RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 TCTN1Q2MV58 587 aa15.49■□□□□ 0.07
CD9-208ENST00000538834 FAM109BQ6ICB4 259 aaPredicted RBP15.49■□□□□ 0.07
CD9-208ENST00000538834 POTEBQ6S5H4 581 aa15.49■□□□□ 0.07
CD9-208ENST00000538834 RUFY4Q6ZNE9 571 aa15.49■□□□□ 0.07
CD9-208ENST00000538834 LINC01465Q8N7H1 131 aa15.49■□□□□ 0.07
CD9-208ENST00000538834 RETREG2Q8NC44 543 aa15.49■□□□□ 0.07
CD9-208ENST00000538834 OSBPL7Q9BZF2 842 aa15.49■□□□□ 0.07
CD9-208ENST00000538834 BRMS1Q9HCU9 246 aa15.49■□□□□ 0.07
CD9-208ENST00000538834 CXXC1Q9P0U4 656 aaPredicted RBP15.49■□□□□ 0.07
CD9-208ENST00000538834 NOD1Q9Y239 953 aa15.49■□□□□ 0.07
CD9-208ENST00000538834 PCDHA2Q9Y5H9 948 aa15.49■□□□□ 0.07
CD9-208ENST00000538834 CDH23Q9H251 3354 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 KIF28PB7ZC32 967 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 EML1O00423 815 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 CCNT1O60563 726 aaKnown RBP15.48■□□□□ 0.07
CD9-208ENST00000538834 GAS7O60861 476 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 SLC34A2O95436 690 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 GUCY1B3Q02153 619 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 TRIM29Q14134 588 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 TARBP2Q15633 366 aaKnown RBP15.48■□□□□ 0.07
CD9-208ENST00000538834 UGCGQ16739 394 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 FAM160B1Q5W0V3 765 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 TAF2Q6P1X5 1199 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 BBXQ8WY36 941 aaPredicted RBP15.48■□□□□ 0.07
CD9-208ENST00000538834 TNPO1Q92973 898 aaKnown RBP15.48■□□□□ 0.07
CD9-208ENST00000538834 TUBE1Q9UJT0 475 aa15.48■□□□□ 0.07
CD9-208ENST00000538834 KDM3AQ9Y4C1 1321 aa15.47■□□□□ 0.07
CD9-208ENST00000538834 SMIM35A0A1B0GVV1 85 aa15.47■□□□□ 0.07
CD9-208ENST00000538834 CHRNA1P02708 482 aa15.47■□□□□ 0.07
CD9-208ENST00000538834 RPLP2P05387 115 aaKnown RBP15.47■□□□□ 0.07
CD9-208ENST00000538834 ORC2Q13416 577 aaPredicted RBP15.47■□□□□ 0.07
CD9-208ENST00000538834 PLEKHG4Q58EX7 1191 aa15.47■□□□□ 0.07
CD9-208ENST00000538834 ZNF484Q5JVG2 852 aa15.47■□□□□ 0.07
CD9-208ENST00000538834 PDXDC2PQ6P474 469 aa15.47■□□□□ 0.07
CD9-208ENST00000538834 MTHFD1LQ6UB35 978 aa15.47■□□□□ 0.07
CD9-208ENST00000538834 C4orf32Q8N8J7 132 aa15.47■□□□□ 0.07
CD9-208ENST00000538834 RNPC3Q96LT9 517 aaKnown RBP15.47■□□□□ 0.07
CD9-208ENST00000538834 NIFKQ9BYG3 293 aaKnown RBP15.47■□□□□ 0.07
CD9-208ENST00000538834 GABBR1Q9UBS5 961 aa15.47■□□□□ 0.07
CD9-208ENST00000538834 COL6A3P12111 3177 aa15.46■□□□□ 0.07
CD9-208ENST00000538834 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.46■□□□□ 0.07
CD9-208ENST00000538834 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.46■□□□□ 0.07
CD9-208ENST00000538834 RSPH10B2B2RC85 870 aa15.46■□□□□ 0.07
CD9-208ENST00000538834 RSPH10BP0C881 870 aa15.46■□□□□ 0.07
CD9-208ENST00000538834 TRAPPC10P48553 1259 aa15.46■□□□□ 0.07
CD9-208ENST00000538834 TOB1P50616 345 aaPredicted RBP15.46■□□□□ 0.07
CD9-208ENST00000538834 NOSTRINQ8IVI9 506 aa15.46■□□□□ 0.07
CD9-208ENST00000538834 SLFN12Q8IYM2 578 aa15.46■□□□□ 0.07
CD9-208ENST00000538834 TRAPPC12Q8WVT3 735 aa15.46■□□□□ 0.07
CD9-208ENST00000538834 SNX21Q969T3 373 aa15.46■□□□□ 0.07
CD9-208ENST00000538834 TMEM60Q9H2L4 133 aa15.46■□□□□ 0.07
CD9-208ENST00000538834 SQORQ9Y6N5 450 aa15.46■□□□□ 0.07
CD9-208ENST00000538834 NLRC5Q86WI3 1866 aa15.46■□□□□ 0.06
CD9-208ENST00000538834 IGKV6-21A0A0C4DH24 114 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 BACH1O14867 736 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 BAIAP3O94812 1187 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 C22orf31O95567 290 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 KLRC1P26715 233 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 GJB2P29033 226 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 THPOP40225 353 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 SAFBQ15424 915 aaKnown RBP eCLIP15.45■□□□□ 0.06
CD9-208ENST00000538834 CNKSR3Q6P9H4 555 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 OTOP2Q7RTS6 562 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 MIER3Q7Z3K6 550 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 DEFB128Q7Z7B8 93 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 KIAA0319LQ8IZA0 1049 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 NME8Q8N427 588 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 FAM184AQ8NB25 1140 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 ZBTB10Q96DT7 871 aa15.45■□□□□ 0.06
CD9-208ENST00000538834 FNDC1Q4ZHG4 1894 aaPredicted RBP15.44■□□□□ 0.06
CD9-208ENST00000538834 RBAK-RBAKDNI3L0D1 243 aa15.44■□□□□ 0.06
CD9-208ENST00000538834 OATP04181 439 aa15.44■□□□□ 0.06
CD9-208ENST00000538834 FOSBP53539 338 aa15.44■□□□□ 0.06
CD9-208ENST00000538834 EPHA7Q15375 998 aa15.44■□□□□ 0.06
CD9-208ENST00000538834 PHOSPHO2Q8TCD6 241 aa15.44■□□□□ 0.06
CD9-208ENST00000538834 DNAJB3Q8WWF6 145 aa15.44■□□□□ 0.06
CD9-208ENST00000538834 INTS4Q96HW7 963 aaKnown RBP15.44■□□□□ 0.06
CD9-208ENST00000538834 FAM167AQ96KS9 214 aa15.44■□□□□ 0.06
CD9-208ENST00000538834 HSD17B14Q9BPX1 270 aa15.44■□□□□ 0.06
CD9-208ENST00000538834 WRAP73Q9P2S5 460 aaPredicted RBP15.44■□□□□ 0.06
CD9-208ENST00000538834 TRPC6Q9Y210 931 aa15.44■□□□□ 0.06
CD9-208ENST00000538834 COL4A6Q14031 1691 aa15.44■□□□□ 0.06
CD9-208ENST00000538834 TMEM265A0A087WTH1 108 aa15.43■□□□□ 0.06
CD9-208ENST00000538834 ABHD14A-ACY1A0A1B0GW23 586 aa15.43■□□□□ 0.06
CD9-208ENST00000538834 LYPLA2O95372 231 aa15.43■□□□□ 0.06
CD9-208ENST00000538834 PRKCEQ02156 737 aa15.43■□□□□ 0.06
CD9-208ENST00000538834 XKR3Q5GH77 459 aa15.43■□□□□ 0.06
CD9-208ENST00000538834 FBXO47Q5MNV8 452 aa15.43■□□□□ 0.06
CD9-208ENST00000538834 ANO5Q75V66 913 aa15.43■□□□□ 0.06
CD9-208ENST00000538834 C4orf19Q8IY42 314 aa15.43■□□□□ 0.06
CD9-208ENST00000538834 DBF4BQ8NFT6 615 aa15.43■□□□□ 0.06
CD9-208ENST00000538834 KIF3AQ9Y496 699 aa15.43■□□□□ 0.06
CD9-208ENST00000538834 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.43■□□□□ 0.06
CD9-208ENST00000538834 RALGAPA2Q2PPJ7 1873 aa15.43■□□□□ 0.06
CD9-208ENST00000538834 GRXCR1A8MXD5 290 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 MAGEB2O15479 319 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 CHMP2AO43633 222 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 NEMFO60524 1076 aa15.42■□□□□ 0.06
CD9-208ENST00000538834 SLITRK3O94933 977 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms