RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 IBSPP21815 317 aaPredicted RBP9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 HSD17B4P51659 736 aa9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 GHRHRQ02643 423 aa9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 STK3Q13188 491 aa9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 COL19A1Q14993 1142 aa9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 CTC1Q2NKJ3 1217 aa9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 TRIM67Q6ZTA4 783 aa9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 TEX2Q8IWB9 1127 aa9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 IL31RAQ8NI17 732 aa9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 GTF3C6Q969F1 213 aa9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 BCAS3Q9H6U6 928 aa9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 MAP3K20Q9NYL2 800 aaKnown RBP9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 PCDHA1Q9Y5I3 950 aa9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 V9GY48 417 aaPredicted RBP9.94□□□□□ -0.82
CLSTN3-212ENST00000541770 C5orf67F2Z3F1 127 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 OPLAHO14841 1288 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 CAND2O75155 1236 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 LARGE1O95461 756 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 AKAP17AQ02040 695 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 SSRP1Q08945 709 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 PFKFB3Q16875 520 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 CYFIP1Q7L576 1253 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 RBM23Q86U06 439 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 VSIG10LQ86VR7 867 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 TRIM50Q86XT4 487 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 TRIM22Q8IYM9 498 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 PIBF1Q8WXW3 757 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 PPP2R3CQ969Q6 453 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 RTEL1Q9NZ71 1219 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 ZNF215Q9UL58 517 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 ZNF318Q5VUA4 2279 aa9.93□□□□□ -0.82
CLSTN3-212ENST00000541770 STK36Q9NRP7 1315 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 GCOM1H8Y6P7 765 aaPredicted RBP9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 GFRA3O60609 400 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 PPFIA3O75145 1194 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 DEXIO95424 95 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 MMP1P03956 469 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 POLR2MP0CAP2 368 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 TGFB3P10600 412 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 SCG2P13521 617 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 ZXDAP98168 799 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 ADAM15Q13444 863 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 PKN1Q16512 942 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 GNPTABQ3T906 1256 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 PAN2Q504Q3 1202 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 WWC2Q6AWC2 1192 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 PPP1R18Q6NYC8 613 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 BMP8AQ7Z5Y6 402 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 ADGRD2Q7Z7M1 963 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 FAM177A1Q8N128 213 aaPredicted RBP9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 FBXL6Q8N531 539 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 NECAB1Q8N987 351 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 LMBR1Q8WVP7 490 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 ATOH1Q92858 354 aaPredicted RBP9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 PHKBQ93100 1093 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 RPGRIP1Q96KN7 1286 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 PRRX2Q99811 253 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 SLC26A6Q9BXS9 759 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 BARHL2Q9NY43 387 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 MYO7AQ13402 2215 aa9.92□□□□□ -0.82
CLSTN3-212ENST00000541770 TECTAO75443 2155 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 hCG_1642624A0A1W2PR95 340 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 PIK3CDO00329 1044 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 ENPP3O14638 875 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 CD2BP2O95400 341 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 CTDNEP1O95476 244 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 CHRNA1P02708 482 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 LINC00271P0C7V0 271 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 HOXC8P31273 242 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 NRIP1P48552 1158 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 ST3GAL1Q11201 340 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 TCF15Q12870 199 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 NEDD9Q14511 834 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 FAM26DQ5JW98 314 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 RUFY4Q6ZNE9 571 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 HEATR3Q7Z4Q2 680 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 RSPH3Q86UC2 560 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 NSUN7Q8NE18 718 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 MICAL1Q8TDZ2 1067 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 CCDC12Q8WUD4 166 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 GPR20Q99678 358 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 LLPHQ9BRT6 129 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 GLT8D2Q9H1C3 349 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 SH3GLB2Q9NR46 395 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 BARX2Q9UMQ3 279 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 PLAGL2Q9UPG8 496 aa9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 MRPL42Q9Y6G3 142 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-212ENST00000541770 ESYT2A0FGR8 921 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 DGKIO75912 1065 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 DNAJB1P25685 340 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 MARK3P27448 753 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 NAPAP54920 295 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 VCPP55072 806 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 IGBP1P78318 339 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 LPIN1Q14693 890 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 SPOUT1Q5T280 376 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 TYW1BQ6NUM6 668 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 METTL7BQ6UX53 244 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 ZBTB33Q86T24 672 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 CCDC83Q8IWF9 413 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms