RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 FAM184AQ8NB25 1140 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 ATP8B4Q8TF62 1192 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 DNAJB3Q8WWF6 145 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 FAM20AQ96MK3 541 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 MTMR9Q96QG7 549 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 TEKT3Q9BXF9 490 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 TMEM60Q9H2L4 133 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 FOXP1Q9H334 677 aaPredicted RBP10.99□□□□□ -0.65
YBX3-212ENST00000542002 BRMS1Q9HCU9 246 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 TRPC6Q9Y210 931 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 SAMM50Q9Y512 469 aa10.99□□□□□ -0.65
YBX3-212ENST00000542002 TMEM150BA6NC51 233 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 RRN3P2A6NIE6 340 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 WDR64B1ANS9 1081 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 HBP1O60381 514 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 CTSHP09668 335 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 GCFC2P16383 781 aaKnown RBP10.98□□□□□ -0.65
YBX3-212ENST00000542002 U2AF2P26368 475 aaKnown RBP eCLIP10.98□□□□□ -0.653e-8■■□□□ 14.4
YBX3-212ENST00000542002 KLRC1P26715 233 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 RFC2P35250 354 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 PBX2P40425 430 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 SLC26A2P50443 739 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 MGAT3Q09327 533 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 PPP2R5CQ13362 524 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 CUL4AQ13619 759 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 NBR1Q14596 966 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 FAM26DQ5JW98 314 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 FAM160B1Q5W0V3 765 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 PSRC1Q6PGN9 363 aaPredicted RBP10.98□□□□□ -0.65
YBX3-212ENST00000542002 MTHFD1LQ6UB35 978 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 MIER3Q7Z3K6 550 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 RPAINQ86UA6 219 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 C4orf32Q8N8J7 132 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 CEP89Q96ST8 783 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 FTOQ9C0B1 505 aaKnown RBP eCLIP10.98□□□□□ -0.65
YBX3-212ENST00000542002 WRAP73Q9P2S5 460 aaPredicted RBP10.98□□□□□ -0.65
YBX3-212ENST00000542002 TUBE1Q9UJT0 475 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 PCDHA2Q9Y5H9 948 aa10.98□□□□□ -0.65
YBX3-212ENST00000542002 ZBTB39O15060 712 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 TBX3O15119 743 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 SFNP31947 248 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 MCM7P33993 719 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 JAK3P52333 1124 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 RABGGTBP53611 331 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 TMEM62Q0P6H9 643 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 SAFBQ15424 915 aaKnown RBP eCLIP10.97□□□□□ -0.65
YBX3-212ENST00000542002 ZNF174Q15697 407 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 TMCO2Q7Z6W1 182 aaPredicted RBP10.97□□□□□ -0.65
YBX3-212ENST00000542002 NOSTRINQ8IVI9 506 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 CKAP2LQ8IYA6 745 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 KIAA0319LQ8IZA0 1049 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 ZNF579Q8NAF0 562 aaKnown RBP10.97□□□□□ -0.65
YBX3-212ENST00000542002 BANK1Q8NDB2 785 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 BBXQ8WY36 941 aaPredicted RBP10.97□□□□□ -0.65
YBX3-212ENST00000542002 SH2D3AQ9BRG2 576 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 FAM49AQ9H0Q0 323 aaPredicted RBP10.97□□□□□ -0.65
YBX3-212ENST00000542002 CDHR5Q9HBB8 845 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 RGL1Q9NZL6 768 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 IGSF9BQ9UPX0 1349 aa10.97□□□□□ -0.65
YBX3-212ENST00000542002 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.96□□□□□ -0.65
YBX3-212ENST00000542002 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.96□□□□□ -0.65
YBX3-212ENST00000542002 SLITRK3O94933 977 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 C22orf31O95567 290 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 PFKMP08237 780 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 MYOGP15173 224 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 SMAD3P84022 425 aaKnown RBP10.96□□□□□ -0.65
YBX3-212ENST00000542002 PRKCEQ02156 737 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 MKRN4PQ13434 485 aaPredicted RBP10.96□□□□□ -0.65
YBX3-212ENST00000542002 TARBP2Q15633 366 aaKnown RBP10.96□□□□□ -0.65
YBX3-212ENST00000542002 CALCRLQ16602 461 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 PLEKHG4Q58EX7 1191 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 ZNF484Q5JVG2 852 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 TAF2Q6P1X5 1199 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 ANO5Q75V66 913 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 DBF4BQ8NFT6 615 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 RDM1Q8NG50 284 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 NAP1L4Q99733 375 aaKnown RBP10.96□□□□□ -0.65
YBX3-212ENST00000542002 NIFKQ9BYG3 293 aaKnown RBP10.96□□□□□ -0.65
YBX3-212ENST00000542002 PBX4Q9BYU1 374 aa10.96□□□□□ -0.65
YBX3-212ENST00000542002 TTYH1Q9H313 450 aaPredicted RBP10.96□□□□□ -0.65
YBX3-212ENST00000542002 CDH23Q9H251 3354 aa10.96□□□□□ -0.66
YBX3-212ENST00000542002 A0A087WWV3 80 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 SMIM35A0A1B0GVV1 85 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 ZBBXA8MT70 800 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 NEMFO60524 1076 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 CAND2O75155 1236 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 OATP04181 439 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 TXKP42681 527 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 DEFB103AP81534 67 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 DRP2Q13474 957 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 LPIN1Q14693 890 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 EPHA7Q15375 998 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 GPR153Q6NV75 609 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.95□□□□□ -0.662e-7■■■■□ 25
YBX3-212ENST00000542002 SLFN12Q8IYM2 578 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 LINC01465Q8N7H1 131 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 DYDC2Q96IM9 177 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 HSD17B14Q9BPX1 270 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms