RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 MEIS1O00470 390 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 USP11P51784 963 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 GSTO1P78417 241 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 SCFD2Q8WU76 684 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 CRAMP1Q96RY5 1269 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 BMP2KQ9NSY1 1161 aaPredicted RBP22.18■■□□□ 1.14
TMEM260-203ENST00000539559 HDAC9Q9UKV0 1011 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 POTEFA5A3E0 1075 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 KRIT1O00522 736 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 TTI1O43156 1089 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 UFL1O94874 794 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 POTEIP0CG38 1075 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 COPB2P35606 906 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 POTEGQ6S5H5 508 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 POTEEQ6S8J3 1075 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 MICALCLQ6ZW33 695 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 NLGN1Q8N2Q7 840 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 ZNF287Q9HBT7 754 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 DDX20Q9UHI6 824 aaKnown RBP22.18■■□□□ 1.14
TMEM260-203ENST00000539559 GGA1Q9UJY5 639 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 NAGPAQ9UK23 515 aa22.18■■□□□ 1.14
TMEM260-203ENST00000539559 KLRG2A4D1S0 409 aaPredicted RBP22.17■■□□□ 1.14
TMEM260-203ENST00000539559 RAD21O60216 631 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 TCERG1LQ5VWI1 586 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 ALKBH5Q6P6C2 394 aaKnown RBP22.17■■□□□ 1.14
TMEM260-203ENST00000539559 LRRC57Q8N9N7 239 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 CEP63Q96MT8 703 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 IKZF4Q9H2S9 585 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 NR2E1Q9Y466 385 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 USP17L15C9J2P7 530 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 USP17L13C9JLJ4 530 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 USP17L11C9JVI0 530 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 USP17L18D6R9N7 530 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 USP17L22D6RA61 530 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 USP17L17D6RBQ6 530 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 USP17L19D6RCP7 530 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 USP17L20D6RJB6 530 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 AKR1B1P15121 316 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 UCHL3P15374 230 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 CYP11B2P19099 503 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 USP17L24Q0WX57 530 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 USP17L6PQ6QN14 398 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 CCDC65Q8IXS2 484 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 MYCBPQ99417 103 aaPredicted RBP22.17■■□□□ 1.14
TMEM260-203ENST00000539559 JMJD4Q9H9V9 463 aa22.17■■□□□ 1.14
TMEM260-203ENST00000539559 ACTN3Q08043 901 aaPredicted RBP22.16■■□□□ 1.14
TMEM260-203ENST00000539559 ARSHQ5FYA8 562 aa22.16■■□□□ 1.14
TMEM260-203ENST00000539559 EMC10Q5UCC4 262 aa22.16■■□□□ 1.14
TMEM260-203ENST00000539559 ADGRF4Q8IZF3 695 aa22.16■■□□□ 1.14
TMEM260-203ENST00000539559 AKT1S1Q96B36 256 aa22.16■■□□□ 1.14
TMEM260-203ENST00000539559 TRIM51Q9BSJ1 452 aa22.16■■□□□ 1.14
TMEM260-203ENST00000539559 SLC12A6Q9UHW9 1150 aa22.16■■□□□ 1.14
TMEM260-203ENST00000539559 PSMC6P62333 389 aa22.16■■□□□ 1.14
TMEM260-203ENST00000539559 DPP8Q6V1X1 898 aaPredicted RBP22.16■■□□□ 1.14
TMEM260-203ENST00000539559 MDM1Q8TC05 714 aa22.16■■□□□ 1.14
TMEM260-203ENST00000539559 LRRC27Q9C0I9 530 aa22.16■■□□□ 1.14
TMEM260-203ENST00000539559 VCPKMTQ9H867 229 aa22.16■■□□□ 1.14
TMEM260-203ENST00000539559 GEMIN8Q9NWZ8 242 aaKnown RBP22.16■■□□□ 1.14
TMEM260-203ENST00000539559 GMNCA6NCL1 334 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 PGRMC1O00264 195 aaKnown RBP22.15■■□□□ 1.14
TMEM260-203ENST00000539559 MED24O75448 989 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 MAGOHP61326 146 aaKnown RBP22.15■■□□□ 1.14
TMEM260-203ENST00000539559 DPY19L2P1Q6NXN4 242 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 KCTD1Q719H9 257 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 PEX26Q7Z412 305 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 CCDC91Q7Z6B0 441 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 TPCN2Q8NHX9 752 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 MAGOHBQ96A72 148 aaKnown RBP22.15■■□□□ 1.14
TMEM260-203ENST00000539559 PHF20L1A8MW92 1017 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 CETN3O15182 167 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 LDHCP07864 332 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 ORC2Q13416 577 aaPredicted RBP22.15■■□□□ 1.14
TMEM260-203ENST00000539559 C6orf89Q6UWU4 347 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 COL23A1Q86Y22 540 aaPredicted RBP22.15■■□□□ 1.14
TMEM260-203ENST00000539559 OSBPL7Q9BZF2 842 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 MTMR4Q9NYA4 1195 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 ATXN2Q99700 1313 aaKnown RBP22.15■■□□□ 1.14
TMEM260-203ENST00000539559 MYH7BA7E2Y1 1941 aa22.15■■□□□ 1.14
TMEM260-203ENST00000539559 USP17L10C9JJH3 530 aa22.14■■□□□ 1.14
TMEM260-203ENST00000539559 DNM1LO00429 736 aa22.14■■□□□ 1.14
TMEM260-203ENST00000539559 PON1P27169 355 aa22.14■■□□□ 1.14
TMEM260-203ENST00000539559 USP8P40818 1118 aa22.14■■□□□ 1.14
TMEM260-203ENST00000539559 PPP4R3AQ6IN85 833 aa22.14■■□□□ 1.14
TMEM260-203ENST00000539559 CASP4P49662 377 aa22.14■■□□□ 1.13
TMEM260-203ENST00000539559 RHBDL3P58872 404 aa22.14■■□□□ 1.13
TMEM260-203ENST00000539559 DAAM2Q86T65 1068 aa22.14■■□□□ 1.13
TMEM260-203ENST00000539559 SPATS2Q86XZ4 545 aaKnown RBP22.14■■□□□ 1.13
TMEM260-203ENST00000539559 FLAD1Q8NFF5 587 aa22.14■■□□□ 1.13
TMEM260-203ENST00000539559 RAPGEF5Q92565 580 aa22.14■■□□□ 1.13
TMEM260-203ENST00000539559 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.14■■□□□ 1.13
TMEM260-203ENST00000539559 CD209Q9NNX6 404 aa22.14■■□□□ 1.13
TMEM260-203ENST00000539559 SLC40A1Q9NP59 571 aa22.14■■□□□ 1.13
TMEM260-203ENST00000539559 OSGEPQ9NPF4 335 aa22.14■■□□□ 1.13
TMEM260-203ENST00000539559 GNA14O95837 355 aa22.14■■□□□ 1.13
TMEM260-203ENST00000539559 ZBTB48P10074 688 aaPredicted RBP22.14■■□□□ 1.13
TMEM260-203ENST00000539559 RXRBP28702 533 aa22.14■■□□□ 1.13
TMEM260-203ENST00000539559 DHX9Q08211 1270 aaKnown RBP22.14■■□□□ 1.13
TMEM260-203ENST00000539559 PABPC4Q13310 644 aaKnown RBP eCLIP22.14■■□□□ 1.13
TMEM260-203ENST00000539559 U2AF1L4Q8WU68 220 aaKnown RBP22.14■■□□□ 1.13
TMEM260-203ENST00000539559 CCDC114Q96M63 670 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms