RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 AP1M1Q9BXS5 423 aa15.44■□□□□ 0.06
UBE3B-210ENST00000539599 QTRT2Q9H974 415 aaKnown RBP15.44■□□□□ 0.06
UBE3B-210ENST00000539599 WRAP73Q9P2S5 460 aaPredicted RBP15.44■□□□□ 0.06
UBE3B-210ENST00000539599 PI4KBQ9UBF8 816 aa15.44■□□□□ 0.06
UBE3B-210ENST00000539599 LRRC37AA6NMS7 1700 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 NRXN2Q9P2S2 1712 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 TCP10L2B9ZVM9 353 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 DDX39AO00148 427 aaKnown RBP15.43■□□□□ 0.06
UBE3B-210ENST00000539599 NPR1P16066 1061 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 PAFAH1B1P43034 410 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 NAB2Q15742 525 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 TTMPQ5BVD1 217 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 IRF2BP2Q7Z5L9 587 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 DDX42Q86XP3 938 aaKnown RBP eCLIP15.43■□□□□ 0.06
UBE3B-210ENST00000539599 RDH13Q8NBN7 331 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 CEP63Q96MT8 703 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 ZDHHC15Q96MV8 337 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 EIF2AK1Q9BQI3 630 aaKnown RBP15.43■□□□□ 0.06
UBE3B-210ENST00000539599 ARMCX3Q9UH62 379 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-210ENST00000539599 FRMD3A2A2Y4 597 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 KCNK3O14649 394 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 USP11P51784 963 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 KNOP1Q1ED39 458 aaKnown RBP15.43■□□□□ 0.06
UBE3B-210ENST00000539599 DACT2Q5SW24 774 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 SYDE2Q5VT97 1194 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 BANK1Q8NDB2 785 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 ACBD3Q9H3P7 528 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 VIPAS39Q9H9C1 493 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 VAV3Q9UKW4 847 aa15.43■□□□□ 0.06
UBE3B-210ENST00000539599 GREB1LQ9C091 1923 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-210ENST00000539599 GOLGA6CA6NDK9 693 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 RBAK-RBAKDNI3L0D1 243 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 MYO1CO00159 1063 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 TULP2O00295 520 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 GOLGA6DP0CG33 693 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 ATP1A2P50993 1020 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 DYDC2Q96IM9 177 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 GOLGA6AQ9NYA3 693 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 TISP43B9A030 160 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 NR3C1P04150 777 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 TUBBP07437 444 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 TRIM49P0CI25 452 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 TRIM49CP0CI26 452 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 EXOC3L4Q17RC7 722 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 IQCEQ6IPM2 695 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 SYT2Q8N9I0 419 aaPredicted RBP15.42■□□□□ 0.06
UBE3B-210ENST00000539599 CASKIN2Q8WXE0 1202 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 PRR12Q9ULL5 1215 aa15.42■□□□□ 0.06
UBE3B-210ENST00000539599 RRP15Q9Y3B9 282 aaKnown RBP15.42■□□□□ 0.06
UBE3B-210ENST00000539599 COL11A2P13942 1736 aaPredicted RBP15.42■□□□□ 0.06
UBE3B-210ENST00000539599 CYP3A7-CYP3A51PA0A087WV96 503 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 RAD51CO43502 376 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 GFPT2O94808 682 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 CYP3A7P24462 503 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 RPA1P27694 616 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 HSPA1LP34931 641 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 CFAP221Q4G0U5 840 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 DCAF4Q8WV16 495 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 CCDC17Q96LX7 622 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 ZIM3Q96PE6 472 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 CSRNP1Q96S65 589 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 GCNT4Q9P109 453 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 NYAP2Q9P242 653 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 CHORDC1Q9UHD1 332 aaPredicted RBP15.41■□□□□ 0.06
UBE3B-210ENST00000539599 FEZ2Q9UHY8 353 aaPredicted RBP15.41■□□□□ 0.06
UBE3B-210ENST00000539599 AFPP02771 609 aaKnown RBP15.41■□□□□ 0.06
UBE3B-210ENST00000539599 BMP3P12645 472 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 XRCC5P13010 732 aaKnown RBP15.41■□□□□ 0.06
UBE3B-210ENST00000539599 MEI1Q5TIA1 1274 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 CCDC70Q6NSX1 233 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 SLFN12Q8IYM2 578 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 MSL3Q8N5Y2 521 aaKnown RBP15.41■□□□□ 0.06
UBE3B-210ENST00000539599 GOLGA6L1Q8N7Z2 621 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 MKL1Q969V6 931 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 ELMO3Q96BJ8 720 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 CCDC43Q96MW1 224 aaKnown RBP15.41■□□□□ 0.06
UBE3B-210ENST00000539599 MBOAT7Q96N66 472 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 SIX2Q9NPC8 291 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 FBXO28Q9NVF7 368 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 SUGT1Q9Y2Z0 365 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 TGFB1I1O43294 461 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 MCM3P25205 808 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 CYP2J2P51589 502 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 SRLQ86TD4 932 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 GLIS2Q9BZE0 524 aaPredicted RBP15.41■□□□□ 0.06
UBE3B-210ENST00000539599 RABGAP1Q9Y3P9 1069 aa15.41■□□□□ 0.06
UBE3B-210ENST00000539599 PRLRP16471 622 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 COPB2P35606 906 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 SREBF1P36956 1147 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 DGKZQ13574 1117 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 NAA35Q5VZE5 725 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 RINT1Q6NUQ1 792 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 TATDN1Q6P1N9 297 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 MIGA2Q7L4E1 593 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 EPM2AIP1Q7L775 607 aaPredicted RBP15.4■□□□□ 0.06
UBE3B-210ENST00000539599 ZNF572Q7Z3I7 529 aaPredicted RBP15.4■□□□□ 0.06
UBE3B-210ENST00000539599 ADAT2Q7Z6V5 191 aaKnown RBP15.4■□□□□ 0.06
UBE3B-210ENST00000539599 MYCT1Q8N699 235 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 SLC35C1Q96A29 364 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 IQCDQ96DY2 449 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms