RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 FKBP1BP68106 108 aa18.96■□□□□ 0.63
LTBR-207ENST00000539925 LRRC41Q15345 812 aa18.96■□□□□ 0.63
LTBR-207ENST00000539925 STXBP2Q15833 593 aa18.96■□□□□ 0.63
LTBR-207ENST00000539925 NFIL3Q16649 462 aa18.96■□□□□ 0.63
LTBR-207ENST00000539925 VWA3BQ502W6 1294 aa18.96■□□□□ 0.63
LTBR-207ENST00000539925 LDLRAD1Q5T700 205 aa18.96■□□□□ 0.63
LTBR-207ENST00000539925 TMTC1Q8IUR5 882 aa18.96■□□□□ 0.63
LTBR-207ENST00000539925 TMEM139Q8IV31 216 aa18.96■□□□□ 0.63
LTBR-207ENST00000539925 ANKRD35Q8N283 1001 aa18.96■□□□□ 0.63
LTBR-207ENST00000539925 GOLGA5Q8TBA6 731 aa18.96■□□□□ 0.63
LTBR-207ENST00000539925 CCDC43Q96MW1 224 aaKnown RBP18.96■□□□□ 0.63
LTBR-207ENST00000539925 SPATC1LQ9H0A9 340 aa18.96■□□□□ 0.63
LTBR-207ENST00000539925 COL11A1P12107 1806 aaPredicted RBP18.96■□□□□ 0.63
LTBR-207ENST00000539925 EIF3JO75822 258 aaKnown RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 ICAM3P32942 547 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 ADKP55263 362 aaKnown RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 EAPPQ56P03 285 aaPredicted RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 E4F1Q66K89 784 aaPredicted RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 ZNF397Q8NF99 534 aaPredicted RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 ATP6V0A1Q93050 837 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 NDST4Q9H3R1 872 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 TYW1Q9NV66 732 aaKnown RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 LUC7L2Q9Y383 392 aaKnown RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 PAXBP1Q9Y5B6 917 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 PCDHB13Q9Y5F0 798 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 PCDHA10Q9Y5I2 948 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 A0A0G2JMZ2 1700 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 LOC102724159A0A0B4J2E5 919 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 A0A1W2PQJ5 194 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 DDX39AO00148 427 aaKnown RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 CASP14P31944 242 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 HERVK_113P62684 666 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 SNAPC2Q13487 334 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 PWP2Q15269 919 aaKnown RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 MYCT1Q8N699 235 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 BANK1Q8NDB2 785 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 MOV10L1Q9BXT6 1211 aaKnown RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 EDEM3Q9BZQ6 932 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 ASCC2Q9H1I8 757 aaPredicted RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 TBC1D7Q9P0N9 293 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 LARSQ9P2J5 1176 aaKnown RBP18.95■□□□□ 0.62
LTBR-207ENST00000539925 PNMA3Q9UL41 463 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 CAPN11Q9UMQ6 739 aa18.95■□□□□ 0.62
LTBR-207ENST00000539925 SPATA31C2B4DYI2 1134 aa18.94■□□□□ 0.62
LTBR-207ENST00000539925 TNNT1P13805 278 aa18.94■□□□□ 0.62
LTBR-207ENST00000539925 CACNB1Q02641 598 aaPredicted RBP18.94■□□□□ 0.62
LTBR-207ENST00000539925 RAD51AP2Q09MP3 1159 aa18.94■□□□□ 0.62
LTBR-207ENST00000539925 CCDC40Q4G0X9 1142 aa18.94■□□□□ 0.62
LTBR-207ENST00000539925 MIIPQ5JXC2 388 aa18.94■□□□□ 0.62
LTBR-207ENST00000539925 CYP26C1Q6V0L0 522 aa18.94■□□□□ 0.62
LTBR-207ENST00000539925 NYAP1Q6ZVC0 841 aa18.94■□□□□ 0.62
LTBR-207ENST00000539925 OTUD6AQ7L8S5 288 aa18.94■□□□□ 0.62
LTBR-207ENST00000539925 OR8K1Q8NGG5 319 aa18.94■□□□□ 0.62
LTBR-207ENST00000539925 OPTNQ96CV9 577 aa18.94■□□□□ 0.62
LTBR-207ENST00000539925 ZFP91Q96JP5 570 aaPredicted RBP18.94■□□□□ 0.62
LTBR-207ENST00000539925 METTL14Q9HCE5 456 aaKnown RBP18.94■□□□□ 0.62
LTBR-207ENST00000539925 SLC16A3O15427 465 aaKnown RBP18.93■□□□□ 0.62
LTBR-207ENST00000539925 GCNT3O95395 438 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 PSAPP07602 524 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 KRT9P35527 623 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 ADAM9Q13443 819 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 PADI6Q6TGC4 694 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 FRMD5Q7Z6J6 570 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 NELFCDQ8IXH7 590 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 FAM178BQ8IXR5 827 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 CLMNQ96JQ2 1002 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 DRC1Q96MC2 740 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 ABHD10Q9NUJ1 306 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 PKD2L1Q9P0L9 805 aa18.93■□□□□ 0.62
LTBR-207ENST00000539925 POTEB2H3BUK9 544 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 KCNA2P16389 499 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 TRIM21P19474 475 aaKnown RBP18.92■□□□□ 0.62
LTBR-207ENST00000539925 YWHABP31946 246 aaKnown RBP18.92■□□□□ 0.62
LTBR-207ENST00000539925 RARRES1P49788 294 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 MYBPC2Q14324 1141 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 GLIS3Q8NEA6 775 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 CPLX3Q8WVH0 158 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 SLC10A4Q96EP9 437 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 PPP1R13BQ96KQ4 1090 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 C16orf45Q96MC5 204 aaPredicted RBP18.92■□□□□ 0.62
LTBR-207ENST00000539925 JPH1Q9HDC5 661 aaPredicted RBP18.92■□□□□ 0.62
LTBR-207ENST00000539925 ZNHIT6Q9NWK9 470 aaKnown RBP18.92■□□□□ 0.62
LTBR-207ENST00000539925 BTBD7Q9P203 1132 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 CGNQ9P2M7 1197 aaKnown RBP18.92■□□□□ 0.62
LTBR-207ENST00000539925 WRAP73Q9P2S5 460 aaPredicted RBP18.92■□□□□ 0.62
LTBR-207ENST00000539925 KCNG1Q9UIX4 513 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 SLC45A1Q9Y2W3 748 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 R3HCC1Q9Y3T6 440 aaKnown RBP18.92■□□□□ 0.62
LTBR-207ENST00000539925 ABCD1P33897 745 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 FXR1P51114 621 aaKnown RBP eCLIP18.92■□□□□ 0.62
LTBR-207ENST00000539925 SNRPFP62306 86 aaKnown RBP18.92■□□□□ 0.62
LTBR-207ENST00000539925 ZBED6P86452 979 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 SYCP1Q15431 976 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 MIS18BP1Q6P0N0 1132 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 HS2ST1Q7LGA3 356 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 DNAJC7Q99615 494 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 SLC9A2Q9UBY0 812 aa18.92■□□□□ 0.62
LTBR-207ENST00000539925 ATP9AO75110 1047 aa18.91■□□□□ 0.62
LTBR-207ENST00000539925 CCDC175P0C221 793 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms