□□□ -0.35
COPS7A-217ENST00000543537 PPFIA4O75335 1185 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 F2P00734 622 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 PRKCSHP14314 528 aaPredicted RBP12.86□□□□□ -0.35
COPS7A-217ENST00000543537 CCND2P30279 289 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 FXR2P51116 673 aaKnown RBP eCLIP12.86□□□□□ -0.35
COPS7A-217ENST00000543537 INF2Q27J81 1249 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 LETM2Q2VYF4 491 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 CELF3Q5SZQ8 465 aaKnown RBP12.86□□□□□ -0.35
COPS7A-217ENST00000543537 TYW1BQ6NUM6 668 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 RPUSD2Q8IZ73 545 aaKnown RBP12.86□□□□□ -0.35
COPS7A-217ENST00000543537 C4orf32Q8N8J7 132 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 IL31RAQ8NI17 732 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 SMARCE1Q969G3 411 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 FAM20AQ96MK3 541 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 CTAGE1Q96RT6 745 aa12.86□□□□□ -0.35
COPS7A-217ENST00000543537 TTYH1Q9H313 450 aaPredicted RBP12.86□□□□□ -0.35
COPS7A-217ENST00000543537 VWA3AA6NCI4 1184 aa12.85□□□□□ -0.35
COPS7A-217ENST00000543537 IKBKBO14920 756 aa12.85□□□□□ -0.35
COPS7A-217ENST00000543537 POLR2DO15514 142 aaKnown RBP12.85□□□□□ -0.35
COPS7A-217ENST00000543537 CYP3A4P08684 503 aa12.85□□□□□ -0.35
COPS7A-217ENST00000543537 RFC2P35250 354 aa12.85□□□□□ -0.35
COPS7A-217ENST00000543537 MRPS9P82933 396 aaKnown RBP12.85□□□□□ -0.35
COPS7A-217ENST00000543537 POSTNQ15063 836 aa12.85□□□□□ -0.35
COPS7A-217ENST00000543537 CALCRLQ16602 461 aa12.85□□□□□ -0.35
COPS7A-217ENST00000543537 CKAP2LQ8IYA6 745 aa12.85□□□□□ -0.35
COPS7A-217ENST00000543537 KATNAL1Q9BW62 490 aa12.85□□□□□ -0.35
COPS7A-217ENST00000543537 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
COPS7A-217ENST00000543537 MTIF3Q9H2K0 278 aaKnown RBP12.85□□□□□ -0.35
COPS7A-217ENST00000543537 STK17AQ9UEE5 414 aa12.85□□□□□ -0.35
COPS7A-217ENST00000543537 MYH15Q9Y2K3 1946 aa12.85□□□□□ -0.35
COPS7A-217ENST00000543537 FGBP02675 491 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 ACRP10323 421 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 CYP2C9P11712 490 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 MYCLP12524 364 aaPredicted RBP12.84□□□□□ -0.35
COPS7A-217ENST00000543537 UBA1P22314 1058 aaKnown RBP12.84□□□□□ -0.35
COPS7A-217ENST00000543537 DNAJB2P25686 324 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 CIITAP33076 1130 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 SP2Q02086 613 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 GNPTABQ3T906 1256 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 JAKMIP3Q5VZ66 844 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 RRAGBQ5VZM2 374 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 KRT79Q5XKE5 535 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 PCNX4Q63HM2 1172 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.84□□□□□ -0.35
COPS7A-217ENST00000543537 FCHSD1Q86WN1 690 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 DHX37Q8IY37 1157 aaKnown RBP12.84□□□□□ -0.35
COPS7A-217ENST00000543537 RASSF8Q8NHQ8 419 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 ERMNQ8TAM6 284 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 SPATA20Q8TB22 786 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 CAGE1Q8TC20 777 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 PDLIM2Q96JY6 352 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 MBOAT7Q96N66 472 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 CLIC6Q96NY7 704 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 SENP7Q9BQF6 1050 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 GTF2IRD1Q9UHL9 959 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 KDM3AQ9Y4C1 1321 aa12.84□□□□□ -0.35
COPS7A-217ENST00000543537 SPATA31C2B4DYI2 1134 aa12.83□□□□□ -0.36
COPS7A-217ENST00000543537 PARNO95453 639 aaKnown RBP12.83□□□□□ -0.36
COPS7A-217ENST00000543537 IQCF3P0C7M6 154 aa12.83□□□□□ -0.36
COPS7A-217ENST00000543537 MUTP22033 750 aa12.83□□□□□ -0.36
COPS7A-217ENST00000543537 ERCC5P28715 1186 aaPredicted RBP12.83□□□□□ -0.36
COPS7A-217ENST00000543537 HOXC8P31273 242 aa12.83□□□□□ -0.36
COPS7A-217ENST00000543537 SREBF1P36956 1147 aa12.83□□□□□ -0.36
COPS7A-217ENST00000543537 CCL23P55773 120 aa12.83□□□□□ -0.36
COPS7A-217ENST00000543537 BFSP2Q13515 415 aa12.83□□□□□ -0.36
COPS7A-217ENST00000543537 HSDL1Q3SXM5 330 aa12.83□□□□□ -0.36
COPS7A-217ENST00000543537 LONRF3Q496Y0 759 aa12.83□□□□□ -0.36
COPS7A-217ENST00000543537 Q4G0T1 1027 aa12.83□□□□□ -0.36
COPS7A-217ENST00000543537 TPRNQ4KMQ1 711 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms