RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 EIF3CQ99613 913 aaKnown RBP15.63■□□□□ 0.09
LDB3-207ENST00000542786 STRA6Q9BX79 667 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 NHEJ1Q9H9Q4 299 aaPredicted RBP15.63■□□□□ 0.09
LDB3-207ENST00000542786 RNF146Q9NTX7 359 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 ODF2LQ9ULJ1 636 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 ZNF263O14978 683 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 CETN3O15182 167 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 ERCC3P19447 782 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 EIF2AK2P19525 551 aaKnown RBP15.63■□□□□ 0.09
LDB3-207ENST00000542786 PDXDC1Q6P996 788 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 RNF207Q6ZRF8 634 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 FRMD5Q7Z6J6 570 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.63■□□□□ 0.09
LDB3-207ENST00000542786 BORCS6Q96GS4 357 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 PCMTD1Q96MG8 357 aaPredicted RBP15.63■□□□□ 0.09
LDB3-207ENST00000542786 ARHGAP20Q9P2F6 1191 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 MYO1AQ9UBC5 1043 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 SEL1LQ9UBV2 794 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.63■□□□□ 0.09
LDB3-207ENST00000542786 FAM184BQ9ULE4 1060 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 AFG3L2Q9Y4W6 797 aa15.63■□□□□ 0.09
LDB3-207ENST00000542786 V9GYY5 206 aaPredicted RBP15.63■□□□□ 0.09
LDB3-207ENST00000542786 RCCD1A6NED2 376 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 SFI1A8K8P3 1242 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 DDX39AO00148 427 aaKnown RBP15.62■□□□□ 0.09
LDB3-207ENST00000542786 PPP1R37O75864 691 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 FAM13AO94988 1023 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 LCA5LO95447 670 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 NR3C1P04150 777 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 NMT1P30419 496 aaKnown RBP15.62■□□□□ 0.09
LDB3-207ENST00000542786 ELF2Q15723 593 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 TSR1Q2NL82 804 aaKnown RBP15.62■□□□□ 0.09
LDB3-207ENST00000542786 MIER3Q7Z3K6 550 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 SLC35F6Q8N357 371 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 ZNF397Q8NF99 534 aaPredicted RBP15.62■□□□□ 0.09
LDB3-207ENST00000542786 PDCL3Q9H2J4 239 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 MMRN2Q9H8L6 949 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 PARVGQ9HBI0 331 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 PKD2L1Q9P0L9 805 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 TRIM10Q9UDY6 481 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 DBR1Q9UK59 544 aaKnown RBP15.62■□□□□ 0.09
LDB3-207ENST00000542786 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.62■□□□□ 0.09
LDB3-207ENST00000542786 UBE4BO95155 1302 aa15.62■□□□□ 0.09
LDB3-207ENST00000542786 SLC16A3O15427 465 aaKnown RBP15.61■□□□□ 0.09
LDB3-207ENST00000542786 CALUO43852 315 aaPredicted RBP15.61■□□□□ 0.09
LDB3-207ENST00000542786 AKAP3O75969 853 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 GCNT3O95395 438 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 PLEKP08567 350 aaPredicted RBP15.61■□□□□ 0.09
LDB3-207ENST00000542786 MTMR1Q13613 665 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 BAATQ14032 418 aaPredicted RBP15.61■□□□□ 0.09
LDB3-207ENST00000542786 ASTE1Q2TB18 679 aaPredicted RBP15.61■□□□□ 0.09
LDB3-207ENST00000542786 ARHGAP29Q52LW3 1261 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 SH3D19Q5HYK7 790 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 ZNF569Q5MCW4 686 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 XRRA1Q6P2D8 792 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 CATSPERGQ6ZRH7 1159 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 RMDN3Q96TC7 470 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 CARD6Q9BX69 1037 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 GANQ9H2C0 597 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 IKZF4Q9H2S9 585 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 ZNHIT6Q9NWK9 470 aaKnown RBP15.61■□□□□ 0.09
LDB3-207ENST00000542786 CEP72Q9P209 647 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 LRRC53A6NM62 1247 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 ATP9AO75110 1047 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 USP2O75604 605 aaPredicted RBP15.61■□□□□ 0.09
LDB3-207ENST00000542786 CCNE2O96020 404 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 P4HBP07237 508 aaKnown RBP15.61■□□□□ 0.09
LDB3-207ENST00000542786 LCTP09848 1927 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 COG2Q14746 738 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 TMEM132BQ14DG7 1078 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 HGSNATQ68CP4 663 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 ZNF720Q7Z2F6 126 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 VSIG10LQ86VR7 867 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 HAUS4Q9H6D7 363 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 ZSWIM4Q9H7M6 989 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 TBC1D22BQ9NU19 505 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 SNCAIPQ9Y6H5 919 aa15.61■□□□□ 0.09
LDB3-207ENST00000542786 OTOFQ9HC10 1997 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 A0A0G2JMZ2 1700 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 MYPNQ86TC9 1320 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 TLR2O60603 784 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 CYLC1P35663 651 aaPredicted RBP15.6■□□□□ 0.09
LDB3-207ENST00000542786 CASP4P49662 377 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 AMPD2Q01433 879 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 UGCGQ16739 394 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 ERCC6LQ2NKX8 1250 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 ZC2HC1CQ53FD0 456 aaPredicted RBP15.6■□□□□ 0.09
LDB3-207ENST00000542786 NSMFQ6X4W1 530 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 MYCT1Q8N699 235 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 NEK11Q8NG66 645 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 SYN2Q92777 582 aaPredicted RBP15.6■□□□□ 0.09
LDB3-207ENST00000542786 LSM14BQ9BX40 385 aaKnown RBP15.6■□□□□ 0.09
LDB3-207ENST00000542786 LACRTQ9GZZ8 138 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 PTPRFP10586 1907 aa15.6■□□□□ 0.09
LDB3-207ENST00000542786 ARHGEF35A5YM69 484 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 HIP1RO75146 1068 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 KRT83P78385 493 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 APBA1Q02410 837 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 PPP2R3AQ06190 1150 aa15.59■□□□□ 0.09
LDB3-207ENST00000542786 KCNH2Q12809 1159 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms