RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 RPTORQ8N122 1335 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 MEIS1O00470 390 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 TBX3O15119 743 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 POLR2DO15514 142 aaKnown RBP7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 EDIL3O43854 480 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 GAS7O60861 476 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 EIF3JO75822 258 aaKnown RBP7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 ZNF202O95125 648 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 ARP10275 920 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 PFKFB1P16118 471 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 PSMC4P43686 418 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 NDUFA8P51970 172 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 FCGRTP55899 365 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 DHX9Q08211 1270 aaKnown RBP7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 MTMR1Q13613 665 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 PDIA5Q14554 519 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 IL17AQ16552 155 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 CAMK4Q16566 473 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 GNPTABQ3T906 1256 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 CCDC183Q5T5S1 534 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 LRCH2Q5VUJ6 765 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 NIPA1Q7RTP0 329 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 VSIG10LQ86VR7 867 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 PDILTQ8N807 584 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 FAM133AQ8N9E0 248 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 IL31RAQ8NI17 732 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 ERMNQ8TAM6 284 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 CD99L2Q8TCZ2 262 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 GJA10Q969M2 543 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 CCDC34Q96HJ3 373 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 EPSTI1Q96J88 318 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 CDK5RAP3Q96JB5 506 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 CDHR1Q96JP9 859 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 MBOAT7Q96N66 472 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 PYM1Q9BRP8 204 aaKnown RBP7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 ZNF577Q9BSK1 485 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 ARHGAP39Q9C0H5 1083 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 TNMDQ9H2S6 317 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 GOLPH3LQ9H4A5 285 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 KCNMB3Q9NPA1 279 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 KCNH7Q9NS40 1196 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 DDX19AQ9NUU7 478 aaKnown RBP7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 SLC5A4Q9NY91 659 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 CCDC39Q9UFE4 941 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 TCEAL9Q9UHQ7 104 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 HOOK1Q9UJC3 728 aaKnown RBP7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 COL11A1P12107 1806 aaPredicted RBP7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 A0A0G2JMZ2 1700 aa7.47□□□□□ -1.21
CLTCL1-206ENST00000540896 IGLV3-22A0A075B6J6 115 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 SLC15A5A6NIM6 579 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 ASB14A6NK59 587 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 IPO5O00410 1097 aaKnown RBP7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 TNPO2O14787 897 aaKnown RBP7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 MSH4O15457 936 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 STAM2O75886 525 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 LETM1O95202 739 aaPredicted RBP7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 ITGB5P18084 799 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 ADORA2AP29274 412 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 CTGFP29279 349 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 CDC25AP30304 524 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 ALDH5A1P51649 535 aaPredicted RBP7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 MRPS9P82933 396 aaKnown RBP7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 CAP1Q01518 475 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 ARHGEF6Q15052 776 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 KRT79Q5XKE5 535 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 NCAPH2Q6IBW4 605 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 SEPT14Q6ZU15 432 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 USP49Q70CQ1 688 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 GPR142Q7Z601 462 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 CABP7Q86V35 215 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 CEP57L1Q8IYX8 460 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 FMR1NBQ8N0W7 255 aaPredicted RBP7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 ABRAQ8N0Z2 381 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 CNNM3Q8NE01 707 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 HAS1Q92839 578 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 CALML4Q96GE6 196 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 PLIN2Q99541 437 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 ARHGAP9Q9BRR9 750 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 WDR11Q9BZH6 1224 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 NUP62CLQ9H1M0 184 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 AGO4Q9HCK5 861 aaKnown RBP7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 JADE2Q9NQC1 790 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 FKBPLQ9UIM3 349 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 GPSM3Q9Y4H4 160 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 UBIAD1Q9Y5Z9 338 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 FRMPD4Q14CM0 1322 aa7.46□□□□□ -1.22
CLTCL1-206ENST00000540896 DNAJC25-GNG10A0A024R161 153 aa7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 PP2D1A8MPX8 630 aa7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 DDX39AO00148 427 aaKnown RBP7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 CTAGE5O15320 804 aa7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 MAFGO15525 162 aa7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 CHMP2AO43633 222 aa7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 GNRH1P01148 92 aa7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 HOXD10P28358 340 aa7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 CCT6AP40227 531 aaKnown RBP7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 STAT6P42226 847 aa7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 SNW1Q13573 536 aaKnown RBP7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 RRAGBQ5VZM2 374 aa7.45□□□□□ -1.22
CLTCL1-206ENST00000540896 KANK3Q6NY19 840 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms