RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 ZHX3Q9H4I2 956 aa25.85■■□□□ 1.73
SHD-201ENST00000543264 CNOT10Q9H9A5 744 aaKnown RBP25.85■■□□□ 1.73
SHD-201ENST00000543264 FAM114A2Q9NRY5 505 aa25.85■■□□□ 1.73
SHD-201ENST00000543264 PPIP5K2O43314 1243 aa25.85■■□□□ 1.73
SHD-201ENST00000543264 GHRP10912 638 aa25.85■■□□□ 1.73
SHD-201ENST00000543264 MRPL12P52815 198 aaKnown RBP25.85■■□□□ 1.73
SHD-201ENST00000543264 MARSP56192 900 aaKnown RBP25.85■■□□□ 1.73
SHD-201ENST00000543264 MAPKAPK5Q8IW41 473 aa25.85■■□□□ 1.73
SHD-201ENST00000543264 E9PMD0 336 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 UCHL3P15374 230 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 HOXA7P31268 230 aaPredicted RBP25.84■■□□□ 1.73
SHD-201ENST00000543264 TNNI2P48788 182 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 CLNS1AP54105 237 aaKnown RBP25.84■■□□□ 1.73
SHD-201ENST00000543264 BICDL1Q6ZP65 573 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 SCFD1Q8WVM8 642 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 GOPCQ9HD26 462 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 EMILIN3Q9NT22 766 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 DIXDC1Q155Q3 683 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 CCDC65Q8IXS2 484 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 KIRREL3Q8IZU9 778 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 LMBR1Q8WVP7 490 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 TLCD1Q96CP7 247 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 EYA3Q99504 573 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 SELENOSQ9BQE4 189 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 FAM129AQ9BZQ8 928 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 HDAC9Q9UKV0 1011 aa25.84■■□□□ 1.73
SHD-201ENST00000543264 TLDC2A0PJX2 215 aa25.83■■□□□ 1.73
SHD-201ENST00000543264 CETN3O15182 167 aa25.83■■□□□ 1.73
SHD-201ENST00000543264 PPP1R12BO60237 982 aaPredicted RBP25.83■■□□□ 1.73
SHD-201ENST00000543264 CHN1P15882 459 aa25.83■■□□□ 1.73
SHD-201ENST00000543264 RASGEF1CQ8N431 466 aa25.83■■□□□ 1.73
SHD-201ENST00000543264 FMO2Q99518 471 aa25.83■■□□□ 1.73
SHD-201ENST00000543264 KCTD10Q9H3F6 313 aa25.83■■□□□ 1.73
SHD-201ENST00000543264 NOD2Q9HC29 1040 aa25.83■■□□□ 1.73
SHD-201ENST00000543264 NR2E1Q9Y466 385 aa25.83■■□□□ 1.73
SHD-201ENST00000543264 BZW2Q9Y6E2 419 aaKnown RBP25.83■■□□□ 1.73
SHD-201ENST00000543264 FLOT1O75955 427 aa25.83■■□□□ 1.72
SHD-201ENST00000543264 ATP6V1G2O95670 118 aa25.83■■□□□ 1.72
SHD-201ENST00000543264 SEPT2Q15019 361 aa25.83■■□□□ 1.72
SHD-201ENST00000543264 ADAT2Q7Z6V5 191 aaKnown RBP25.83■■□□□ 1.72
SHD-201ENST00000543264 RBM46Q8TBY0 533 aaKnown RBP25.83■■□□□ 1.72
SHD-201ENST00000543264 SUCLA2Q9P2R7 463 aaPredicted RBP25.83■■□□□ 1.72
SHD-201ENST00000543264 STRCP1A6NGW2 1772 aa25.83■■□□□ 1.72
SHD-201ENST00000543264 USP17L5A8MUK1 530 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 FGGP02679 453 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 SHBGP04278 402 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 H2AFZP0C0S5 128 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 ADCY7P51828 1080 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 H2AFVQ71UI9 128 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 STXBP5LQ9Y2K9 1186 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 PCDHA2Q9Y5H9 948 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 FRMPD2Q68DX3 1309 aaPredicted RBP25.82■■□□□ 1.72
SHD-201ENST00000543264 NR2F2P24468 414 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 GBP2P32456 591 aaPredicted RBP25.82■■□□□ 1.72
SHD-201ENST00000543264 SPTY2D1Q68D10 685 aaPredicted RBP25.82■■□□□ 1.72
SHD-201ENST00000543264 TAX1BP1Q86VP1 789 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 ANKS4BQ8N8V4 417 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 ATP6V0A4Q9HBG4 840 aa25.82■■□□□ 1.72
SHD-201ENST00000543264 SMIM23A6NLE4 172 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 MMEP08473 750 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 EIF3BP55884 814 aaKnown RBP25.81■■□□□ 1.72
SHD-201ENST00000543264 RPS8P62241 208 aaKnown RBP25.81■■□□□ 1.72
SHD-201ENST00000543264 PRPF4BQ13523 1007 aaKnown RBP25.81■■□□□ 1.72
SHD-201ENST00000543264 NBPF9Q3BBW0 867 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 NT5DC3Q86UY8 548 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 TCP11Q8WWU5 503 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 SEC14L1Q92503 715 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 KIAA1024Q9UPX6 916 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 ESYT2A0FGR8 921 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 LDHBP07195 334 aaKnown RBP25.81■■□□□ 1.72
SHD-201ENST00000543264 NT5C2P49902 561 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 ITPK1Q13572 414 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 ACCSLQ4AC99 568 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 SLFN11Q7Z7L1 901 aa25.81■■□□□ 1.72
SHD-201ENST00000543264 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.81■■□□□ 1.72
SHD-201ENST00000543264 FAM170AA1A519 330 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 PPFIA2O75334 1257 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 CLTAP09496 248 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 COPB2P35606 906 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 EXOC3L4Q17RC7 722 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 GPBP1Q86WP2 473 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 U2AF1L4Q8WU68 220 aaKnown RBP25.8■■□□□ 1.72
SHD-201ENST00000543264 CENPTQ96BT3 561 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 ZNF317Q96PQ6 595 aaPredicted RBP25.8■■□□□ 1.72
SHD-201ENST00000543264 ZNF652Q9Y2D9 606 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 ROBO3Q96MS0 1386 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 PON1P27169 355 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 CDK8P49336 464 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 DPY19L2P1Q6NXN4 242 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 TLDC1Q6P9B6 456 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 PNMA8AQ86V59 439 aaPredicted RBP25.8■■□□□ 1.72
SHD-201ENST00000543264 HOOK3Q86VS8 718 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 CCDC63Q8NA47 563 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 ATP8B4Q8TF62 1192 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 HAS1Q92839 578 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 CUL5Q93034 780 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 DDX25Q9UHL0 483 aaKnown RBP25.8■■□□□ 1.72
SHD-201ENST00000543264 PCDHA12Q9UN75 941 aa25.8■■□□□ 1.72
SHD-201ENST00000543264 KRT18P05783 430 aaKnown RBP25.79■■□□□ 1.72
SHD-201ENST00000543264 PLA2G4BP0C869 781 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms