RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 UBXN11Q5T124 520 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 MMS22LQ6ZRQ5 1243 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 DDX46Q7L014 1031 aaKnown RBP4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 STRA8Q7Z7C7 330 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 CREBRFQ8IUR6 639 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 AHI1Q8N157 1196 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 SYT8Q8NBV8 401 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 WDR66Q8TBY9 1149 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 SECISBP2LQ93073 1101 aaKnown RBP4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 PPP1R14AQ96A00 147 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 DHRS1Q96LJ7 313 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 DLC1Q96QB1 1528 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 PUS7LQ9H0K6 701 aaKnown RBP4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 PLCB1Q9NQ66 1216 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 INTS7Q9NVH2 962 aaKnown RBP4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 CACNA2D2Q9NY47 1150 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 GMIPQ9P107 970 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 MBD1Q9UIS9 605 aaPredicted RBP4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 CNOT11Q9UKZ1 510 aaKnown RBP4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 MAST1Q9Y2H9 1570 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 NUB1Q9Y5A7 615 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 SNCAIPQ9Y6H5 919 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 ADAMTS7Q9UKP4 1686 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 ATP7AQ04656 1500 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 CAMSAP2Q08AD1 1489 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 DISP2A7MBM2 1401 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 B2RBV5 119 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 OVOL3O00110 214 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 ABLIM1O14639 778 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 PLD2O14939 933 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 GPR39O43194 453 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 ADCY3O60266 1144 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 CT47B1P0C2W7 299 aaPredicted RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 HSPA1AP0DMV8 641 aaKnown RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 HSPA1BP0DMV9 641 aaKnown RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 ZSCAN20P17040 1043 aaPredicted RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 PLCG1P19174 1290 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 HTRA3P83110 453 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 CBX2Q14781 532 aaPredicted RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 SLC14A2Q15849 920 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 NKG7Q16617 165 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 LONRF1Q17RB8 773 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 GNPTABQ3T906 1256 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 SV2CQ496J9 727 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 KIAA1211LQ6NV74 962 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 PDXDC1Q6P996 788 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 LRFN4Q6PJG9 635 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 HHIPL2Q6UWX4 724 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 RUFY4Q6ZNE9 571 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 SUGP1Q8IWZ8 645 aaKnown RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 TAB3Q8N5C8 712 aaPredicted RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 ZBTB38Q8NAP3 1195 aaPredicted RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 GJA10Q969M2 543 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 TIFAQ96CG3 184 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 NCOA5Q9HCD5 579 aaKnown RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 USP40Q9NVE5 1235 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 C9orf78Q9NZ63 289 aaPredicted RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 EVLQ9UI08 416 aaPredicted RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 HDAC9Q9UKV0 1011 aa4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 CTDP1Q9Y5B0 961 aaPredicted RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.58□□□□□ -1.68
AC055720.1-201ENST00000539552 IQGAP2Q13576 1575 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 BAHCC1Q9P281 2608 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 TRAV20A0A0B4J274 112 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 WASH4PA8MWX3 477 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 SUSD5O60279 629 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 BRINP1O60477 761 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 HTR3BO95264 441 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 FSHBP01225 129 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 RBP3P10745 1247 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 RAG1P15918 1043 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 RRM1P23921 792 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 FLT3P36888 993 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 KCNC1P48547 511 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 TERF1P54274 439 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 YARSP54577 528 aaKnown RBP4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 GJA9P57773 515 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 GPSM2P81274 684 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 KRTAP1-1Q07627 177 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 TCIRG1Q13488 830 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 BIRC3Q13489 604 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 GBX1Q14549 363 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 HSP90AA2PQ14568 343 aaPredicted RBP4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 RTP5Q14D33 572 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 ALDH1L2Q3SY69 923 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 WIPI1Q5MNZ9 446 aaPredicted RBP4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 C1QTNF12Q5T7M4 302 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 INTS3Q68E01 1043 aaKnown RBP4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 CNNM4Q6P4Q7 775 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 NLRC3Q7RTR2 1065 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 LRRTM3Q86VH5 581 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 TSPYL5Q86VY4 417 aaPredicted RBP4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 SPATS2Q86XZ4 545 aaKnown RBP4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 PPM1KQ8N3J5 372 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 TTC30BQ8N4P2 665 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 LINC01356Q8N9X3 169 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 VPS37AQ8NEZ2 397 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 USP33Q8TEY7 942 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 PLPPR2Q96GM1 343 aa4.57□□□□□ -1.68
AC055720.1-201ENST00000539552 SERINC2Q96SA4 455 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms