RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 YTHDF3Q7Z739 585 aaKnown RBP8.49□□□□□ -1.05
CCDC60-204ENST00000539847 TRIM22Q8IYM9 498 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 CCDC170Q8IYT3 715 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 SIX5Q8N196 739 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 SLC17A8Q8NDX2 589 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 OR8K1Q8NGG5 319 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 FAM76AQ8TAV0 307 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 NOC3LQ8WTT2 800 aaKnown RBP8.49□□□□□ -1.05
CCDC60-204ENST00000539847 SH3GL2Q99962 352 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 NUP58Q9BVL2 599 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 KRT23Q9C075 422 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 FAM204AQ9H8W3 233 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 USP40Q9NVE5 1235 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 RMND1Q9NWS8 449 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 CXXC1Q9P0U4 656 aaPredicted RBP8.49□□□□□ -1.05
CCDC60-204ENST00000539847 PUF60Q9UHX1 559 aaKnown RBP8.49□□□□□ -1.05
CCDC60-204ENST00000539847 SAR1BQ9Y6B6 198 aa8.49□□□□□ -1.05
CCDC60-204ENST00000539847 LRRIQ3A6PVS8 624 aaPredicted RBP8.48□□□□□ -1.05
CCDC60-204ENST00000539847 GOLGA8AA7E2F4 631 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 H3BRB1 525 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 DLL1O00548 723 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 TEX33O43247 280 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 GPAA1O43292 621 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 ICMTO60725 284 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 DKK1O94907 266 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 TFRCP02786 760 aaKnown RBP8.48□□□□□ -1.05
CCDC60-204ENST00000539847 HMGCRP04035 888 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 GYPCP04921 128 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 MYL1P05976 194 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 XBP1P17861 261 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 ADD2P35612 726 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 IRAK1P51617 712 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 GYS2P54840 703 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 GOLGA8FQ08AF8 430 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 GOLGA8DPQ0D2H9 430 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 AGERQ15109 404 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 OCLNQ16625 522 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 LRIT3Q3SXY7 679 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 GLE1Q53GS7 698 aaKnown RBP8.48□□□□□ -1.05
CCDC60-204ENST00000539847 SPTY2D1Q68D10 685 aaPredicted RBP8.48□□□□□ -1.05
CCDC60-204ENST00000539847 TAX1BP1Q86VP1 789 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 TEX2Q8IWB9 1127 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 PAGE5Q96GU1 130 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 DEFB118Q96PH6 123 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 DNAJC7Q99615 494 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 GDF15Q99988 308 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 CRACR2AQ9BSW2 395 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 DESI2Q9BSY9 194 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 TUT1Q9H6E5 874 aaKnown RBP8.48□□□□□ -1.05
CCDC60-204ENST00000539847 LY9Q9HBG7 655 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 LZTFL1Q9NQ48 299 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 ABHD10Q9NUJ1 306 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 RNF14Q9UBS8 474 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 FAM184BQ9ULE4 1060 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 GABRQQ9UN88 632 aa8.48□□□□□ -1.05
CCDC60-204ENST00000539847 FCF1Q9Y324 198 aaKnown RBP8.48□□□□□ -1.05
CCDC60-204ENST00000539847 COL2A1P02458 1487 aaPredicted RBP8.48□□□□□ -1.05
CCDC60-204ENST00000539847 ZSWIM8A7E2V4 1837 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 COL6A3P12111 3177 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 TRIM75PA6NK02 468 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 KRT86O43790 486 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 KIF1CO43896 1103 aaKnown RBP8.47□□□□□ -1.05
CCDC60-204ENST00000539847 N4BP1O75113 896 aaKnown RBP8.47□□□□□ -1.05
CCDC60-204ENST00000539847 NDUFA10O95299 355 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 CHGBP05060 677 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 EEF1GP26641 437 aaKnown RBP8.47□□□□□ -1.05
CCDC60-204ENST00000539847 CASP14P31944 242 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 PPP1R2P41236 205 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 TRAPPC10P48553 1259 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 COPB1P53618 953 aaKnown RBP8.47□□□□□ -1.05
CCDC60-204ENST00000539847 DRP2Q13474 957 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 MTF1Q14872 753 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 MEA1Q16626 185 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 FIGNQ5HY92 759 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 EMBQ6PCB8 327 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 MICALCLQ6ZW33 695 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 DIS3L2Q8IYB7 885 aaKnown RBP8.47□□□□□ -1.05
CCDC60-204ENST00000539847 TRMT44Q8IYL2 757 aaKnown RBP8.47□□□□□ -1.05
CCDC60-204ENST00000539847 MICALL1Q8N3F8 863 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 CRACR2BQ8N4Y2 399 aaPredicted RBP8.47□□□□□ -1.05
CCDC60-204ENST00000539847 CCDC155Q8N6L0 562 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 EIF1ADQ8N9N8 165 aaKnown RBP8.47□□□□□ -1.05
CCDC60-204ENST00000539847 ZNF511Q8NB15 262 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 C3orf20Q8ND61 904 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCDC60-204ENST00000539847 XAGE2Q96GT9 111 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
CCDC60-204ENST00000539847 TSGA10Q9BZW7 698 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 GINM1Q9NU53 330 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 ZNHIT6Q9NWK9 470 aaKnown RBP8.47□□□□□ -1.05
CCDC60-204ENST00000539847 CAPN11Q9UMQ6 739 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 SLC12A7Q9Y666 1083 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 RPTORQ8N122 1335 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 SYNRGQ9UMZ2 1314 aa8.47□□□□□ -1.05
CCDC60-204ENST00000539847 GPR75-ASB3A0A0A6YYF3 556 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 N4BP3O15049 544 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 RANBP6O60518 1105 aaKnown RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 ERLIN2O94905 339 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 RHOXF2BP0C7M4 288 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms