RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SV2BQ7L1I2 683 aa31.01■■■□□ 2.55
CCM2-218ENST00000541586 DHX40Q8IX18 779 aaKnown RBP31.01■■■□□ 2.55
CCM2-218ENST00000541586 GIMAP8Q8ND71 665 aaPredicted RBP31.01■■■□□ 2.55
CCM2-218ENST00000541586 PAK6Q9NQU5 681 aaPredicted RBP31.01■■■□□ 2.55
CCM2-218ENST00000541586 TBC1D22BQ9NU19 505 aa31.01■■■□□ 2.55
CCM2-218ENST00000541586 CHMP2AO43633 222 aa31■■■□□ 2.55
CCM2-218ENST00000541586 RPN1P04843 607 aaKnown RBP31■■■□□ 2.55
CCM2-218ENST00000541586 SPATA31C1P0DKV0 1188 aa31■■■□□ 2.55
CCM2-218ENST00000541586 SPATA33Q96N06 139 aa31■■■□□ 2.55
CCM2-218ENST00000541586 EIF2AK1Q9BQI3 630 aaKnown RBP31■■■□□ 2.55
CCM2-218ENST00000541586 UNC45AQ9H3U1 944 aa31■■■□□ 2.55
CCM2-218ENST00000541586 DHX15O43143 795 aaKnown RBP30.99■■■□□ 2.55
CCM2-218ENST00000541586 C6orf222P0C671 652 aaPredicted RBP30.99■■■□□ 2.55
CCM2-218ENST00000541586 AMPD3Q01432 767 aa30.99■■■□□ 2.55
CCM2-218ENST00000541586 ARHGAP1Q07960 439 aa30.99■■■□□ 2.55
CCM2-218ENST00000541586 LAMC2Q13753 1193 aa30.99■■■□□ 2.55
CCM2-218ENST00000541586 DHX8Q14562 1220 aaKnown RBP30.99■■■□□ 2.55
CCM2-218ENST00000541586 C7orf25Q9BPX7 421 aa30.99■■■□□ 2.55
CCM2-218ENST00000541586 TRIM9Q9C026 710 aa30.99■■■□□ 2.55
CCM2-218ENST00000541586 SPC25Q9HBM1 224 aa30.99■■■□□ 2.55
CCM2-218ENST00000541586 TELO2Q9Y4R8 837 aa30.99■■■□□ 2.55
CCM2-218ENST00000541586 FARP2O94887 1054 aaPredicted RBP30.98■■■□□ 2.55
CCM2-218ENST00000541586 METTL7BQ6UX53 244 aa30.98■■■□□ 2.55
CCM2-218ENST00000541586 AOPEPQ8N6M6 819 aa30.98■■■□□ 2.55
CCM2-218ENST00000541586 MLKLQ8NB16 471 aa30.98■■■□□ 2.55
CCM2-218ENST00000541586 ANP32BQ92688 251 aaKnown RBP30.98■■■□□ 2.55
CCM2-218ENST00000541586 POLR3CQ9BUI4 534 aaPredicted RBP30.98■■■□□ 2.55
CCM2-218ENST00000541586 JPH1Q9HDC5 661 aaPredicted RBP30.98■■■□□ 2.55
CCM2-218ENST00000541586 POTEFA5A3E0 1075 aa30.98■■■□□ 2.55
CCM2-218ENST00000541586 BEX3Q00994 111 aa30.98■■■□□ 2.55
CCM2-218ENST00000541586 HSDL1Q3SXM5 330 aa30.98■■■□□ 2.55
CCM2-218ENST00000541586 POTEGQ6S5H5 508 aa30.98■■■□□ 2.55
CCM2-218ENST00000541586 AFG1LQ8WV93 481 aa30.98■■■□□ 2.55
CCM2-218ENST00000541586 TMEM106CQ9BVX2 250 aa30.98■■■□□ 2.55
CCM2-218ENST00000541586 SLC9A2Q9UBY0 812 aa30.98■■■□□ 2.55
CCM2-218ENST00000541586 Q9Y3F1 56 aa30.98■■■□□ 2.55
CCM2-218ENST00000541586 NFASCO94856 1347 aa30.97■■■□□ 2.55
CCM2-218ENST00000541586 BECN2A8MW95 431 aa30.97■■■□□ 2.55
CCM2-218ENST00000541586 NOP56O00567 594 aaKnown RBP30.97■■■□□ 2.55
CCM2-218ENST00000541586 HSD17B14Q9BPX1 270 aa30.97■■■□□ 2.55
CCM2-218ENST00000541586 RMND1Q9NWS8 449 aa30.97■■■□□ 2.55
CCM2-218ENST00000541586 TCEAL9Q9UHQ7 104 aa30.97■■■□□ 2.55
CCM2-218ENST00000541586 SYNRGQ9UMZ2 1314 aa30.97■■■□□ 2.55
CCM2-218ENST00000541586 E9PMD0 336 aa30.96■■■□□ 2.55
CCM2-218ENST00000541586 KLRC4O43908 158 aa30.96■■■□□ 2.55
CCM2-218ENST00000541586 CYP4A11Q02928 519 aa30.96■■■□□ 2.55
CCM2-218ENST00000541586 RGL1Q9NZL6 768 aa30.96■■■□□ 2.55
CCM2-218ENST00000541586 DOCK5Q9H7D0 1870 aa30.96■■■□□ 2.55
CCM2-218ENST00000541586 GNASQ5JWF2 1037 aa30.95■■■□□ 2.55
CCM2-218ENST00000541586 MYADML2A6NDP7 307 aa30.95■■■□□ 2.54
CCM2-218ENST00000541586 MYMKA6NI61 221 aa30.95■■■□□ 2.54
CCM2-218ENST00000541586 GOLGA6L19H0YKK7 550 aa30.95■■■□□ 2.54
CCM2-218ENST00000541586 TFRCP02786 760 aaKnown RBP30.95■■■□□ 2.54
CCM2-218ENST00000541586 GJA9P57773 515 aa30.95■■■□□ 2.54
CCM2-218ENST00000541586 TUFT1Q9NNX1 390 aa30.95■■■□□ 2.54
CCM2-218ENST00000541586 DACH1Q9UI36 760 aa30.95■■■□□ 2.54
CCM2-218ENST00000541586 SAMM50Q9Y512 469 aa30.95■■■□□ 2.54
CCM2-218ENST00000541586 GJB1P08034 283 aa30.94■■■□□ 2.54
CCM2-218ENST00000541586 ASIC1P78348 528 aa30.94■■■□□ 2.54
CCM2-218ENST00000541586 KCNB1Q14721 858 aa30.94■■■□□ 2.54
CCM2-218ENST00000541586 EPHA7Q15375 998 aa30.94■■■□□ 2.54
CCM2-218ENST00000541586 U2AF1L4Q8WU68 220 aaKnown RBP30.94■■■□□ 2.54
CCM2-218ENST00000541586 EMID1Q96A84 441 aaPredicted RBP30.94■■■□□ 2.54
CCM2-218ENST00000541586 DYDC2Q96IM9 177 aa30.94■■■□□ 2.54
CCM2-218ENST00000541586 SLITRK3O94933 977 aa30.93■■■□□ 2.54
CCM2-218ENST00000541586 SGPL1O95470 568 aa30.93■■■□□ 2.54
CCM2-218ENST00000541586 PLA2G4BP0C869 781 aa30.93■■■□□ 2.54
CCM2-218ENST00000541586 FSCN1Q16658 493 aaKnown RBP30.93■■■□□ 2.54
CCM2-218ENST00000541586 KMT5BQ4FZB7 885 aa30.93■■■□□ 2.54
CCM2-218ENST00000541586 LRRC27Q9C0I9 530 aa30.93■■■□□ 2.54
CCM2-218ENST00000541586 ADAMTS4O75173 837 aa30.93■■■□□ 2.54
CCM2-218ENST00000541586 CCNE2O96020 404 aa30.93■■■□□ 2.54
CCM2-218ENST00000541586 PSMC6P62333 389 aa30.93■■■□□ 2.54
CCM2-218ENST00000541586 RNF180Q86T96 592 aa30.93■■■□□ 2.54
CCM2-218ENST00000541586 SMYD4Q8IYR2 804 aaPredicted RBP30.93■■■□□ 2.54
CCM2-218ENST00000541586 PPTC7Q8NI37 304 aa30.93■■■□□ 2.54
CCM2-218ENST00000541586 DNM3Q9UQ16 869 aa30.93■■■□□ 2.54
CCM2-218ENST00000541586 CPT1AP50416 773 aa30.92■■■□□ 2.54
CCM2-218ENST00000541586 ACTR2P61160 394 aa30.92■■■□□ 2.54
CCM2-218ENST00000541586 KRT76Q01546 638 aa30.92■■■□□ 2.54
CCM2-218ENST00000541586 CTTNQ14247 550 aaKnown RBP30.92■■■□□ 2.54
CCM2-218ENST00000541586 BRDTQ58F21 947 aaPredicted RBP30.92■■■□□ 2.54
CCM2-218ENST00000541586 ZNF658Q5TYW1 1059 aaPredicted RBP30.92■■■□□ 2.54
CCM2-218ENST00000541586 SEPT1Q8WYJ6 367 aa30.92■■■□□ 2.54
CCM2-218ENST00000541586 GPR20Q99678 358 aa30.92■■■□□ 2.54
CCM2-218ENST00000541586 IKBKBO14920 756 aa30.91■■■□□ 2.54
CCM2-218ENST00000541586 AP5Z1O43299 807 aa30.91■■■□□ 2.54
CCM2-218ENST00000541586 RHOBTB3O94955 611 aa30.91■■■□□ 2.54
CCM2-218ENST00000541586 SSBP05455 408 aaKnown RBP eCLIP30.91■■■□□ 2.54
CCM2-218ENST00000541586 NCAPHQ15003 741 aa30.91■■■□□ 2.54
CCM2-218ENST00000541586 LRRC41Q15345 812 aa30.91■■■□□ 2.54
CCM2-218ENST00000541586 CNNM4Q6P4Q7 775 aa30.91■■■□□ 2.54
CCM2-218ENST00000541586 MIER3Q7Z3K6 550 aa30.91■■■□□ 2.54
CCM2-218ENST00000541586 TPH2Q8IWU9 490 aa30.91■■■□□ 2.54
CCM2-218ENST00000541586 KCTD17Q8N5Z5 321 aa30.91■■■□□ 2.54
CCM2-218ENST00000541586 UPF3AQ9H1J1 476 aaKnown RBP30.91■■■□□ 2.54
CCM2-218ENST00000541586 A6NJR5 290 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 SMTNL1A8MU46 457 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 MMP3P08254 477 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 CD44P16070 742 aaKnown RBP30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms