RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 XRCC6P12956 609 aaKnown RBP eCLIP25.85■■□□□ 1.73
HOMER3-205ENST00000542541 MCM4P33991 863 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 GJA8P48165 433 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 XKR3Q5GH77 459 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 RRAGBQ5VZM2 374 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 POTEBQ6S5H4 581 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 OTUD6AQ7L8S5 288 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 TRIM50Q86XT4 487 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 LMBRD1Q9NUN5 540 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 DDX19AQ9NUU7 478 aaKnown RBP25.85■■□□□ 1.73
HOMER3-205ENST00000542541 DNM3Q9UQ16 869 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 GADD45BO75293 160 aaPredicted RBP25.84■■□□□ 1.73
HOMER3-205ENST00000542541 PFKFB1P16118 471 aa25.84■■□□□ 1.73
HOMER3-205ENST00000542541 ACLYP53396 1101 aa25.84■■□□□ 1.73
HOMER3-205ENST00000542541 PRKCEQ02156 737 aa25.84■■□□□ 1.73
HOMER3-205ENST00000542541 GRB10Q13322 594 aa25.84■■□□□ 1.73
HOMER3-205ENST00000542541 CXCL17Q6UXB2 119 aa25.84■■□□□ 1.73
HOMER3-205ENST00000542541 FRMPD3Q5JV73 1810 aa25.83■■□□□ 1.73
HOMER3-205ENST00000542541 DDX11L8A8MPP1 907 aa25.83■■□□□ 1.73
HOMER3-205ENST00000542541 ZNF862O60290 1169 aa25.83■■□□□ 1.73
HOMER3-205ENST00000542541 TMEM119Q4V9L6 283 aa25.83■■□□□ 1.73
HOMER3-205ENST00000542541 POTEGQ6S5H5 508 aa25.83■■□□□ 1.73
HOMER3-205ENST00000542541 IQUBQ8NA54 791 aa25.83■■□□□ 1.73
HOMER3-205ENST00000542541 BBXQ8WY36 941 aaPredicted RBP25.83■■□□□ 1.73
HOMER3-205ENST00000542541 PNMA5Q96PV4 448 aa25.83■■□□□ 1.73
HOMER3-205ENST00000542541 PANK2Q9BZ23 570 aa25.83■■□□□ 1.73
HOMER3-205ENST00000542541 WRAP73Q9P2S5 460 aaPredicted RBP25.83■■□□□ 1.73
HOMER3-205ENST00000542541 HPSEQ9Y251 543 aa25.83■■□□□ 1.73
HOMER3-205ENST00000542541 OATP04181 439 aa25.82■■□□□ 1.72
HOMER3-205ENST00000542541 YWHABP31946 246 aaKnown RBP25.82■■□□□ 1.72
HOMER3-205ENST00000542541 ECM1Q16610 540 aa25.82■■□□□ 1.72
HOMER3-205ENST00000542541 PDILTQ8N807 584 aa25.82■■□□□ 1.72
HOMER3-205ENST00000542541 ATP8B4Q8TF62 1192 aa25.82■■□□□ 1.72
HOMER3-205ENST00000542541 KAT2BQ92831 832 aa25.82■■□□□ 1.72
HOMER3-205ENST00000542541 PLIN2Q99541 437 aa25.82■■□□□ 1.72
HOMER3-205ENST00000542541 STK17AQ9UEE5 414 aa25.82■■□□□ 1.72
HOMER3-205ENST00000542541 PLCG1P19174 1290 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 ATP4AP20648 1035 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 PTMSP20962 102 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 MARK3P27448 753 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 STAT6P42226 847 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 SYKP43405 635 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 MFSD10Q14728 455 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 ANKLE1Q8NAG6 615 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 GLT1D1Q96MS3 346 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 ANKEF1Q9NU02 776 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 PHF24Q9UPV7 400 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 TRPC6Q9Y210 931 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 POLR2DO15514 142 aaKnown RBP25.81■■□□□ 1.72
HOMER3-205ENST00000542541 HBP1O60381 514 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 PSEN2P49810 448 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 NDUFA8P51970 172 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 PLCB4Q15147 1175 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 KIAA0753Q2KHM9 967 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 TRMT1LQ7Z2T5 733 aaKnown RBP25.81■■□□□ 1.72
HOMER3-205ENST00000542541 VTI1AQ96AJ9 217 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 CCDC43Q96MW1 224 aaKnown RBP25.81■■□□□ 1.72
HOMER3-205ENST00000542541 CUEDC2Q9H467 287 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 USP25Q9UHP3 1055 aa25.81■■□□□ 1.72
HOMER3-205ENST00000542541 HAS3O00219 553 aa25.8■■□□□ 1.72
HOMER3-205ENST00000542541 FAM160A1Q05DH4 1040 aa25.8■■□□□ 1.72
HOMER3-205ENST00000542541 PIGOQ8TEQ8 1089 aa25.8■■□□□ 1.72
HOMER3-205ENST00000542541 NIFKQ9BYG3 293 aaKnown RBP25.8■■□□□ 1.72
HOMER3-205ENST00000542541 RNPEPQ9H4A4 650 aa25.8■■□□□ 1.72
HOMER3-205ENST00000542541 GOLPH3LQ9H4A5 285 aa25.8■■□□□ 1.72
HOMER3-205ENST00000542541 DBR1Q9UK59 544 aaKnown RBP25.8■■□□□ 1.72
HOMER3-205ENST00000542541 STBD1O95210 358 aa25.79■■□□□ 1.72
HOMER3-205ENST00000542541 CHMP4BP1P59074 171 aa25.79■■□□□ 1.72
HOMER3-205ENST00000542541 ANO5Q75V66 913 aa25.79■■□□□ 1.72
HOMER3-205ENST00000542541 SEPT9Q9UHD8 586 aaPredicted RBP25.79■■□□□ 1.72
HOMER3-205ENST00000542541 A0A087X0B3 334 aa25.78■■□□□ 1.72
HOMER3-205ENST00000542541 EYA4O95677 639 aa25.78■■□□□ 1.72
HOMER3-205ENST00000542541 PSMC6P62333 389 aa25.78■■□□□ 1.72
HOMER3-205ENST00000542541 DHX58Q96C10 678 aa25.78■■□□□ 1.72
HOMER3-205ENST00000542541 PPME1Q9Y570 386 aa25.78■■□□□ 1.72
HOMER3-205ENST00000542541 E9PMD0 336 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 ZNF202O95125 648 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 XKR9Q5GH70 373 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 ZNF484Q5JVG2 852 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 C7orf31Q8N865 590 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 RAD54LQ92698 747 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 CCDC34Q96HJ3 373 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 A0A1W2PQ45 241 aaPredicted RBP25.77■■□□□ 1.72
HOMER3-205ENST00000542541 A0A1W2PQY0 241 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 ZBTB39O15060 712 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 E2F4Q16254 413 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 KCNK18Q7Z418 384 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 CEP57L1Q8IYX8 460 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 FMR1NBQ8N0W7 255 aaPredicted RBP25.77■■□□□ 1.72
HOMER3-205ENST00000542541 ENGASEQ8NFI3 743 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 LARP4BQ92615 738 aaKnown RBP25.77■■□□□ 1.72
HOMER3-205ENST00000542541 CEP170P1Q96L14 293 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 SEZ6LQ9BYH1 1024 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 BHMT2Q9H2M3 363 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 STARD7Q9NQZ5 370 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 BLOC1S4Q9NUP1 217 aa25.77■■□□□ 1.72
HOMER3-205ENST00000542541 A0A087WWV3 80 aa25.76■■□□□ 1.71
HOMER3-205ENST00000542541 RRN3P2A6NIE6 340 aa25.76■■□□□ 1.71
HOMER3-205ENST00000542541 INSRRP14616 1297 aa25.76■■□□□ 1.71
HOMER3-205ENST00000542541 NBPF20Q3BBV1 942 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms