RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 RASSF10A6NK89 507 aa8.81□□□□□ -1
YBX3-210ENST00000540975 FOXP2O15409 715 aa8.81□□□□□ -1
YBX3-210ENST00000540975 KRT37O76014 449 aa8.81□□□□□ -1
YBX3-210ENST00000540975 POU3F2P20265 443 aaPredicted RBP8.81□□□□□ -1
YBX3-210ENST00000540975 SDHAP31040 664 aa8.81□□□□□ -1
YBX3-210ENST00000540975 MC4RP32245 332 aa8.81□□□□□ -1
YBX3-210ENST00000540975 LCE4AQ5TA78 99 aa8.81□□□□□ -1
YBX3-210ENST00000540975 CC2D1AQ6P1N0 951 aaPredicted RBP8.81□□□□□ -1
YBX3-210ENST00000540975 FAM124AQ86V42 546 aa8.81□□□□□ -1
YBX3-210ENST00000540975 NUDT10Q8NFP7 164 aa8.81□□□□□ -1
YBX3-210ENST00000540975 ASB15Q8WXK1 588 aa8.81□□□□□ -1
YBX3-210ENST00000540975 NUDT11Q96G61 164 aa8.81□□□□□ -1
YBX3-210ENST00000540975 ORAI3Q9BRQ5 295 aa8.81□□□□□ -1
YBX3-210ENST00000540975 INCENPQ9NQS7 918 aa8.81□□□□□ -1
YBX3-210ENST00000540975 RTEL1Q9NZ71 1219 aa8.81□□□□□ -1
YBX3-210ENST00000540975 DVL2O14641 736 aa8.8□□□□□ -1
YBX3-210ENST00000540975 NEK4P51957 841 aa8.8□□□□□ -1
YBX3-210ENST00000540975 PLEKHG4Q58EX7 1191 aa8.8□□□□□ -1
YBX3-210ENST00000540975 CATSPEREQ5SY80 951 aa8.8□□□□□ -1
YBX3-210ENST00000540975 CNNM4Q6P4Q7 775 aa8.8□□□□□ -1
YBX3-210ENST00000540975 DPP8Q6V1X1 898 aaPredicted RBP8.8□□□□□ -1
YBX3-210ENST00000540975 FERMT3Q86UX7 667 aa8.8□□□□□ -1
YBX3-210ENST00000540975 MBD6Q96DN6 1003 aa8.8□□□□□ -1
YBX3-210ENST00000540975 TEPSINQ96N21 525 aa8.8□□□□□ -1
YBX3-210ENST00000540975 AMNQ9BXJ7 453 aa8.8□□□□□ -1
YBX3-210ENST00000540975 UCKL1Q9NWZ5 548 aa8.8□□□□□ -1
YBX3-210ENST00000540975 PLAAQ9Y263 795 aa8.8□□□□□ -1
YBX3-210ENST00000540975 H0Y858 1186 aa8.79□□□□□ -1
YBX3-210ENST00000540975 GOLGA6L22H0YM25 854 aa8.79□□□□□ -1
YBX3-210ENST00000540975 PRICKLE3O43900 615 aaPredicted RBP8.79□□□□□ -1
YBX3-210ENST00000540975 MPIG6BO95866 241 aa8.79□□□□□ -1
YBX3-210ENST00000540975 NFATC3Q12968 1075 aa8.79□□□□□ -1
YBX3-210ENST00000540975 NFIXQ14938 502 aa8.79□□□□□ -1
YBX3-210ENST00000540975 ZDHHC9Q9Y397 364 aa8.79□□□□□ -1
YBX3-210ENST00000540975 ASB1Q9Y576 335 aa8.79□□□□□ -1
YBX3-210ENST00000540975 PRAMEF22A3QJZ6 481 aa8.78□□□□□ -1
YBX3-210ENST00000540975 IGSF3O75054 1194 aa8.78□□□□□ -1
YBX3-210ENST00000540975 KIF11P52732 1056 aa8.78□□□□□ -1
YBX3-210ENST00000540975 UBXN11Q5T124 520 aa8.78□□□□□ -1
YBX3-210ENST00000540975 Q6ZUG5 572 aa8.78□□□□□ -1
YBX3-210ENST00000540975 KIF18BQ86Y91 864 aa8.78□□□□□ -1
YBX3-210ENST00000540975 KLHL36Q8N4N3 616 aa8.78□□□□□ -1
YBX3-210ENST00000540975 RELTQ969Z4 430 aa8.78□□□□□ -1
YBX3-210ENST00000540975 TMA7Q9Y2S6 64 aaKnown RBP8.78□□□□□ -1
YBX3-210ENST00000540975 KPNA6O60684 536 aa8.77□□□□□ -1.01
YBX3-210ENST00000540975 CNR2P34972 360 aa8.77□□□□□ -1.01
YBX3-210ENST00000540975 ECE1P42892 770 aa8.77□□□□□ -1.01
YBX3-210ENST00000540975 GYS2P54840 703 aa8.77□□□□□ -1.01
YBX3-210ENST00000540975 PCBP1Q15365 356 aaKnown RBP eCLIP8.77□□□□□ -1.01
YBX3-210ENST00000540975 BORAQ6PGQ7 559 aa8.77□□□□□ -1.01
YBX3-210ENST00000540975 LRSAM1Q6UWE0 723 aa8.77□□□□□ -1.01
YBX3-210ENST00000540975 LGI4Q8N135 537 aa8.77□□□□□ -1.01
YBX3-210ENST00000540975 HIPK4Q8NE63 616 aa8.77□□□□□ -1.01
YBX3-210ENST00000540975 MFSD3Q96ES6 412 aa8.77□□□□□ -1.01
YBX3-210ENST00000540975 BTBD2Q9BX70 525 aa8.77□□□□□ -1.01
YBX3-210ENST00000540975 BARX1Q9HBU1 254 aaPredicted RBP8.77□□□□□ -1.01
YBX3-210ENST00000540975 ACSS2Q9NR19 701 aa8.77□□□□□ -1.01
YBX3-210ENST00000540975 KRTAP4-8A0A0G2JLE6 195 aa8.76□□□□□ -1.01
YBX3-210ENST00000540975 HSD3B2P26439 372 aa8.76□□□□□ -1.01
YBX3-210ENST00000540975 IL13RA1P78552 427 aa8.76□□□□□ -1.01
YBX3-210ENST00000540975 STILQ15468 1287 aa8.76□□□□□ -1.01
YBX3-210ENST00000540975 SDE2Q6IQ49 451 aa8.76□□□□□ -1.01
YBX3-210ENST00000540975 CXXC5Q7LFL8 322 aaKnown RBP8.76□□□□□ -1.01
YBX3-210ENST00000540975 FOXRED1Q96CU9 486 aaPredicted RBP8.76□□□□□ -1.01
YBX3-210ENST00000540975 AJUBAQ96IF1 538 aa8.76□□□□□ -1.01
YBX3-210ENST00000540975 TARS2Q9BW92 718 aaKnown RBP8.76□□□□□ -1.01
YBX3-210ENST00000540975 IFT57Q9NWB7 429 aa8.76□□□□□ -1.01
YBX3-210ENST00000540975 ADAM29Q9UKF5 820 aa8.76□□□□□ -1.01
YBX3-210ENST00000540975 INVSQ9Y283 1065 aa8.76□□□□□ -1.01
YBX3-210ENST00000540975 ZKSCAN5Q9Y2L8 839 aa8.76□□□□□ -1.01
YBX3-210ENST00000540975 H7C1D1 291 aa8.75□□□□□ -1.01
YBX3-210ENST00000540975 B4GALT3O60512 393 aa8.75□□□□□ -1.01
YBX3-210ENST00000540975 FOXD2O60548 495 aaPredicted RBP8.75□□□□□ -1.01
YBX3-210ENST00000540975 F2P00734 622 aa8.75□□□□□ -1.01
YBX3-210ENST00000540975 ZNF174Q15697 407 aa8.75□□□□□ -1.01
YBX3-210ENST00000540975 AHI1Q8N157 1196 aa8.75□□□□□ -1.01
YBX3-210ENST00000540975 NXPE1Q8N323 547 aa8.75□□□□□ -1.01
YBX3-210ENST00000540975 KIAA1958Q8N8K9 716 aa8.75□□□□□ -1.01
YBX3-210ENST00000540975 CXorf38Q8TB03 319 aa8.75□□□□□ -1.01
YBX3-210ENST00000540975 ERCC4Q92889 916 aaPredicted RBP8.75□□□□□ -1.01
YBX3-210ENST00000540975 KATNBL1Q9H079 304 aa8.75□□□□□ -1.01
YBX3-210ENST00000540975 B4GALT4O60513 344 aa8.74□□□□□ -1.01
YBX3-210ENST00000540975 CYP17A1P05093 508 aa8.74□□□□□ -1.01
YBX3-210ENST00000540975 ATP2A2P16615 1042 aaKnown RBP8.74□□□□□ -1.01
YBX3-210ENST00000540975 POLD1P28340 1107 aa8.74□□□□□ -1.01
YBX3-210ENST00000540975 FNTBP49356 437 aa8.74□□□□□ -1.01
YBX3-210ENST00000540975 WDR72Q3MJ13 1102 aa8.74□□□□□ -1.01
YBX3-210ENST00000540975 CREB3L3Q68CJ9 461 aa8.74□□□□□ -1.01
YBX3-210ENST00000540975 KBTBD2Q8IY47 623 aa8.74□□□□□ -1.01
YBX3-210ENST00000540975 PPM1KQ8N3J5 372 aa8.74□□□□□ -1.01
YBX3-210ENST00000540975 WDR48Q8TAF3 677 aa8.74□□□□□ -1.01
YBX3-210ENST00000540975 A0A087X0B3 334 aa8.73□□□□□ -1.01
YBX3-210ENST00000540975 SLC9A1P19634 815 aa8.73□□□□□ -1.01
YBX3-210ENST00000540975 DSG1Q02413 1049 aa8.73□□□□□ -1.01
YBX3-210ENST00000540975 TOP3AQ13472 1001 aaPredicted RBP8.73□□□□□ -1.01
YBX3-210ENST00000540975 RTN4RL1Q86UN2 441 aaPredicted RBP8.73□□□□□ -1.01
YBX3-210ENST00000540975 OR10A5Q9H207 317 aa8.73□□□□□ -1.01
YBX3-210ENST00000540975 PCIF1Q9H4Z3 704 aa8.73□□□□□ -1.01
YBX3-210ENST00000540975 OXSMQ9NWU1 459 aa8.73□□□□□ -1.01
YBX3-210ENST00000540975 ZNF891A8MT65 544 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms