RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 CLRN2A0PK11 232 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 SPDYE3A6NKU9 549 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 CPP00450 1065 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 EPB41P11171 864 aaKnown RBP16.74■□□□□ 0.27
CNOT9-208ENST00000542068 CASP5P51878 434 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 MKRN4PQ13434 485 aaPredicted RBP16.74■□□□□ 0.27
CNOT9-208ENST00000542068 KDM7AQ6ZMT4 941 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 ZNF571Q7Z3V5 609 aaPredicted RBP16.74■□□□□ 0.27
CNOT9-208ENST00000542068 MDM1Q8TC05 714 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 INPP4AQ96PE3 977 aaPredicted RBP16.74■□□□□ 0.27
CNOT9-208ENST00000542068 EMILIN3Q9NT22 766 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 TSKSQ9UJT2 592 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 SART1O43290 800 aaKnown RBP16.74■□□□□ 0.27
CNOT9-208ENST00000542068 PLA2G4BP0C869 781 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 ICA1Q05084 483 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 ITIH3Q06033 890 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 IFFO1Q0D2I5 559 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 U2AF1L4Q8WU68 220 aaKnown RBP16.74■□□□□ 0.27
CNOT9-208ENST00000542068 DDTLA6NHG4 134 aaPredicted RBP16.74■□□□□ 0.27
CNOT9-208ENST00000542068 ZBTB5O15062 677 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 EDIL3O43854 480 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 CRKP46108 304 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 KRT71Q3SY84 523 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 GLE1Q53GS7 698 aaKnown RBP16.74■□□□□ 0.27
CNOT9-208ENST00000542068 CCDC174Q6PII3 467 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 PEX26Q7Z412 305 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 DNAJC19Q96DA6 116 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 TAF1DQ9H5J8 278 aaPredicted RBP16.74■□□□□ 0.27
CNOT9-208ENST00000542068 PCDHB13Q9Y5F0 798 aa16.74■□□□□ 0.27
CNOT9-208ENST00000542068 PHF20L1A8MW92 1017 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 TTI1O43156 1089 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 QPCTQ16769 361 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 ZNF572Q7Z3I7 529 aaPredicted RBP16.73■□□□□ 0.27
CNOT9-208ENST00000542068 DAAM2Q86T65 1068 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 SCLT1Q96NL6 688 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 TRIM51Q9BSJ1 452 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 RIOX1Q9H6W3 641 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 RIC8AQ9NPQ8 531 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 HDAC9Q9UKV0 1011 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 TCP10L2B9ZVM9 353 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 DDX39AO00148 427 aaKnown RBP16.73■□□□□ 0.27
CNOT9-208ENST00000542068 ALKBH5Q6P6C2 394 aaKnown RBP16.73■□□□□ 0.27
CNOT9-208ENST00000542068 CCDC121Q6ZUS5 278 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 MICALCLQ6ZW33 695 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 CCDC65Q8IXS2 484 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 ATP8A1Q9Y2Q0 1164 aa16.73■□□□□ 0.27
CNOT9-208ENST00000542068 CETN3O15182 167 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 KIF4AO95239 1232 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 SHMT1P34896 483 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 METTL13Q8N6R0 699 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 RDH13Q8NBN7 331 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 CYP2W1Q8TAV3 490 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 PIGOQ8TEQ8 1089 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 SCFD1Q8WVM8 642 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 CABS1Q96KC9 395 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 COA1Q9GZY4 146 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 NOC2LQ9Y3T9 749 aaKnown RBP16.72■□□□□ 0.27
CNOT9-208ENST00000542068 CHRNA5P30532 468 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 MAGOHP61326 146 aaKnown RBP16.72■□□□□ 0.27
CNOT9-208ENST00000542068 SPRED3Q2MJR0 410 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 HAS1Q92839 578 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 MAGOHBQ96A72 148 aaKnown RBP16.72■□□□□ 0.27
CNOT9-208ENST00000542068 IQCDQ96DY2 449 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 VEZTQ9HBM0 779 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 GFPT2O94808 682 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 DHX9Q08211 1270 aaKnown RBP16.72■□□□□ 0.27
CNOT9-208ENST00000542068 ITGB3BPQ13352 177 aaPredicted RBP16.72■□□□□ 0.27
CNOT9-208ENST00000542068 ZNF211Q13398 564 aaPredicted RBP16.72■□□□□ 0.27
CNOT9-208ENST00000542068 UAP1Q16222 522 aaPredicted RBP16.72■□□□□ 0.27
CNOT9-208ENST00000542068 WHAMMQ8TF30 809 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 CYFIP2Q96F07 1278 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 ANO3Q9BYT9 981 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 CCDC113Q9H0I3 377 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.72■□□□□ 0.27
CNOT9-208ENST00000542068 CHORDC1Q9UHD1 332 aaPredicted RBP16.72■□□□□ 0.27
CNOT9-208ENST00000542068 ZBTB21Q9ULJ3 1066 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 SNED1Q8TER0 1413 aa16.72■□□□□ 0.27
CNOT9-208ENST00000542068 CASZ1Q86V15 1759 aa16.71■□□□□ 0.27
CNOT9-208ENST00000542068 CLSTN1O94985 981 aa16.71■□□□□ 0.27
CNOT9-208ENST00000542068 APBA3O96018 575 aa16.71■□□□□ 0.27
CNOT9-208ENST00000542068 GH2P01242 217 aa16.71■□□□□ 0.27
CNOT9-208ENST00000542068 FXR2P51116 673 aaKnown RBP eCLIP16.71■□□□□ 0.27
CNOT9-208ENST00000542068 PSMC6P62333 389 aa16.71■□□□□ 0.27
CNOT9-208ENST00000542068 IRS2Q9Y4H2 1338 aa16.71■□□□□ 0.27
CNOT9-208ENST00000542068 ARAP2Q8WZ64 1704 aa16.71■□□□□ 0.27
CNOT9-208ENST00000542068 POLRMTO00411 1230 aaKnown RBP16.71■□□□□ 0.27
CNOT9-208ENST00000542068 RDXP35241 583 aaKnown RBP16.71■□□□□ 0.27
CNOT9-208ENST00000542068 MAP2K2P36507 400 aa16.71■□□□□ 0.27
CNOT9-208ENST00000542068 CPLX4Q7Z7G2 160 aa16.71■□□□□ 0.27
CNOT9-208ENST00000542068 CCDC13Q8IYE1 715 aa16.71■□□□□ 0.27
CNOT9-208ENST00000542068 CNOT8Q9UFF9 292 aaKnown RBP16.71■□□□□ 0.27
CNOT9-208ENST00000542068 TMEM110-MUSTN1A8MSY1 372 aa16.71■□□□□ 0.26
CNOT9-208ENST00000542068 USP8P40818 1118 aa16.71■□□□□ 0.26
CNOT9-208ENST00000542068 CASP4P49662 377 aa16.71■□□□□ 0.26
CNOT9-208ENST00000542068 CDR1P51861 262 aa16.71■□□□□ 0.26
CNOT9-208ENST00000542068 ZNF844Q08AG5 666 aa16.71■□□□□ 0.26
CNOT9-208ENST00000542068 E2F5Q15329 346 aa16.71■□□□□ 0.26
CNOT9-208ENST00000542068 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.26
CNOT9-208ENST00000542068 TPH2Q8IWU9 490 aa16.71■□□□□ 0.26
CNOT9-208ENST00000542068 SELENOSQ9BQE4 189 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms