RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 SHCBP1Q8NEM2 672 aa3.23□□□□□ -1.89
CBX3P4-201ENST00000538909 MICAL1Q8TDZ2 1067 aa3.23□□□□□ -1.89
CBX3P4-201ENST00000538909 HAS1Q92839 578 aa3.23□□□□□ -1.89
CBX3P4-201ENST00000538909 ZDHHC5Q9C0B5 715 aa3.23□□□□□ -1.89
CBX3P4-201ENST00000538909 CDIP1Q9H305 208 aa3.23□□□□□ -1.89
CBX3P4-201ENST00000538909 AGO3Q9H9G7 860 aaKnown RBP3.23□□□□□ -1.89
CBX3P4-201ENST00000538909 LRP2BPQ9P2M1 347 aa3.23□□□□□ -1.89
CBX3P4-201ENST00000538909 PACSIN3Q9UKS6 424 aa3.23□□□□□ -1.89
CBX3P4-201ENST00000538909 EFR3BQ9Y2G0 817 aa3.23□□□□□ -1.89
CBX3P4-201ENST00000538909 SMARCA2P51531 1590 aa3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 RSF1Q96T23 1441 aaPredicted RBP3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 PTGS2P35354 604 aa3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 DPP8Q6V1X1 898 aaPredicted RBP3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 OTOP3Q7RTS5 596 aa3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 FILIP1Q7Z7B0 1213 aa3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 ZNF227Q86WZ6 799 aa3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 TMEM87AQ8NBN3 555 aa3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 TMEM145Q8NBT3 493 aa3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 KCNJ15Q99712 375 aa3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 MLST8Q9BVC4 326 aa3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 FAM184BQ9ULE4 1060 aa3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 SH3BP1Q9Y3L3 701 aa3.22□□□□□ -1.89
CBX3P4-201ENST00000538909 WIZO95785 1651 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 PATL2C9JE40 543 aaKnown RBP3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 ACOT7O00154 380 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 KIAA0355O15063 1070 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 SLC26A4O43511 780 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 MSCO60682 206 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 CPP00450 1065 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 SCG5P05408 212 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 MRE11P49959 708 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 ZNF143P52747 638 aaPredicted RBP3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 TOB2Q14106 344 aaPredicted RBP3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 MRPL58Q14197 206 aaKnown RBP3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 TESK1Q15569 626 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 SV2CQ496J9 727 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 RTKN2Q8IZC4 609 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 OR6P1Q8NGX9 317 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 UHMK1Q8TAS1 419 aaKnown RBP3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 SLC25A43Q8WUT9 341 aaPredicted RBP3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 OR10A2Q9H208 303 aa3.21□□□□□ -1.9
CBX3P4-201ENST00000538909 NKRFO15226 690 aaKnown RBP eCLIP3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 GNAT1P11488 350 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 ZNF76P36508 570 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 MAN2A2P49641 1150 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 MEOX1P50221 254 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 GFRA1P56159 465 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 IL13RA1P78552 427 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 ZNF662Q6ZS27 426 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 OTOP2Q7RTS6 562 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 ANKRD35Q8N283 1001 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 PROKR1Q8TCW9 393 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 CD244Q9BZW8 370 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 MSL2Q9HCI7 577 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 ARHGAP28Q9P2N2 729 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 NUB1Q9Y5A7 615 aa3.2□□□□□ -1.9
CBX3P4-201ENST00000538909 TOP2AP11388 1531 aaKnown RBP3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 A0A1W2PRX2 142 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 STAT3P40763 770 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 SOX9P48436 509 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 HGFACQ04756 655 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 SPIRE1Q08AE8 756 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 DBPQ10586 325 aaPredicted RBP3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 RIN1Q13671 783 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 COL9A2Q14055 689 aaPredicted RBP3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 PTPAQ15257 358 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 HECTD2Q5U5R9 776 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 SP5Q6BEB4 398 aaPredicted RBP3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 OLFML1Q6UWY5 402 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 KCTD1Q719H9 257 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 RD3Q7Z3Z2 195 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 SYNE4Q8N205 404 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 ZNF276Q8N554 614 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 C1orf159Q96HA4 380 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 CCDC140Q96MF4 163 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 MPHOSPH9Q99550 1183 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 GPR87Q9BY21 358 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 SYNPO2LQ9H987 977 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 DSEQ9UL01 958 aa3.19□□□□□ -1.9
CBX3P4-201ENST00000538909 GRID2IPA4D2P6 1211 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 PROB1E7EW31 1015 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 TRAF5O00463 557 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 ABHD16AO95870 558 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 CASP7P55210 303 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 PAK2Q13177 524 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 NCAPHQ15003 741 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 LY6G5CQ5SRR4 150 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 ERICH6Q7L0X2 663 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 BEND2Q8NDZ0 799 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 CPLX3Q8WVH0 158 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 PGBD4Q96DM1 585 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 PHF20Q9BVI0 1012 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 R3HDMLQ9H3Y0 253 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 RSAD1Q9HA92 442 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 NPFFR2Q9Y5X5 522 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 SPATA31A6Q5VVP1 1343 aa3.18□□□□□ -1.9
CBX3P4-201ENST00000538909 GRK2P25098 689 aa3.17□□□□□ -1.9
CBX3P4-201ENST00000538909 GRK3P35626 688 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms