RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 POTEBQ6S5H4 581 aa25.22■■□□□ 1.63
SCARB1-206ENST00000539320 CCDC60Q8IWA6 550 aaPredicted RBP25.22■■□□□ 1.63
SCARB1-206ENST00000539320 ZNF577Q9BSK1 485 aa25.22■■□□□ 1.63
SCARB1-206ENST00000539320 UPP2O95045 317 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 CIITAP33076 1130 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 TSHZ1Q6ZSZ6 1077 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 ATP8B4Q8TF62 1192 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 UIMC1Q96RL1 719 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 SUGCTQ9HAC7 445 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 ZNF302Q9NR11 478 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 SH3GLB2Q9NR46 395 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 TBC1D22BQ9NU19 505 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 PPP4R2Q9NY27 417 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 TCEAL9Q9UHQ7 104 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 PCDHA2Q9Y5H9 948 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 TRPV2Q9Y5S1 764 aa25.21■■□□□ 1.63
SCARB1-206ENST00000539320 M0QZ92 97 aa25.2■■□□□ 1.62
SCARB1-206ENST00000539320 CPLX1O14810 134 aa25.2■■□□□ 1.62
SCARB1-206ENST00000539320 HBP1O60381 514 aa25.2■■□□□ 1.62
SCARB1-206ENST00000539320 PRR16Q569H4 304 aa25.2■■□□□ 1.62
SCARB1-206ENST00000539320 IER5Q5VY09 327 aa25.2■■□□□ 1.62
SCARB1-206ENST00000539320 PDXDC2PQ6P474 469 aa25.2■■□□□ 1.62
SCARB1-206ENST00000539320 IL27Q8NEV9 243 aa25.2■■□□□ 1.62
SCARB1-206ENST00000539320 FBXO22Q8NEZ5 403 aa25.2■■□□□ 1.62
SCARB1-206ENST00000539320 ZNF274Q96GC6 653 aaPredicted RBP25.2■■□□□ 1.62
SCARB1-206ENST00000539320 C17orf80Q9BSJ5 609 aa25.2■■□□□ 1.62
SCARB1-206ENST00000539320 LMCD1Q9NZU5 365 aa25.2■■□□□ 1.62
SCARB1-206ENST00000539320 NLRP5P59047 1200 aa25.19■■□□□ 1.62
SCARB1-206ENST00000539320 SSRP1Q08945 709 aaKnown RBP25.19■■□□□ 1.62
SCARB1-206ENST00000539320 ZNF746Q6NUN9 644 aaPredicted RBP25.19■■□□□ 1.62
SCARB1-206ENST00000539320 SAMD11Q96NU1 681 aa25.19■■□□□ 1.62
SCARB1-206ENST00000539320 PDRG1Q9NUG6 133 aa25.19■■□□□ 1.62
SCARB1-206ENST00000539320 COL1A2P08123 1366 aa25.18■■□□□ 1.62
SCARB1-206ENST00000539320 SMIM35A0A1B0GVV1 85 aa25.18■■□□□ 1.62
SCARB1-206ENST00000539320 KRT76Q01546 638 aa25.18■■□□□ 1.62
SCARB1-206ENST00000539320 CPLX2Q6PUV4 134 aaKnown RBP25.18■■□□□ 1.62
SCARB1-206ENST00000539320 MTHFD1LQ6UB35 978 aa25.18■■□□□ 1.62
SCARB1-206ENST00000539320 SMAP1Q8IYB5 467 aaPredicted RBP25.18■■□□□ 1.62
SCARB1-206ENST00000539320 LENG9Q96B70 501 aa25.18■■□□□ 1.62
SCARB1-206ENST00000539320 LARP6Q9BRS8 491 aaKnown RBP25.18■■□□□ 1.62
SCARB1-206ENST00000539320 DEXIO95424 95 aa25.17■■□□□ 1.62
SCARB1-206ENST00000539320 CD52P31358 61 aa25.17■■□□□ 1.62
SCARB1-206ENST00000539320 TMEM62Q0P6H9 643 aa25.17■■□□□ 1.62
SCARB1-206ENST00000539320 SWSAP1Q6NVH7 229 aa25.17■■□□□ 1.62
SCARB1-206ENST00000539320 AGO3Q9H9G7 860 aaKnown RBP25.17■■□□□ 1.62
SCARB1-206ENST00000539320 SQORQ9Y6N5 450 aa25.17■■□□□ 1.62
SCARB1-206ENST00000539320 TTC3P53804 2025 aa25.17■■□□□ 1.62
SCARB1-206ENST00000539320 TFF2Q03403 129 aa25.16■■□□□ 1.62
SCARB1-206ENST00000539320 STK3Q13188 491 aa25.16■■□□□ 1.62
SCARB1-206ENST00000539320 AAK1Q2M2I8 961 aa25.16■■□□□ 1.62
SCARB1-206ENST00000539320 ERICH6BQ5W0A0 696 aa25.16■■□□□ 1.62
SCARB1-206ENST00000539320 ADAMTS19Q8TE59 1207 aa25.16■■□□□ 1.62
SCARB1-206ENST00000539320 C22orf23Q9BZE7 217 aa25.16■■□□□ 1.62
SCARB1-206ENST00000539320 PCDHA4Q9UN74 947 aa25.16■■□□□ 1.62
SCARB1-206ENST00000539320 COG5Q9UP83 839 aa25.16■■□□□ 1.62
SCARB1-206ENST00000539320 MYH9P35579 1960 aaKnown RBP25.16■■□□□ 1.62
SCARB1-206ENST00000539320 IGSF9BQ9UPX0 1349 aa25.15■■□□□ 1.62
SCARB1-206ENST00000539320 KDM3AQ9Y4C1 1321 aa25.15■■□□□ 1.62
SCARB1-206ENST00000539320 PSAPP07602 524 aa25.15■■□□□ 1.62
SCARB1-206ENST00000539320 KLRC1P26715 233 aa25.15■■□□□ 1.62
SCARB1-206ENST00000539320 EPC2Q52LR7 807 aa25.15■■□□□ 1.62
SCARB1-206ENST00000539320 ZNF484Q5JVG2 852 aa25.15■■□□□ 1.62
SCARB1-206ENST00000539320 CKAP2LQ8IYA6 745 aa25.15■■□□□ 1.62
SCARB1-206ENST00000539320 NME8Q8N427 588 aa25.15■■□□□ 1.62
SCARB1-206ENST00000539320 LINC01599Q8WXQ3 324 aa25.15■■□□□ 1.62
SCARB1-206ENST00000539320 CELF4Q9BZC1 486 aaKnown RBP25.15■■□□□ 1.62
SCARB1-206ENST00000539320 WDR64B1ANS9 1081 aa25.14■■□□□ 1.62
SCARB1-206ENST00000539320 ENPP3O14638 875 aa25.14■■□□□ 1.62
SCARB1-206ENST00000539320 ATP4AP20648 1035 aa25.14■■□□□ 1.62
SCARB1-206ENST00000539320 PAK2Q13177 524 aa25.14■■□□□ 1.62
SCARB1-206ENST00000539320 FAM177A1Q8N128 213 aaPredicted RBP25.14■■□□□ 1.62
SCARB1-206ENST00000539320 IL17RAQ96F46 866 aa25.14■■□□□ 1.62
SCARB1-206ENST00000539320 FTHL17Q9BXU8 183 aa25.14■■□□□ 1.62
SCARB1-206ENST00000539320 PCDHA10Q9Y5I2 948 aa25.14■■□□□ 1.62
SCARB1-206ENST00000539320 MAFBQ9Y5Q3 323 aaPredicted RBP25.14■■□□□ 1.62
SCARB1-206ENST00000539320 NLRC5Q86WI3 1866 aa25.14■■□□□ 1.61
SCARB1-206ENST00000539320 ADGRA3Q8IWK6 1321 aa25.13■■□□□ 1.61
SCARB1-206ENST00000539320 RALGAPA2Q2PPJ7 1873 aa25.13■■□□□ 1.61
SCARB1-206ENST00000539320 ZBTB42B2RXF5 422 aa25.13■■□□□ 1.61
SCARB1-206ENST00000539320 EDIL3O43854 480 aa25.13■■□□□ 1.61
SCARB1-206ENST00000539320 USP11P51784 963 aa25.13■■□□□ 1.61
SCARB1-206ENST00000539320 TMEM192Q8IY95 271 aa25.13■■□□□ 1.61
SCARB1-206ENST00000539320 FIBCD1Q8N539 461 aa25.13■■□□□ 1.61
SCARB1-206ENST00000539320 DAGLBQ8NCG7 672 aa25.13■■□□□ 1.61
SCARB1-206ENST00000539320 TBCKQ8TEA7 893 aa25.13■■□□□ 1.61
SCARB1-206ENST00000539320 BBXQ8WY36 941 aaPredicted RBP25.13■■□□□ 1.61
SCARB1-206ENST00000539320 UHRF1Q96T88 793 aaPredicted RBP25.13■■□□□ 1.61
SCARB1-206ENST00000539320 RC3H2Q9HBD1 1191 aaKnown RBP25.13■■□□□ 1.61
SCARB1-206ENST00000539320 GABBR1Q9UBS5 961 aa25.13■■□□□ 1.61
SCARB1-206ENST00000539320 LOXHD1Q8IVV2 1947 aa25.13■■□□□ 1.61
SCARB1-206ENST00000539320 MSH4O15457 936 aa25.12■■□□□ 1.61
SCARB1-206ENST00000539320 BLIDQ8IZY5 108 aa25.12■■□□□ 1.61
SCARB1-206ENST00000539320 HLA-CQ95604 372 aa25.12■■□□□ 1.61
SCARB1-206ENST00000539320 FAM167AQ96KS9 214 aa25.12■■□□□ 1.61
SCARB1-206ENST00000539320 AIFM3Q96NN9 605 aa25.12■■□□□ 1.61
SCARB1-206ENST00000539320 PADI3Q9ULW8 664 aa25.12■■□□□ 1.61
SCARB1-206ENST00000539320 SAMM50Q9Y512 469 aa25.12■■□□□ 1.61
SCARB1-206ENST00000539320 REV3LO60673 3130 aa25.12■■□□□ 1.61
SCARB1-206ENST00000539320 TNFRSF10AO00220 468 aa25.11■■□□□ 1.61
SCARB1-206ENST00000539320 GAS7O60861 476 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms