RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 BMP2KLQ5H9B9 411 aa27.36■■□□□ 1.97
LEMD3-203ENST00000541171 POTEBQ6S5H4 581 aa27.36■■□□□ 1.97
LEMD3-203ENST00000541171 CLP1Q92989 425 aaKnown RBP27.36■■□□□ 1.97
LEMD3-203ENST00000541171 LMAN2LQ9H0V9 348 aa27.36■■□□□ 1.97
LEMD3-203ENST00000541171 PADI3Q9ULW8 664 aa27.36■■□□□ 1.97
LEMD3-203ENST00000541171 HCN4Q9Y3Q4 1203 aa27.36■■□□□ 1.97
LEMD3-203ENST00000541171 RALGAPA2Q2PPJ7 1873 aa27.36■■□□□ 1.97
LEMD3-203ENST00000541171 PAK2Q13177 524 aa27.35■■□□□ 1.97
LEMD3-203ENST00000541171 UIMC1Q96RL1 719 aa27.35■■□□□ 1.97
LEMD3-203ENST00000541171 FTHL17Q9BXU8 183 aa27.35■■□□□ 1.97
LEMD3-203ENST00000541171 CELF4Q9BZC1 486 aaKnown RBP27.35■■□□□ 1.97
LEMD3-203ENST00000541171 ALG13Q9NP73 1137 aaKnown RBP27.35■■□□□ 1.97
LEMD3-203ENST00000541171 BARHL2Q9NY43 387 aa27.35■■□□□ 1.97
LEMD3-203ENST00000541171 MEIS1O00470 390 aa27.34■■□□□ 1.97
LEMD3-203ENST00000541171 BACH1O14867 736 aa27.34■■□□□ 1.97
LEMD3-203ENST00000541171 CDC27P30260 824 aa27.34■■□□□ 1.97
LEMD3-203ENST00000541171 PAN2Q504Q3 1202 aaKnown RBP27.34■■□□□ 1.97
LEMD3-203ENST00000541171 JAKMIP3Q5VZ66 844 aa27.34■■□□□ 1.97
LEMD3-203ENST00000541171 MTHFD1LQ6UB35 978 aa27.34■■□□□ 1.97
LEMD3-203ENST00000541171 IGFLR1Q9H665 355 aa27.34■■□□□ 1.97
LEMD3-203ENST00000541171 SQORQ9Y6N5 450 aa27.34■■□□□ 1.97
LEMD3-203ENST00000541171 TTC3P53804 2025 aa27.34■■□□□ 1.97
LEMD3-203ENST00000541171 hCG_1984214I3L0E3 225 aa27.33■■□□□ 1.97
LEMD3-203ENST00000541171 SREBF1P36956 1147 aa27.33■■□□□ 1.97
LEMD3-203ENST00000541171 KRT76Q01546 638 aa27.33■■□□□ 1.97
LEMD3-203ENST00000541171 HYAL1Q12794 435 aa27.33■■□□□ 1.97
LEMD3-203ENST00000541171 AP3B2Q13367 1082 aa27.33■■□□□ 1.97
LEMD3-203ENST00000541171 COL19A1Q14993 1142 aa27.33■■□□□ 1.97
LEMD3-203ENST00000541171 CLUL1Q15846 466 aa27.33■■□□□ 1.97
LEMD3-203ENST00000541171 TMEM266Q2M3C6 531 aa27.33■■□□□ 1.97
LEMD3-203ENST00000541171 ZNF713Q8N859 430 aaPredicted RBP27.33■■□□□ 1.97
LEMD3-203ENST00000541171 FAM217BQ9NTX9 383 aaPredicted RBP27.33■■□□□ 1.97
LEMD3-203ENST00000541171 FAM50BQ9Y247 325 aa27.33■■□□□ 1.97
LEMD3-203ENST00000541171 GINS2Q9Y248 185 aa27.33■■□□□ 1.97
LEMD3-203ENST00000541171 MRPL42Q9Y6G3 142 aaKnown RBP27.33■■□□□ 1.97
LEMD3-203ENST00000541171 SMIM35A0A1B0GVV1 85 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 NCK2O43639 380 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 ATG7O95352 703 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 CCNE2O96020 404 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 KLRC1P26715 233 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 LTBRP36941 435 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 CLK2P49760 499 aaKnown RBP27.32■■□□□ 1.96
LEMD3-203ENST00000541171 FGD1P98174 961 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 NFX1Q12986 1120 aaKnown RBP27.32■■□□□ 1.96
LEMD3-203ENST00000541171 PLA2G4DQ86XP0 818 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 NPAS4Q8IUM7 802 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 TEX2Q8IWB9 1127 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 NME8Q8N427 588 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 GLT8D2Q9H1C3 349 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 IGSF9BQ9UPX0 1349 aa27.32■■□□□ 1.96
LEMD3-203ENST00000541171 STAG3L1P0CL83 205 aa27.31■■□□□ 1.96
LEMD3-203ENST00000541171 SCG2P13521 617 aa27.31■■□□□ 1.96
LEMD3-203ENST00000541171 GTF2F1P35269 517 aaKnown RBP eCLIP27.31■■□□□ 1.96
LEMD3-203ENST00000541171 ADD1P35611 737 aaKnown RBP27.31■■□□□ 1.96
LEMD3-203ENST00000541171 KRT32Q14532 448 aa27.31■■□□□ 1.96
LEMD3-203ENST00000541171 TSGA10IPQ3SY00 556 aa27.31■■□□□ 1.96
LEMD3-203ENST00000541171 FAM160B1Q5W0V3 765 aa27.31■■□□□ 1.96
LEMD3-203ENST00000541171 ABHD15Q6UXT9 468 aa27.31■■□□□ 1.96
LEMD3-203ENST00000541171 CMTR2Q8IYT2 770 aaKnown RBP27.31■■□□□ 1.96
LEMD3-203ENST00000541171 PLVAPQ9BX97 442 aa27.31■■□□□ 1.96
LEMD3-203ENST00000541171 LRFN2Q9ULH4 789 aa27.31■■□□□ 1.96
LEMD3-203ENST00000541171 PLAGL2Q9UPG8 496 aa27.31■■□□□ 1.96
LEMD3-203ENST00000541171 HBP1O60381 514 aa27.3■■□□□ 1.96
LEMD3-203ENST00000541171 CPA1P15085 419 aa27.3■■□□□ 1.96
LEMD3-203ENST00000541171 GATMP50440 423 aa27.3■■□□□ 1.96
LEMD3-203ENST00000541171 SLC26A2P50443 739 aa27.3■■□□□ 1.96
LEMD3-203ENST00000541171 DLX2Q07687 328 aaPredicted RBP27.3■■□□□ 1.96
LEMD3-203ENST00000541171 TMX1Q9H3N1 280 aa27.3■■□□□ 1.96
LEMD3-203ENST00000541171 ZNF302Q9NR11 478 aa27.3■■□□□ 1.96
LEMD3-203ENST00000541171 IGKV6D-21A0A0A0MT36 114 aa27.29■■□□□ 1.96
LEMD3-203ENST00000541171 FAM86B1E9PN63 330 aa27.29■■□□□ 1.96
LEMD3-203ENST00000541171 MMP1P03956 469 aa27.29■■□□□ 1.96
LEMD3-203ENST00000541171 FAM86B2P0C5J1 330 aa27.29■■□□□ 1.96
LEMD3-203ENST00000541171 ALADP13716 330 aa27.29■■□□□ 1.96
LEMD3-203ENST00000541171 CTC1Q2NKJ3 1217 aa27.29■■□□□ 1.96
LEMD3-203ENST00000541171 SWSAP1Q6NVH7 229 aa27.29■■□□□ 1.96
LEMD3-203ENST00000541171 PDXDC2PQ6P474 469 aa27.29■■□□□ 1.96
LEMD3-203ENST00000541171 NIPA1Q7RTP0 329 aa27.29■■□□□ 1.96
LEMD3-203ENST00000541171 CCDC60Q8IWA6 550 aaPredicted RBP27.29■■□□□ 1.96
LEMD3-203ENST00000541171 CRIPAKQ8N1N5 446 aa27.29■■□□□ 1.96
LEMD3-203ENST00000541171 ATP8B4Q8TF62 1192 aa27.29■■□□□ 1.96
LEMD3-203ENST00000541171 KDM3AQ9Y4C1 1321 aa27.28■■□□□ 1.96
LEMD3-203ENST00000541171 CDC45O75419 566 aa27.28■■□□□ 1.96
LEMD3-203ENST00000541171 METAP2P50579 478 aaKnown RBP eCLIP27.28■■□□□ 1.96
LEMD3-203ENST00000541171 ZP2Q05996 745 aa27.28■■□□□ 1.96
LEMD3-203ENST00000541171 APOBRQ0VD83 1088 aa27.28■■□□□ 1.96
LEMD3-203ENST00000541171 CAMK1Q14012 370 aa27.28■■□□□ 1.96
LEMD3-203ENST00000541171 PFKFB3Q16875 520 aaPredicted RBP27.28■■□□□ 1.96
LEMD3-203ENST00000541171 MIS18BP1Q6P0N0 1132 aa27.28■■□□□ 1.96
LEMD3-203ENST00000541171 TRMT1LQ7Z2T5 733 aaKnown RBP27.28■■□□□ 1.96
LEMD3-203ENST00000541171 P2RX5Q93086 422 aa27.28■■□□□ 1.96
LEMD3-203ENST00000541171 PPP1R16BQ96T49 567 aa27.28■■□□□ 1.96
LEMD3-203ENST00000541171 CDHR5Q9HBB8 845 aa27.28■■□□□ 1.96
LEMD3-203ENST00000541171 ADAMTS3O15072 1205 aa27.27■■□□□ 1.96
LEMD3-203ENST00000541171 LINC01565O15544 149 aa27.27■■□□□ 1.96
LEMD3-203ENST00000541171 ITGB1P05556 798 aa27.27■■□□□ 1.96
LEMD3-203ENST00000541171 HMGB1P09429 215 aaKnown RBP27.27■■□□□ 1.96
LEMD3-203ENST00000541171 DNAJB1P25685 340 aa27.27■■□□□ 1.96
LEMD3-203ENST00000541171 CENPQQ7L2Z9 268 aaPredicted RBP27.27■■□□□ 1.96
LEMD3-203ENST00000541171 CKAP2LQ8IYA6 745 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms