RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 ZMYND12Q9H0C1 365 aa10.59□□□□□ -0.71
TCF4-208ENST00000543082 DPH5Q9H2P9 285 aa10.59□□□□□ -0.71
TCF4-208ENST00000543082 SUCLA2Q9P2R7 463 aaPredicted RBP10.59□□□□□ -0.71
TCF4-208ENST00000543082 STK17AQ9UEE5 414 aa10.59□□□□□ -0.71
TCF4-208ENST00000543082 ADAMTS1Q9UHI8 967 aa10.59□□□□□ -0.71
TCF4-208ENST00000543082 NUP98P52948 1817 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 SHANK3Q9BYB0 1731 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 STXBP3O00186 592 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 ABLIM1O14639 778 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 SNX3O60493 162 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 LINGO3P0C6S8 592 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 SSR1P43307 286 aaKnown RBP10.58□□□□□ -0.72
TCF4-208ENST00000543082 PSMD2Q13200 908 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 TAF11Q15544 211 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 GRIPAP1Q4V328 841 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 ERICH1Q86X53 443 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 MFN1Q8IWA4 741 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 SYCE1Q8N0S2 351 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 PRMT1Q99873 361 aaKnown RBP10.58□□□□□ -0.72
TCF4-208ENST00000543082 OSBPL1AQ9BXW6 950 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 PABPC3Q9H361 631 aaKnown RBP10.58□□□□□ -0.72
TCF4-208ENST00000543082 LRRC4CQ9HCJ2 640 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.58□□□□□ -0.72
TCF4-208ENST00000543082 USP15Q9Y4E8 981 aaPredicted RBP10.58□□□□□ -0.72
TCF4-208ENST00000543082 SMIM22K7EJ46 135 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 O00370 1275 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 SUN1O94901 812 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 FERP16591 822 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 MSH2P43246 934 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 RAB27AP51159 221 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 PMS2P54278 862 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 LMNB2Q03252 620 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 BNIP1Q12981 228 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 C6orf118Q5T5N4 469 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 SLC30A9Q6PML9 568 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 PEX26Q7Z412 305 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 FAM133AQ8N9E0 248 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 ATP8B4Q8TF62 1192 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 AZI2Q9H6S1 392 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 ARHGEF3Q9NR81 526 aa10.58□□□□□ -0.72
TCF4-208ENST00000543082 EVI5O60447 810 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 AP1G2O75843 785 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 GNA14O95837 355 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 ITGA4P13612 1032 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 ANXA13P27216 316 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 FKBP3Q00688 224 aaKnown RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 ARID5AQ03989 594 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 PDCD2Q16342 344 aaPredicted RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 ADGRA1Q86SQ6 560 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 REM2Q8IYK8 340 aaPredicted RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 PIP4P2Q8N4L2 257 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 PROCA1Q8NCQ7 364 aaPredicted RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 TPCN2Q8NHX9 752 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 ZCRB1Q8TBF4 217 aaKnown RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 PRCCQ92733 491 aaPredicted RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 CEP63Q96MT8 703 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 LRRC27Q9C0I9 530 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 EPB41L4BQ9H329 900 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 TTC7AQ9ULT0 858 aaPredicted RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.57□□□□□ -0.72
TCF4-208ENST00000543082 BZW2Q9Y6E2 419 aaKnown RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 CYP2D7A0A087X1C5 515 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 A0A0A6YYK5 440 aaPredicted RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 FAM187AA6NFU0 413 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 MYMKA6NI61 221 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 SHBGP04278 402 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 KRT16P08779 473 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 CDC25CP30307 473 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 ABL2P42684 1182 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 POU5F1Q01860 360 aaKnown RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 ORC2Q13416 577 aaPredicted RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 BTNL9Q6UXG8 535 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 TAOK1Q7L7X3 1001 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 KRT25Q7Z3Z0 450 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 SLFN11Q7Z7L1 901 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 SPICE1Q8N0Z3 855 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 NAF1Q96HR8 494 aaKnown RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 RAB3IPQ96QF0 476 aaPredicted RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 TSC22D3Q99576 134 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 RIOK1Q9BRS2 568 aaKnown RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 TRIM51Q9BSJ1 452 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 TMEM109Q9BVC6 243 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 CELF4Q9BZC1 486 aaKnown RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 GANQ9H2C0 597 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 ZDHHC18Q9NUE0 388 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 ADAM22Q9P0K1 906 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 CNOT7Q9UIV1 285 aaKnown RBP10.57□□□□□ -0.72
TCF4-208ENST00000543082 STXBP5LQ9Y2K9 1186 aa10.57□□□□□ -0.72
TCF4-208ENST00000543082 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.56□□□□□ -0.72
TCF4-208ENST00000543082 KIAA1551Q9HCM1 1747 aa10.56□□□□□ -0.72
TCF4-208ENST00000543082 E7ENQ6 273 aa10.56□□□□□ -0.72
TCF4-208ENST00000543082 ATP4AP20648 1035 aa10.56□□□□□ -0.72
TCF4-208ENST00000543082 GBP1P32455 592 aa10.56□□□□□ -0.72
TCF4-208ENST00000543082 SKIV2L2P42285 1042 aaKnown RBP10.56□□□□□ -0.72
TCF4-208ENST00000543082 CTCFP49711 727 aaPredicted RBP10.56□□□□□ -0.72
TCF4-208ENST00000543082 GNAQP50148 359 aa10.56□□□□□ -0.72
TCF4-208ENST00000543082 RPS6KA3P51812 740 aa10.56□□□□□ -0.72
TCF4-208ENST00000543082 PTENP60484 403 aa10.56□□□□□ -0.72
TCF4-208ENST00000543082 CMPK2Q5EBM0 449 aa10.56□□□□□ -0.72
TCF4-208ENST00000543082 DUPD1Q68J44 220 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms