RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 CALML3P27482 149 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 COL9A3Q14050 684 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 LY6KQ17RY6 165 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 TSR1Q2NL82 804 aaKnown RBP10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 CWF19L1Q69YN2 538 aaKnown RBP10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 RNF207Q6ZRF8 634 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 KLHL23Q8NBE8 558 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 FLCNQ8NFG4 579 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 ESR2Q92731 530 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 BORCS6Q96GS4 357 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 TTC14Q96N46 770 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 TMEM47Q9BQJ4 181 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 SLC4A5Q9BY07 1137 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 STX8Q9UNK0 236 aa10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 ANKRD11Q6UB99 2663 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC1-202ENST00000540486 PRR5-ARHGAP8B1AHC4 643 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 SLC27A2O14975 620 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 PI15O43692 258 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 PPFIA4O75335 1185 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 DGKIO75912 1065 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 ADRB1P08588 477 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 SNAP25P60880 206 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 ARHGAP8P85298 464 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 UBE3AQ05086 875 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 LAMC2Q13753 1193 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 PDE12Q6L8Q7 609 aaKnown RBP10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 ANKRD54Q6NXT1 300 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 CYB5R4Q7L1T6 521 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 CHST3Q7LGC8 479 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 PPTC7Q8NI37 304 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 MICAL1Q8TDZ2 1067 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 ATP6V0A1Q93050 837 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 CHMP4CQ96CF2 233 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 NECTIN4Q96NY8 510 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 KRT23Q9C075 422 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 RANBP17Q9H2T7 1088 aaKnown RBP10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 ANO2Q9NQ90 1003 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 ATG2AQ2TAZ0 1938 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 FRYLO94915 3013 aa10.26□□□□□ -0.77
TRAPPC1-202ENST00000540486 ENPP3O14638 875 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 PER2O15055 1255 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 TOP1P11387 765 aaKnown RBP10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 HOXD8P13378 290 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 NPR3P17342 541 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 RPS6P62753 249 aaKnown RBP10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 LSM11P83369 360 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 KCNC3Q14003 757 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 HIC1Q14526 733 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 SEC23AQ15436 765 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 DUSP6Q16828 381 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 CREB3L3Q68CJ9 461 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 SLC30A10Q6XR72 485 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 KCTD1Q719H9 257 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 RASGRP2Q7LDG7 609 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 DGKHQ86XP1 1220 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 CMTR2Q8IYT2 770 aaKnown RBP10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 ZDHHC14Q8IZN3 488 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 DCLK2Q8N568 766 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 VN1R2Q8NFZ6 395 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 RASGRP4Q8TDF6 673 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 ZSCAN10Q96SZ4 725 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 RTKNQ9BST9 563 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 MAF1Q9H063 256 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 SH2B1Q9NRF2 756 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 R4GN57 208 aa10.25□□□□□ -0.77
TRAPPC1-202ENST00000540486 C17orf102A2RUQ5 167 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 C2CD4DB7Z1M9 353 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 RBAK-RBAKDNI3L0D1 243 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 TK2O00142 265 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 ZNF286BP0CG31 522 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 SP100P23497 879 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 HOXC8P31273 242 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 TECP42680 631 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 NT5C2P49902 561 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 ANTXR2P58335 489 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 FAM26DQ5JW98 314 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 DMRTA1Q5VZB9 504 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 SYCE2Q6PIF2 218 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 CASC1Q6TDU7 716 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 SEPT14Q6ZU15 432 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 ENAHQ8N8S7 591 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 RGS22Q8NE09 1264 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 NCOA7Q8NI08 942 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 CLEC4DQ8WXI8 215 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 OSBPL7Q9BZF2 842 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 CNNM2Q9H8M5 875 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 SENP2Q9HC62 589 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 NPDC1Q9NQX5 325 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 DDX41Q9UJV9 622 aaKnown RBP10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 RALYQ9UKM9 306 aaKnown RBP10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 MRPL42Q9Y6G3 142 aaKnown RBP10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 MYH4Q9Y623 1939 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 MYO10Q9HD67 2058 aa10.24□□□□□ -0.77
TRAPPC1-202ENST00000540486 LCTP09848 1927 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 CTSHP09668 335 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 SNHG28P0DPA3 235 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 PDHBP11177 359 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 RBM10P98175 930 aaKnown RBP10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 ITIH3Q06033 890 aa10.23□□□□□ -0.77
TRAPPC1-202ENST00000540486 STXBP2Q15833 593 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms