RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 SEC23AQ15436 765 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 TM4SF20Q53R12 229 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 FIGNQ5HY92 759 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 ZNF585AQ6P3V2 769 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 PKN3Q6P5Z2 889 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 BRAPQ7Z569 592 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 SCLYQ96I15 445 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 MAGEB10Q96LZ2 347 aaPredicted RBP5.96□□□□□ -1.46
PRKDC-210ENST00000541488 LRRC37BQ96QE4 947 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 OSBPL2Q9H1P3 480 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 UCKL1Q9NWZ5 548 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 ADAM29Q9UKF5 820 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 WNT9AO14904 365 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 GSTA4O15217 222 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 GPR42O15529 346 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 C4BPAP04003 597 aaKnown RBP5.95□□□□□ -1.46
PRKDC-210ENST00000541488 MMEP08473 750 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 NAT1P18440 290 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 CSF2RBP32927 897 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 SURF1Q15526 300 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 LONRF2Q1L5Z9 754 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 WDR72Q3MJ13 1102 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 LRP10Q7Z4F1 713 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 ZSWIM2Q8NEG5 633 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 THAP3Q8WTV1 239 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-210ENST00000541488 GNRHR2Q96P88 292 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 ZNF747Q9BV97 191 aa5.95□□□□□ -1.46
PRKDC-210ENST00000541488 ING1Q9UK53 422 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-210ENST00000541488 KRT37O76014 449 aa5.94□□□□□ -1.46
PRKDC-210ENST00000541488 RAPGEF3O95398 923 aa5.94□□□□□ -1.46
PRKDC-210ENST00000541488 APPP05067 770 aa5.94□□□□□ -1.46
PRKDC-210ENST00000541488 PTGS1P23219 599 aa5.94□□□□□ -1.46
PRKDC-210ENST00000541488 HNRNPA0Q13151 305 aaKnown RBP5.94□□□□□ -1.46
PRKDC-210ENST00000541488 ABHD17CQ6PCB6 329 aa5.94□□□□□ -1.46
PRKDC-210ENST00000541488 LRSAM1Q6UWE0 723 aa5.94□□□□□ -1.46
PRKDC-210ENST00000541488 CIR1Q86X95 450 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-210ENST00000541488 PALM2Q8IXS6 379 aa5.94□□□□□ -1.46
PRKDC-210ENST00000541488 IGSF22Q8N9C0 903 aa5.94□□□□□ -1.46
PRKDC-210ENST00000541488 GSTCDQ8NEC7 633 aa5.94□□□□□ -1.46
PRKDC-210ENST00000541488 ERCC4Q92889 916 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-210ENST00000541488 PDGFDQ9GZP0 370 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-210ENST00000541488 VPS11Q9H270 941 aa5.94□□□□□ -1.46
PRKDC-210ENST00000541488 CDC42EP3Q9UKI2 254 aa5.94□□□□□ -1.46
PRKDC-210ENST00000541488 CDK11AQ9UQ88 783 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-210ENST00000541488 EFCAB14O75071 495 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 CNOT4O95628 575 aaKnown RBP5.93□□□□□ -1.46
PRKDC-210ENST00000541488 GJA4P35212 333 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 KCNQ1P51787 676 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 EPHB4P54760 987 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 IL13RA1P78552 427 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 TMEM132BQ14DG7 1078 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 CDSNQ15517 529 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 C2orf27AQ580R0 203 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 SOGA3Q5TF21 947 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 IFNL2Q8IZJ0 200 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 SREK1Q8WXA9 508 aaKnown RBP5.93□□□□□ -1.46
PRKDC-210ENST00000541488 MKL1Q969V6 931 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 MEGF9Q9H1U4 602 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 KANSL2Q9H9L4 492 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 INCENPQ9NQS7 918 aa5.93□□□□□ -1.46
PRKDC-210ENST00000541488 TCRBV16S1A1N1A0A5B0 115 aa5.92□□□□□ -1.46
PRKDC-210ENST00000541488 CLASP2O75122 1294 aaKnown RBP5.92□□□□□ -1.46
PRKDC-210ENST00000541488 AOAHP28039 575 aa5.92□□□□□ -1.46
PRKDC-210ENST00000541488 LACTBP83111 547 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-210ENST00000541488 USP10Q14694 798 aaKnown RBP5.92□□□□□ -1.46
PRKDC-210ENST00000541488 ZC3H12BQ5HYM0 836 aaKnown RBP5.92□□□□□ -1.46
PRKDC-210ENST00000541488 SLFN13Q68D06 897 aa5.92□□□□□ -1.46
PRKDC-210ENST00000541488 OVCH1Q7RTY7 1134 aa5.92□□□□□ -1.46
PRKDC-210ENST00000541488 NOSTRINQ8IVI9 506 aa5.92□□□□□ -1.46
PRKDC-210ENST00000541488 HIPK4Q8NE63 616 aa5.92□□□□□ -1.46
PRKDC-210ENST00000541488 AJUBAQ96IF1 538 aa5.92□□□□□ -1.46
PRKDC-210ENST00000541488 DEF6Q9H4E7 631 aa5.92□□□□□ -1.46
PRKDC-210ENST00000541488 NCOA5Q9HCD5 579 aaKnown RBP5.92□□□□□ -1.46
PRKDC-210ENST00000541488 BTBD7Q9P203 1132 aa5.92□□□□□ -1.46
PRKDC-210ENST00000541488 TSC22D4Q9Y3Q8 395 aa5.92□□□□□ -1.46
PRKDC-210ENST00000541488 PRAMEF22A3QJZ6 481 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 RASSF10A6NK89 507 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 CHGBP05060 677 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 KCNA6P17658 529 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 POLD1P28340 1107 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 TRIM61Q5EBN2 209 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 DPP8Q6V1X1 898 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-210ENST00000541488 OTOP2Q7RTS6 562 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 C2orf69Q8N8R5 385 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 GIMAP8Q8ND71 665 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-210ENST00000541488 CLUHP3Q96NS8 147 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 LMF1Q96S06 567 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 AMNQ9BXJ7 453 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 CARD11Q9BXL7 1154 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 CELF4Q9BZC1 486 aaKnown RBP5.91□□□□□ -1.46
PRKDC-210ENST00000541488 KIAA1683Q9H0B3 1180 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 ZSWIM4Q9H7M6 989 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 GALNT8Q9NY28 637 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 C11orf21Q9P2W6 132 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 HS3ST3A1Q9Y663 406 aa5.91□□□□□ -1.46
PRKDC-210ENST00000541488 SLC12A8A0AV02 714 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 MPIG6BO95866 241 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 CD83Q01151 205 aa5.9□□□□□ -1.46
PRKDC-210ENST00000541488 TOP3AQ13472 1001 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-210ENST00000541488 RNF151Q2KHN1 245 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms