RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 CASP5P51878 434 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 CACNB3P54284 484 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 ARL4CP56559 192 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 INSM1Q01101 510 aaPredicted RBP6.36□□□□□ -1.39
DDB1-219ENST00000541513 SUZ12Q15022 739 aaKnown RBP6.36□□□□□ -1.39
DDB1-219ENST00000541513 LLGL1Q15334 1064 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 CCNG2Q16589 344 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 ITPRIPL1Q6GPH6 555 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 STYK1Q6J9G0 422 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 ZNF598Q86UK7 904 aaKnown RBP6.36□□□□□ -1.39
DDB1-219ENST00000541513 TRIM59Q8IWR1 403 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 CHTF18Q8WVB6 975 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 KCTD13Q8WZ19 329 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 KIAA1191Q96A73 305 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 TRIM44Q96DX7 344 aaPredicted RBP6.36□□□□□ -1.39
DDB1-219ENST00000541513 C1GALT1C1Q96EU7 318 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 PPP1R16BQ96T49 567 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 CHCHD6Q9BRQ6 235 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 FAM167BQ9BTA0 163 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 TRIT1Q9H3H1 467 aaKnown RBP6.36□□□□□ -1.39
DDB1-219ENST00000541513 CXorf56Q9H5V9 222 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 BRD7Q9NPI1 651 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 CYP26B1Q9NR63 512 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 TLR7Q9NYK1 1049 aaKnown RBP6.36□□□□□ -1.39
DDB1-219ENST00000541513 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.36□□□□□ -1.39
DDB1-219ENST00000541513 CDC23Q9UJX2 597 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 ADAM30Q9UKF2 790 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 SH3BP1Q9Y3L3 701 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 ROBO1Q9Y6N7 1651 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 NHSL1Q5SYE7 1610 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 ATP7BP35670 1465 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 C1orf167Q5SNV9 1468 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 FAM86C2PA6NEL3 165 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 FAM187AA6NFU0 413 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 INMTO95050 263 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 VEGFAP15692 232 aaPredicted RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 RAG1P15918 1043 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 ATP2A2P16615 1042 aaKnown RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 PLCG1P19174 1290 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 TNFSF4P23510 183 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 PEX2P28328 305 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 GPR3P46089 330 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 RNF144AP50876 292 aaPredicted RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 KPNA1P52294 538 aaPredicted RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 NAP1L1P55209 391 aaKnown RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 GFRA1P56159 465 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 PDE4BQ07343 736 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 CACNB2Q08289 660 aaPredicted RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 CCINQ13939 588 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 DCTN1Q14203 1278 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 SLC45A4Q5BKX6 768 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 WIPI1Q5MNZ9 446 aaPredicted RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 SAMD5Q5TGI4 173 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 LIAT1Q6ZQX7 453 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 DENND1CQ8IV53 801 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 BRSK2Q8IWQ3 736 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 VWA5B2Q8N398 1253 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 CRACR2BQ8N4Y2 399 aaPredicted RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 ARL6IP6Q8N6S5 226 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 ASAP3Q8TDY4 903 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 TESK2Q96S53 571 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 MAP3K14Q99558 947 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 MRPL9Q9BYD2 267 aaKnown RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 ELAC1Q9H777 363 aaKnown RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 CERS4Q9HA82 394 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 ZCCHC17Q9NP64 241 aaKnown RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 CABP5Q9NP86 173 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 THG1LQ9NWX6 298 aaKnown RBP6.35□□□□□ -1.39
DDB1-219ENST00000541513 GIMAP2Q9UG22 337 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 SLC13A4Q9UKG4 626 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 EMC9Q9Y3B6 208 aa6.35□□□□□ -1.39
DDB1-219ENST00000541513 AKAP12Q02952 1782 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 EVC2Q86UK5 1308 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 ST20-MTHFSA0A0A6YYL1 179 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 BLACEA4D250 179 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 SMTNL1A8MU46 457 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 EIF3FO00303 357 aaPredicted RBP6.34□□□□□ -1.39
DDB1-219ENST00000541513 ADAMTS3O15072 1205 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 B3GALT2O43825 422 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 PSAPP07602 524 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 MYBP10242 640 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 RARAP10276 462 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 TARSP26639 723 aaKnown RBP6.34□□□□□ -1.39
DDB1-219ENST00000541513 PIK3CBP42338 1070 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 MECP2P51608 486 aaKnown RBP6.34□□□□□ -1.39
DDB1-219ENST00000541513 ATXN1P54253 815 aaKnown RBP6.34□□□□□ -1.39
DDB1-219ENST00000541513 PLIN5Q00G26 463 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 PCDH1Q08174 1060 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 PSMD6Q15008 389 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 DDB1Q16531 1140 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 WDR44Q5JSH3 913 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 SLC27A3Q5K4L6 730 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 RNF220Q5VTB9 566 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 CREB3L3Q68CJ9 461 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 TMTC1Q8IUR5 882 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 CACNA2D3Q8IZS8 1091 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 TEX9Q8N6V9 391 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 PPP1R35Q8TAP8 253 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 LMBR1Q8WVP7 490 aa6.34□□□□□ -1.39
DDB1-219ENST00000541513 ANP32BQ92688 251 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms