RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 TRIP13Q15645 432 aaPredicted RBP16.44■□□□□ 0.22
HMGA2-210ENST00000541363 DPP9Q86TI2 863 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 EML4Q9HC35 981 aaKnown RBP16.44■□□□□ 0.22
HMGA2-210ENST00000541363 FANCLQ9NW38 375 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 GCNT4Q9P109 453 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 PCDHGB4Q9UN71 923 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 LAD1O00515 517 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 MAP3K15Q6ZN16 1313 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 BBS9Q3SYG4 887 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 ARHGEF25Q86VW2 580 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 NR2F2P24468 414 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 TFAMQ00059 246 aaKnown RBP16.44■□□□□ 0.22
HMGA2-210ENST00000541363 GCOM2Q9BZD3 368 aaPredicted RBP16.44■□□□□ 0.22
HMGA2-210ENST00000541363 TMEM206Q9H813 350 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 PI4K2BG5E9Z4 385 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 SURF1Q15526 300 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 E2F4Q16254 413 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 KBTBD3Q8NAB2 608 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 HEXIM2Q96MH2 286 aaKnown RBP16.44■□□□□ 0.22
HMGA2-210ENST00000541363 METTL22Q9BUU2 404 aaPredicted RBP16.44■□□□□ 0.22
HMGA2-210ENST00000541363 PAIP2BQ9ULR5 123 aaKnown RBP16.44■□□□□ 0.22
HMGA2-210ENST00000541363 SH3TC1Q8TE82 1336 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 OR6B2Q6IFH4 312 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 DSCC1Q9BVC3 393 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 KIAA1024Q9UPX6 916 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 HNRNPRO43390 633 aaKnown RBP16.43■□□□□ 0.22
HMGA2-210ENST00000541363 JAK2O60674 1132 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 DEFA1P59665 94 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 DEFA3P59666 94 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 ADNPQ9H2P0 1102 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 H0Y3Z8 333 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 INO80B-WBP1J3KQ70 363 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 NEMP1O14524 444 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 SEC31AO94979 1220 aaKnown RBP16.43■□□□□ 0.22
HMGA2-210ENST00000541363 ST13P50502 369 aaKnown RBP16.43■□□□□ 0.22
HMGA2-210ENST00000541363 PSMD7P51665 324 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 CERKLQ49MI3 558 aaPredicted RBP16.43■□□□□ 0.22
HMGA2-210ENST00000541363 LRRC8EQ6NSJ5 796 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 SH3KBP1Q96B97 665 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 TUBGCP3Q96CW5 907 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 INO80BQ9C086 356 aaPredicted RBP16.43■□□□□ 0.22
HMGA2-210ENST00000541363 ELAC2Q9BQ52 826 aaKnown RBP16.43■□□□□ 0.22
HMGA2-210ENST00000541363 FTOQ9C0B1 505 aaKnown RBP eCLIP16.43■□□□□ 0.22
HMGA2-210ENST00000541363 CCDC87Q9NVE4 849 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 SENP1Q9P0U3 644 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 ACSL3O95573 720 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 MAP4P27816 1152 aaKnown RBP16.43■□□□□ 0.22
HMGA2-210ENST00000541363 CXCR5P32302 372 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 NUP62P37198 522 aaPredicted RBP16.43■□□□□ 0.22
HMGA2-210ENST00000541363 ZNF556Q9HAH1 456 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 SLC24A3Q9HC58 644 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 UBE2TQ9NPD8 197 aaPredicted RBP16.43■□□□□ 0.22
HMGA2-210ENST00000541363 TBC1D4O60343 1298 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 AP1B1Q10567 949 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 STXBP2Q15833 593 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 SLC7A3Q8WY07 619 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 TMEM161AQ9NX61 479 aa16.43■□□□□ 0.22
HMGA2-210ENST00000541363 C4BPBP20851 252 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 TBL3Q12788 808 aaKnown RBP16.42■□□□□ 0.22
HMGA2-210ENST00000541363 LVRNQ6Q4G3 990 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 SYMPKQ92797 1274 aaKnown RBP16.42■□□□□ 0.22
HMGA2-210ENST00000541363 TRIM54Q9BYV2 358 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 TRAF3IP3Q9Y228 551 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 EXOC4Q96A65 974 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 ZNF577Q9BSK1 485 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 TSC22D4Q9Y3Q8 395 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 PODXLO00592 558 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 TOMM70O94826 608 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 ASZ1Q8WWH4 475 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 DIAPH2O60879 1101 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 SUPT3HO75486 399 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 SERPING1P05155 500 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 NR1H3Q13133 447 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 DTNBP1Q96EV8 351 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 RGL1Q9NZL6 768 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 GOLGA8MH3BSY2 632 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 TAF5LO75529 589 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 CCND2P30279 289 aa16.42■□□□□ 0.22
HMGA2-210ENST00000541363 DHTKD1Q96HY7 919 aaPredicted RBP16.42■□□□□ 0.22
HMGA2-210ENST00000541363 H2AFY2Q9P0M6 372 aaPredicted RBP16.42■□□□□ 0.22
HMGA2-210ENST00000541363 MAPRE2Q15555 327 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 ANKRD13CQ8N6S4 541 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 ZNF274Q96GC6 653 aaPredicted RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 NOS1P29475 1434 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 CTIFO43310 598 aaKnown RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 KRT38O76015 456 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 PSMA2P25787 234 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 CASP14P31944 242 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 TADA1Q96BN2 335 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 KLHL8Q9P2G9 620 aaPredicted RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 DIS3Q9Y2L1 958 aaKnown RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 COBLO75128 1261 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 THEM5Q8N1Q8 247 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 DCPSQ96C86 337 aaKnown RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 SARS2Q9NP81 518 aaKnown RBP16.41■□□□□ 0.22
HMGA2-210ENST00000541363 CMA1P23946 247 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 TRIM69Q86WT6 500 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 EGFL8Q99944 293 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 SLITRK6Q9H5Y7 841 aa16.41■□□□□ 0.22
HMGA2-210ENST00000541363 PPIP5K2O43314 1243 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms