RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 NASPP49321 788 aaPredicted RBP18.81■□□□□ 0.6
UBC-208ENST00000540700 CCL23P55773 120 aa18.81■□□□□ 0.6
UBC-208ENST00000540700 SKIV2LQ15477 1246 aaKnown RBP18.81■□□□□ 0.6
UBC-208ENST00000540700 ABHD15Q6UXT9 468 aa18.81■□□□□ 0.6
UBC-208ENST00000540700 TRIM50Q86XT4 487 aa18.81■□□□□ 0.6
UBC-208ENST00000540700 GIMAP8Q8ND71 665 aaPredicted RBP18.81■□□□□ 0.6
UBC-208ENST00000540700 PPP1R13LQ8WUF5 828 aa18.81■□□□□ 0.6
UBC-208ENST00000540700 HIPK3Q9H422 1215 aa18.81■□□□□ 0.6
UBC-208ENST00000540700 REV3LO60673 3130 aa18.81■□□□□ 0.6
UBC-208ENST00000540700 POTEMA6NI47 508 aa18.8■□□□□ 0.6
UBC-208ENST00000540700 ZNF286BP0CG31 522 aa18.8■□□□□ 0.6
UBC-208ENST00000540700 PURAQ00577 322 aaKnown RBP18.8■□□□□ 0.6
UBC-208ENST00000540700 PPP2R5CQ13362 524 aa18.8■□□□□ 0.6
UBC-208ENST00000540700 PPP2R2DQ66LE6 453 aa18.8■□□□□ 0.6
UBC-208ENST00000540700 ZNF746Q6NUN9 644 aaPredicted RBP18.8■□□□□ 0.6
UBC-208ENST00000540700 CXCL17Q6UXB2 119 aa18.8■□□□□ 0.6
UBC-208ENST00000540700 KAT2BQ92831 832 aa18.8■□□□□ 0.6
UBC-208ENST00000540700 TTC12Q9H892 705 aaPredicted RBP18.8■□□□□ 0.6
UBC-208ENST00000540700 POLR3EQ9NVU0 708 aa18.8■□□□□ 0.6
UBC-208ENST00000540700 IGKV6D-21A0A0A0MT36 114 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 CD4P01730 458 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 LGALS2P05162 132 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 MYL3P08590 195 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 BMP1P13497 986 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 MARCKSP29966 332 aaPredicted RBP18.79■□□□□ 0.6
UBC-208ENST00000540700 TCF7P36402 384 aaPredicted RBP18.79■□□□□ 0.6
UBC-208ENST00000540700 TECP42680 631 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 CPT1AP50416 773 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 KCNQ1P51787 676 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 UGCGQ16739 394 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 CCDC60Q8IWA6 550 aaPredicted RBP18.79■□□□□ 0.6
UBC-208ENST00000540700 SLFN12Q8IYM2 578 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 LINC00301Q8NCQ3 95 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 SEPT1Q8WYJ6 367 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 C16orf70Q9BSU1 422 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 C1QTNF1Q9BXJ1 281 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 CHMP5Q9NZZ3 219 aa18.79■□□□□ 0.6
UBC-208ENST00000540700 GRIN2DO15399 1336 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 PP2D1A8MPX8 630 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 ZBBXA8MT70 800 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 NOP56O00567 594 aaKnown RBP18.78■□□□□ 0.6
UBC-208ENST00000540700 MARCH6O60337 910 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 LGR5O75473 907 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 BAG4O95429 457 aaKnown RBP18.78■□□□□ 0.6
UBC-208ENST00000540700 SUPT20HL2P0C7V6 817 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 PRPHP41219 470 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 KRT76Q01546 638 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 UTP14CQ5TAP6 766 aaKnown RBP18.78■□□□□ 0.6
UBC-208ENST00000540700 NCAPH2Q6IBW4 605 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 ZNF396Q96N95 335 aaPredicted RBP18.78■□□□□ 0.6
UBC-208ENST00000540700 TRPV6Q9H1D0 765 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 DISC1Q9NRI5 854 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 WRAP73Q9P2S5 460 aaPredicted RBP18.78■□□□□ 0.6
UBC-208ENST00000540700 FBXO2Q9UK22 296 aaPredicted RBP18.78■□□□□ 0.6
UBC-208ENST00000540700 PCDHA12Q9UN75 941 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 SLC4A7Q9Y6M7 1214 aa18.78■□□□□ 0.6
UBC-208ENST00000540700 WDR64B1ANS9 1081 aa18.77■□□□□ 0.6
UBC-208ENST00000540700 LAD1O00515 517 aa18.77■□□□□ 0.6
UBC-208ENST00000540700 F2P00734 622 aa18.77■□□□□ 0.6
UBC-208ENST00000540700 ATP4AP20648 1035 aa18.77■□□□□ 0.6
UBC-208ENST00000540700 FXR2P51116 673 aaKnown RBP eCLIP18.77■□□□□ 0.61e-20■□□□□ 10.2
UBC-208ENST00000540700 PSMC6P62333 389 aa18.77■□□□□ 0.6
UBC-208ENST00000540700 ITGA7Q13683 1181 aa18.77■□□□□ 0.6
UBC-208ENST00000540700 SLC39A14Q15043 492 aa18.77■□□□□ 0.6
UBC-208ENST00000540700 DGKDQ16760 1214 aa18.77■□□□□ 0.6
UBC-208ENST00000540700 IGSF22Q8N9C0 903 aa18.77■□□□□ 0.6
UBC-208ENST00000540700 MORC2Q9Y6X9 1032 aaPredicted RBP18.77■□□□□ 0.6
UBC-208ENST00000540700 TCF20Q9UGU0 1960 aaKnown RBP18.76■□□□□ 0.59
UBC-208ENST00000540700 VWA3AA6NCI4 1184 aa18.76■□□□□ 0.59
UBC-208ENST00000540700 RFXAPO00287 272 aa18.76■□□□□ 0.59
UBC-208ENST00000540700 PPFIA4O75335 1185 aa18.76■□□□□ 0.59
UBC-208ENST00000540700 AAK1Q2M2I8 961 aa18.76■□□□□ 0.59
UBC-208ENST00000540700 MIER3Q7Z3K6 550 aa18.76■□□□□ 0.59
UBC-208ENST00000540700 SMAP1Q8IYB5 467 aaPredicted RBP18.76■□□□□ 0.59
UBC-208ENST00000540700 TNPO1Q92973 898 aaKnown RBP18.76■□□□□ 0.59
UBC-208ENST00000540700 CLIC6Q96NY7 704 aa18.76■□□□□ 0.59
UBC-208ENST00000540700 NOC4LQ9BVI4 516 aaKnown RBP18.76■□□□□ 0.59
UBC-208ENST00000540700 WNT8AQ9H1J5 351 aa18.76■□□□□ 0.59
UBC-208ENST00000540700 CERS4Q9HA82 394 aa18.76■□□□□ 0.59
UBC-208ENST00000540700 RGL1Q9NZL6 768 aa18.76■□□□□ 0.59
UBC-208ENST00000540700 PCDHA10Q9Y5I2 948 aa18.76■□□□□ 0.59
UBC-208ENST00000540700 TRANK1O15050 2925 aa18.76■□□□□ 0.59
UBC-208ENST00000540700 EMSYQ7Z589 1322 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 IGSF9BQ9UPX0 1349 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 HAS3O00219 553 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 ZNF862O60290 1169 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 YEATS4O95619 227 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 BMP15O95972 392 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 CDC25AP30304 524 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 STK38Q15208 465 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 ECM1Q16610 540 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 ARL6IP4Q66PJ3 421 aaKnown RBP18.75■□□□□ 0.59
UBC-208ENST00000540700 SWSAP1Q6NVH7 229 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 DTHD1Q6ZMT9 781 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 SLC43A3Q8NBI5 491 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 BANK1Q8NDB2 785 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 SCLYQ96I15 445 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 MMTAG2Q9BU76 263 aaKnown RBP18.75■□□□□ 0.59
UBC-208ENST00000540700 EPHX3Q9H6B9 360 aa18.75■□□□□ 0.59
UBC-208ENST00000540700 GDPD2Q9HCC8 539 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms