RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 ZNF445P59923 1031 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 PLCB4Q15147 1175 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 PLEKHH3Q7Z736 793 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 SMC1BQ8NDV3 1235 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 DPF2Q92785 391 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 ZFP91Q96JP5 570 aaPredicted RBP15.44■□□□□ 0.06
COLCA1-204ENST00000540738 XPO4Q9C0E2 1151 aaKnown RBP15.44■□□□□ 0.06
COLCA1-204ENST00000540738 MROH8Q9H579 483 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 XKR3Q5GH77 459 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 FAM83AQ86UY5 434 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 AIFM3Q96NN9 605 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 MRPL47Q9HD33 250 aaKnown RBP15.44■□□□□ 0.06
COLCA1-204ENST00000540738 MAP3K20Q9NYL2 800 aaKnown RBP15.44■□□□□ 0.06
COLCA1-204ENST00000540738 RICTORQ6R327 1708 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 UNC13DQ70J99 1090 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 NKIRAS1Q9NYS0 192 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 ARRDC4Q8NCT1 418 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 PRMT6Q96LA8 375 aaPredicted RBP15.43■□□□□ 0.06
COLCA1-204ENST00000540738 LXNQ9BS40 222 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 POLR3FQ9H1D9 316 aaPredicted RBP15.43■□□□□ 0.06
COLCA1-204ENST00000540738 STXBP3O00186 592 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 CDC25AP30304 524 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 ARL4AP40617 200 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 ZBTB16Q05516 673 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 ARL13BQ3SXY8 428 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 MUM1L1Q5H9M0 696 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 IFT20Q8IY31 132 aa15.43■□□□□ 0.06
COLCA1-204ENST00000540738 RYBPQ8N488 228 aaPredicted RBP15.43■□□□□ 0.06
COLCA1-204ENST00000540738 RASA1P20936 1047 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 MAP7D1Q3KQU3 841 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 XXYLT1Q8NBI6 393 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 NCAPGQ9BPX3 1015 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 VEPH1Q14D04 833 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 SELENOSQ9BQE4 189 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 FAM107BQ9H098 131 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 CCDC68Q9H2F9 335 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 FANCLQ9NW38 375 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 SRGAP2BP0DMP2 458 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 LONRF2Q1L5Z9 754 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 GNASQ5JWF2 1037 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 GPIHBP1Q8IV16 184 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 UBLCP1Q8WVY7 318 aaPredicted RBP15.42■□□□□ 0.06
COLCA1-204ENST00000540738 RWDD2AQ9UIY3 292 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 EIF3CLB5ME19 914 aaKnown RBP15.42■□□□□ 0.06
COLCA1-204ENST00000540738 GPC3P51654 580 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 LAMC2Q13753 1193 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 ZNF560Q96MR9 790 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 EIF3CQ99613 913 aaKnown RBP15.42■□□□□ 0.06
COLCA1-204ENST00000540738 TMEM260Q9NX78 707 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 POTEMA6NI47 508 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 SMARCA1P28370 1054 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
COLCA1-204ENST00000540738 RAB17Q9H0T7 212 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 TUFT1Q9NNX1 390 aa15.42■□□□□ 0.06
COLCA1-204ENST00000540738 DGKDQ16760 1214 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 BSPRYQ5W0U4 402 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 OR6B2Q6IFH4 312 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 DNAJC24Q6P3W2 148 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 KCNK9Q9NPC2 374 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 GCNT4Q9P109 453 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 RRN3P2A6NIE6 340 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 SMIM23A6NLE4 172 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 IFNB1P01574 187 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 MXRA7P84157 204 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 MXD4Q14582 209 aaPredicted RBP15.41■□□□□ 0.06
COLCA1-204ENST00000540738 TTBK2Q6IQ55 1244 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 CEP57Q86XR8 500 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 THAP9Q9H5L6 903 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 LMCD1Q9NZU5 365 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 PVALEFA0A1B0GWK0 134 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 CD58P19256 250 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 RAD54LQ92698 747 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 ATG4CQ96DT6 458 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 SMC6Q96SB8 1091 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 MAP3K14Q99558 947 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 CXCL11O14625 94 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 AP3M2P53677 418 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 RESTQ13127 1097 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 MAP1SQ66K74 1059 aaPredicted RBP15.41■□□□□ 0.06
COLCA1-204ENST00000540738 ANKRD13CQ8N6S4 541 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 ZKSCAN4Q969J2 545 aaPredicted RBP15.41■□□□□ 0.06
COLCA1-204ENST00000540738 EXOC4Q96A65 974 aa15.41■□□□□ 0.06
COLCA1-204ENST00000540738 PPLO60437 1756 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 PDS5AQ29RF7 1337 aaKnown RBP15.4■□□□□ 0.06
COLCA1-204ENST00000540738 KIAA0391O15091 583 aaKnown RBP15.4■□□□□ 0.06
COLCA1-204ENST00000540738 RPLP2P05387 115 aaKnown RBP15.4■□□□□ 0.06
COLCA1-204ENST00000540738 RHOXF2BP0C7M4 288 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 RFX5P48382 616 aaPredicted RBP15.4■□□□□ 0.06
COLCA1-204ENST00000540738 BACE1P56817 501 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 RNF187Q5TA31 235 aaPredicted RBP15.4■□□□□ 0.06
COLCA1-204ENST00000540738 EFCAB13Q8IY85 973 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 SMAP1Q8IYB5 467 aaPredicted RBP15.4■□□□□ 0.06
COLCA1-204ENST00000540738 RHOXF2Q9BQY4 288 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 ZNF609O15014 1411 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 DCDC2CA8MYV0 355 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 ASAP2O43150 1006 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 TOB2Q14106 344 aaPredicted RBP15.4■□□□□ 0.06
COLCA1-204ENST00000540738 TSGA10IPQ3SY00 556 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 CYFIP1Q7L576 1253 aa15.4■□□□□ 0.06
COLCA1-204ENST00000540738 UBE2TQ9NPD8 197 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms